RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 IFT172Q9UG01 1749 aa16.33■□□□□ 0.2
SND1-210ENST00000483503 TESK2Q96S53 571 aa16.32■□□□□ 0.2
SND1-210ENST00000483503 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
SND1-210ENST00000483503 UGGT1Q9NYU2 1555 aa16.31■□□□□ 0.2
SND1-210ENST00000483503 AGLP35573 1532 aa16.31■□□□□ 0.2
SND1-210ENST00000483503 NRXN1Q9ULB1 1477 aa16.31■□□□□ 0.2
SND1-210ENST00000483503 RALBP1Q15311 655 aa16.3■□□□□ 0.2
SND1-210ENST00000483503 MRS2Q9HD23 443 aa16.3■□□□□ 0.2
SND1-210ENST00000483503 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
SND1-210ENST00000483503 MROH2AA6NES4 1674 aa16.29■□□□□ 0.2
SND1-210ENST00000483503 CHGAP10645 457 aaKnown RBP16.28■□□□□ 0.2
SND1-210ENST00000483503 PIK3C2BO00750 1634 aa16.27■□□□□ 0.2
SND1-210ENST00000483503 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
SND1-210ENST00000483503 PPLO60437 1756 aa16.26■□□□□ 0.19
SND1-210ENST00000483503 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
SND1-210ENST00000483503 KIF13AQ9H1H9 1805 aa16.25■□□□□ 0.19
SND1-210ENST00000483503 ADGRF5Q8IZF2 1346 aa16.24■□□□□ 0.19
SND1-210ENST00000483503 CFAP65Q6ZU64 1925 aaKnown RBP16.24■□□□□ 0.19
SND1-210ENST00000483503 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
SND1-210ENST00000483503 SYNMO15061 1565 aa16.24■□□□□ 0.19
SND1-210ENST00000483503 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
SND1-210ENST00000483503 SIGLEC1Q9BZZ2 1709 aa16.22■□□□□ 0.19
SND1-210ENST00000483503 MYBBP1AQ9BQG0 1328 aaKnown RBP16.22■□□□□ 0.19
SND1-210ENST00000483503 CFAP70Q5T0N1 1121 aa16.22■□□□□ 0.19
SND1-210ENST00000483503 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
SND1-210ENST00000483503 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
SND1-210ENST00000483503 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.19
SND1-210ENST00000483503 PIK3C2GO75747 1445 aa16.21■□□□□ 0.19
SND1-210ENST00000483503 C14orf93Q9H972 538 aaKnown RBP16.21■□□□□ 0.19
SND1-210ENST00000483503 ZFYVE9O95405 1425 aa16.2■□□□□ 0.18
SND1-210ENST00000483503 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
SND1-210ENST00000483503 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
SND1-210ENST00000483503 MYO3AQ8NEV4 1616 aa16.19■□□□□ 0.18
SND1-210ENST00000483503 CCDC184Q52MB2 194 aa16.19■□□□□ 0.18
SND1-210ENST00000483503 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
SND1-210ENST00000483503 PARD3Q8TEW0 1356 aa16.18■□□□□ 0.18
SND1-210ENST00000483503 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
SND1-210ENST00000483503 ERVK-7P63135 1459 aa16.17■□□□□ 0.18
SND1-210ENST00000483503 IDI1Q13907 227 aa16.17■□□□□ 0.18
SND1-210ENST00000483503 PANK3Q9H999 370 aa16.17■□□□□ 0.18
SND1-210ENST00000483503 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
SND1-210ENST00000483503 KDM5AP29375 1690 aaKnown RBP16.16■□□□□ 0.18
SND1-210ENST00000483503 NEFLP07196 543 aa16.16■□□□□ 0.18
SND1-210ENST00000483503 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
SND1-210ENST00000483503 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
SND1-210ENST00000483503 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
SND1-210ENST00000483503 KNSTRNQ9Y448 316 aa16.14■□□□□ 0.17
SND1-210ENST00000483503 TMEM131LA2VDJ0 1609 aa16.13■□□□□ 0.17
SND1-210ENST00000483503 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
SND1-210ENST00000483503 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
SND1-210ENST00000483503 CLTCQ00610 1675 aaKnown RBP16.12■□□□□ 0.17
SND1-210ENST00000483503 PNISRQ8TF01 805 aaKnown RBP16.12■□□□□ 0.17
SND1-210ENST00000483503 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
SND1-210ENST00000483503 CNGB1Q14028 1251 aaPredicted RBP16.11■□□□□ 0.17
SND1-210ENST00000483503 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
SND1-210ENST00000483503 SPATA31D1Q6ZQQ2 1576 aa16.11■□□□□ 0.17
SND1-210ENST00000483503 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
SND1-210ENST00000483503 SUPT16HQ9Y5B9 1047 aaKnown RBP16.1■□□□□ 0.17
SND1-210ENST00000483503 INSRP06213 1382 aa16.1■□□□□ 0.17
SND1-210ENST00000483503 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
SND1-210ENST00000483503 LRPPRCP42704 1394 aaKnown RBP16.09■□□□□ 0.17
SND1-210ENST00000483503 ASXL1Q8IXJ9 1541 aa16.08■□□□□ 0.16
SND1-210ENST00000483503 FBXO31Q5XUX0 539 aaPredicted RBP16.07■□□□□ 0.16
SND1-210ENST00000483503 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
SND1-210ENST00000483503 MYOM1P52179 1685 aa16.07■□□□□ 0.16
SND1-210ENST00000483503 QRICH2Q9H0J4 1663 aa16.06■□□□□ 0.16
SND1-210ENST00000483503 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
SND1-210ENST00000483503 MYO5BQ9ULV0 1848 aa16.05■□□□□ 0.16
SND1-210ENST00000483503 MLECQ14165 292 aa16.04■□□□□ 0.16
SND1-210ENST00000483503 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.04■□□□□ 0.16
SND1-210ENST00000483503 LMTK3Q96Q04 1460 aa16.03■□□□□ 0.16
SND1-210ENST00000483503 EVC2Q86UK5 1308 aa16.03■□□□□ 0.16
SND1-210ENST00000483503 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
SND1-210ENST00000483503 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
SND1-210ENST00000483503 TMEM132EQ6IEE7 984 aa16.03■□□□□ 0.16
SND1-210ENST00000483503 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.16
SND1-210ENST00000483503 ZMYM3Q14202 1370 aa16.02■□□□□ 0.16
SND1-210ENST00000483503 FKBP8Q14318 412 aa16.02■□□□□ 0.16
SND1-210ENST00000483503 A2ML1A8K2U0 1454 aa16.02■□□□□ 0.15
SND1-210ENST00000483503 SOCS7O14512 581 aa16.01■□□□□ 0.15
SND1-210ENST00000483503 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
SND1-210ENST00000483503 ERICH6BQ5W0A0 696 aa16■□□□□ 0.15
SND1-210ENST00000483503 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
SND1-210ENST00000483503 RIMS2Q9UQ26 1411 aa16■□□□□ 0.15
SND1-210ENST00000483503 NINLQ9Y2I6 1382 aa16■□□□□ 0.15
SND1-210ENST00000483503 FBXO41Q8TF61 875 aa15.99■□□□□ 0.15
SND1-210ENST00000483503 TNRQ92752 1358 aa15.99■□□□□ 0.15
SND1-210ENST00000483503 ALKQ9UM73 1620 aa15.98■□□□□ 0.15
SND1-210ENST00000483503 PPP2R1AP30153 589 aa15.98■□□□□ 0.15
SND1-210ENST00000483503 YTHDC2Q9H6S0 1430 aaKnown RBP15.98■□□□□ 0.15
SND1-210ENST00000483503 PDE3BQ13370 1112 aa15.96■□□□□ 0.15
SND1-210ENST00000483503 NUDCQ9Y266 331 aa15.96■□□□□ 0.15
SND1-210ENST00000483503 DLC1Q96QB1 1528 aa15.95■□□□□ 0.14
SND1-210ENST00000483503 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
SND1-210ENST00000483503 USP32Q8NFA0 1604 aa15.94■□□□□ 0.14
SND1-210ENST00000483503 POGKQ9P215 609 aa15.94■□□□□ 0.14
SND1-210ENST00000483503 PTPRMP28827 1452 aa15.93■□□□□ 0.14
SND1-210ENST00000483503 ATAD2Q6PL18 1390 aa15.93■□□□□ 0.14
SND1-210ENST00000483503 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
SND1-210ENST00000483503 WDR43Q15061 677 aaKnown RBP eCLIP15.93■□□□□ 0.146e-7■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms