RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 FOXD1Q16676 465 aa24.04■■□□□ 1.44
COL2A1-206ENST00000483376 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
COL2A1-206ENST00000483376 CHGAP10645 457 aaKnown RBP24.02■■□□□ 1.44
COL2A1-206ENST00000483376 KIF1BO60333 1816 aa24.02■■□□□ 1.44
COL2A1-206ENST00000483376 LTBP4Q8N2S1 1624 aa24.01■■□□□ 1.43
COL2A1-206ENST00000483376 ANKRD30BQ9BXX2 1392 aa24■■□□□ 1.43
COL2A1-206ENST00000483376 RPGRIP1LQ68CZ1 1315 aa23.98■■□□□ 1.43
COL2A1-206ENST00000483376 SPATA31E1Q6ZUB1 1445 aa23.98■■□□□ 1.43
COL2A1-206ENST00000483376 NEXMIFQ5QGS0 1516 aa23.97■■□□□ 1.43
COL2A1-206ENST00000483376 ZNF335Q9H4Z2 1342 aaPredicted RBP23.95■■□□□ 1.42
COL2A1-206ENST00000483376 IQSEC2Q5JU85 1478 aa23.94■■□□□ 1.42
COL2A1-206ENST00000483376 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
COL2A1-206ENST00000483376 CPS1P31327 1500 aa23.94■■□□□ 1.42
COL2A1-206ENST00000483376 ZNF326Q5BKZ1 582 aaKnown RBP23.93■■□□□ 1.42
COL2A1-206ENST00000483376 DIP2AQ14689 1571 aa23.93■■□□□ 1.42
COL2A1-206ENST00000483376 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
COL2A1-206ENST00000483376 CERKQ8TCT0 537 aa23.91■■□□□ 1.42
COL2A1-206ENST00000483376 TBX22Q9Y458 520 aa23.9■■□□□ 1.42
COL2A1-206ENST00000483376 ADAMTS13Q76LX8 1427 aa23.9■■□□□ 1.42
COL2A1-206ENST00000483376 VGFO15240 615 aaPredicted RBP23.88■■□□□ 1.41
COL2A1-206ENST00000483376 PIK3R4Q99570 1358 aa23.88■■□□□ 1.41
COL2A1-206ENST00000483376 PPLO60437 1756 aa23.86■■□□□ 1.41
COL2A1-206ENST00000483376 NRXN3Q9Y4C0 1643 aa23.85■■□□□ 1.41
COL2A1-206ENST00000483376 SLC26A8Q96RN1 970 aa23.85■■□□□ 1.41
COL2A1-206ENST00000483376 NWD1Q149M9 1564 aa23.85■■□□□ 1.41
COL2A1-206ENST00000483376 KCNA6P17658 529 aa23.83■■□□□ 1.41
COL2A1-206ENST00000483376 NUTM2DQ5VT03 806 aaPredicted RBP23.83■■□□□ 1.41
COL2A1-206ENST00000483376 IFT172Q9UG01 1749 aa23.82■■□□□ 1.4
COL2A1-206ENST00000483376 NKTRP30414 1462 aaKnown RBP23.81■■□□□ 1.4
COL2A1-206ENST00000483376 STRCP1A6NGW2 1772 aa23.81■■□□□ 1.4
COL2A1-206ENST00000483376 BCANQ96GW7 911 aa23.81■■□□□ 1.4
COL2A1-206ENST00000483376 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
COL2A1-206ENST00000483376 STAC3Q96MF2 364 aa23.79■■□□□ 1.4
COL2A1-206ENST00000483376 MYOM2P54296 1465 aa23.79■■□□□ 1.4
COL2A1-206ENST00000483376 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
COL2A1-206ENST00000483376 RGL3Q3MIN7 710 aa23.78■■□□□ 1.4
COL2A1-206ENST00000483376 NRXN1Q9ULB1 1477 aa23.77■■□□□ 1.4
COL2A1-206ENST00000483376 CHD2O14647 1828 aaKnown RBP23.77■■□□□ 1.4
COL2A1-206ENST00000483376 FBXO41Q8TF61 875 aa23.75■■□□□ 1.39
COL2A1-206ENST00000483376 PIK3C2GO75747 1445 aa23.75■■□□□ 1.39
COL2A1-206ENST00000483376 ADGRF5Q8IZF2 1346 aa23.73■■□□□ 1.39
COL2A1-206ENST00000483376 PRAG1Q86YV5 1406 aa23.73■■□□□ 1.39
COL2A1-206ENST00000483376 ALKQ9UM73 1620 aa23.73■■□□□ 1.39
COL2A1-206ENST00000483376 SETD1AO15047 1707 aaKnown RBP23.73■■□□□ 1.39
COL2A1-206ENST00000483376 NCOA3Q9Y6Q9 1424 aa23.72■■□□□ 1.39
COL2A1-206ENST00000483376 PTPRUQ92729 1446 aa23.71■■□□□ 1.39
COL2A1-206ENST00000483376 METP08581 1390 aa23.71■■□□□ 1.39
COL2A1-206ENST00000483376 XRN1Q8IZH2 1706 aaKnown RBP23.7■■□□□ 1.38
COL2A1-206ENST00000483376 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
COL2A1-206ENST00000483376 AMOTL2Q9Y2J4 779 aa23.67■■□□□ 1.38
COL2A1-206ENST00000483376 TMEM94Q12767 1356 aa23.66■■□□□ 1.38
COL2A1-206ENST00000483376 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
COL2A1-206ENST00000483376 LAMC1P11047 1609 aa23.65■■□□□ 1.38
COL2A1-206ENST00000483376 XIRP1Q702N8 1843 aaKnown RBP23.64■■□□□ 1.38
COL2A1-206ENST00000483376 PROSER2Q86WR7 435 aaPredicted RBP23.64■■□□□ 1.37
COL2A1-206ENST00000483376 C14orf93Q9H972 538 aaKnown RBP23.64■■□□□ 1.37
COL2A1-206ENST00000483376 PTCH1Q13635 1447 aa23.64■■□□□ 1.37
COL2A1-206ENST00000483376 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
COL2A1-206ENST00000483376 TECPR2O15040 1411 aa23.6■■□□□ 1.37
COL2A1-206ENST00000483376 TOM1O60784 492 aa23.6■■□□□ 1.37
COL2A1-206ENST00000483376 ASXL1Q8IXJ9 1541 aa23.59■■□□□ 1.37
COL2A1-206ENST00000483376 ILDR1Q86SU0 546 aaPredicted RBP23.59■■□□□ 1.37
COL2A1-206ENST00000483376 LRPPRCP42704 1394 aaKnown RBP23.58■■□□□ 1.37
COL2A1-206ENST00000483376 ABCC11Q96J66 1382 aa23.57■■□□□ 1.36
COL2A1-206ENST00000483376 UBAP1LF5GYI3 381 aa23.57■■□□□ 1.36
COL2A1-206ENST00000483376 SIN3AQ96ST3 1273 aa23.57■■□□□ 1.36
COL2A1-206ENST00000483376 CLSPNQ9HAW4 1339 aa23.56■■□□□ 1.36
COL2A1-206ENST00000483376 MSH6P52701 1360 aa23.55■■□□□ 1.36
COL2A1-206ENST00000483376 DCCP43146 1447 aa23.55■■□□□ 1.36
COL2A1-206ENST00000483376 KNDC1Q76NI1 1749 aa23.54■■□□□ 1.36
COL2A1-206ENST00000483376 ADGRB1O14514 1584 aa23.54■■□□□ 1.36
COL2A1-206ENST00000483376 CFAP70Q5T0N1 1121 aa23.54■■□□□ 1.36
COL2A1-206ENST00000483376 ROBO2Q9HCK4 1378 aa23.53■■□□□ 1.36
COL2A1-206ENST00000483376 YTHDC2Q9H6S0 1430 aaKnown RBP23.53■■□□□ 1.36
COL2A1-206ENST00000483376 SIRT1Q96EB6 747 aa23.53■■□□□ 1.36
COL2A1-206ENST00000483376 KDM2AQ9Y2K7 1162 aa23.53■■□□□ 1.36
COL2A1-206ENST00000483376 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
COL2A1-206ENST00000483376 C19orf44Q9H6X5 657 aa23.52■■□□□ 1.36
COL2A1-206ENST00000483376 KIAA1210Q9ULL0 1709 aa23.51■■□□□ 1.35
COL2A1-206ENST00000483376 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
COL2A1-206ENST00000483376 ADGRL3Q9HAR2 1447 aa23.5■■□□□ 1.35
COL2A1-206ENST00000483376 TMEM132EQ6IEE7 984 aa23.49■■□□□ 1.35
COL2A1-206ENST00000483376 RBM33Q96EV2 1170 aaKnown RBP23.49■■□□□ 1.35
COL2A1-206ENST00000483376 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
COL2A1-206ENST00000483376 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
COL2A1-206ENST00000483376 CADPS2Q86UW7 1296 aa23.47■■□□□ 1.35
COL2A1-206ENST00000483376 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.46■■□□□ 1.35
COL2A1-206ENST00000483376 C14orf37Q86TY3 774 aa23.44■■□□□ 1.34
COL2A1-206ENST00000483376 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
COL2A1-206ENST00000483376 TONSLQ96HA7 1378 aa23.42■■□□□ 1.34
COL2A1-206ENST00000483376 STK26Q9P289 416 aa23.42■■□□□ 1.34
COL2A1-206ENST00000483376 ATF3P18847 181 aa23.41■■□□□ 1.34
COL2A1-206ENST00000483376 SLAIN2Q9P270 581 aa23.4■■□□□ 1.34
COL2A1-206ENST00000483376 CDC42BPGQ6DT37 1551 aa23.4■■□□□ 1.34
COL2A1-206ENST00000483376 PIP4K2BP78356 416 aa23.39■■□□□ 1.33
COL2A1-206ENST00000483376 TIMELESSQ9UNS1 1208 aa23.39■■□□□ 1.33
COL2A1-206ENST00000483376 MST1RQ04912 1400 aa23.37■■□□□ 1.33
COL2A1-206ENST00000483376 PLEKHH1Q9ULM0 1364 aa23.37■■□□□ 1.33
COL2A1-206ENST00000483376 WAPLQ7Z5K2 1190 aa23.36■■□□□ 1.33
COL2A1-206ENST00000483376 TRPM1Q7Z4N2 1603 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms