RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 STRCQ7RTU9 1775 aa25.96■■□□□ 1.75
CPNE1-224ENST00000483359 ZFYVE9O95405 1425 aa25.95■■□□□ 1.74
CPNE1-224ENST00000483359 NEXMIFQ5QGS0 1516 aa25.94■■□□□ 1.74
CPNE1-224ENST00000483359 LTKP29376 864 aa25.94■■□□□ 1.74
CPNE1-224ENST00000483359 TXNDC2Q86VQ3 553 aa25.94■■□□□ 1.74
CPNE1-224ENST00000483359 ANKLE2Q86XL3 938 aa25.93■■□□□ 1.74
CPNE1-224ENST00000483359 SCAF11Q99590 1463 aaKnown RBP25.93■■□□□ 1.74
CPNE1-224ENST00000483359 EID1Q9Y6B2 187 aa25.93■■□□□ 1.74
CPNE1-224ENST00000483359 PPP1R15AO75807 674 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-224ENST00000483359 NEURL4Q96JN8 1562 aa25.92■■□□□ 1.74
CPNE1-224ENST00000483359 PPLO60437 1756 aa25.89■■□□□ 1.74
CPNE1-224ENST00000483359 IFT172Q9UG01 1749 aa25.88■■□□□ 1.73
CPNE1-224ENST00000483359 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.86■■□□□ 1.73
CPNE1-224ENST00000483359 HDGFP51858 240 aaKnown RBP25.85■■□□□ 1.73
CPNE1-224ENST00000483359 BCANQ96GW7 911 aa25.85■■□□□ 1.73
CPNE1-224ENST00000483359 IQGAP1P46940 1657 aa25.85■■□□□ 1.73
CPNE1-224ENST00000483359 NPHP4O75161 1426 aaPredicted RBP25.84■■□□□ 1.73
CPNE1-224ENST00000483359 RPGRIP1LQ68CZ1 1315 aa25.84■■□□□ 1.73
CPNE1-224ENST00000483359 DCAF11Q8TEB1 546 aa25.82■■□□□ 1.72
CPNE1-224ENST00000483359 MED14O60244 1454 aa25.82■■□□□ 1.72
CPNE1-224ENST00000483359 CLSPNQ9HAW4 1339 aa25.82■■□□□ 1.72
CPNE1-224ENST00000483359 KDM2AQ9Y2K7 1162 aa25.82■■□□□ 1.72
CPNE1-224ENST00000483359 PLEKHG1Q9ULL1 1385 aa25.8■■□□□ 1.72
CPNE1-224ENST00000483359 ADGRF5Q8IZF2 1346 aa25.79■■□□□ 1.72
CPNE1-224ENST00000483359 VGFO15240 615 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-224ENST00000483359 TONSLQ96HA7 1378 aa25.79■■□□□ 1.72
CPNE1-224ENST00000483359 L3MBTL2Q969R5 705 aa25.78■■□□□ 1.72
CPNE1-224ENST00000483359 SLC26A8Q96RN1 970 aa25.77■■□□□ 1.72
CPNE1-224ENST00000483359 MYOM2P54296 1465 aa25.76■■□□□ 1.72
CPNE1-224ENST00000483359 NRXN3Q9Y4C0 1643 aa25.76■■□□□ 1.71
CPNE1-224ENST00000483359 DMRT2Q9Y5R5 561 aa25.75■■□□□ 1.71
CPNE1-224ENST00000483359 SETBP1Q9Y6X0 1596 aa25.73■■□□□ 1.71
CPNE1-224ENST00000483359 PIK3C2GO75747 1445 aa25.72■■□□□ 1.71
CPNE1-224ENST00000483359 ADAMTS13Q76LX8 1427 aa25.72■■□□□ 1.71
CPNE1-224ENST00000483359 NRXN1Q9ULB1 1477 aa25.7■■□□□ 1.7
CPNE1-224ENST00000483359 ALKQ9UM73 1620 aa25.67■■□□□ 1.7
CPNE1-224ENST00000483359 DIP2AQ14689 1571 aa25.67■■□□□ 1.7
CPNE1-224ENST00000483359 SETD1AO15047 1707 aaKnown RBP25.65■■□□□ 1.7
CPNE1-224ENST00000483359 ZNF335Q9H4Z2 1342 aaPredicted RBP25.64■■□□□ 1.69
CPNE1-224ENST00000483359 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
CPNE1-224ENST00000483359 CFAP70Q5T0N1 1121 aa25.63■■□□□ 1.69
CPNE1-224ENST00000483359 STAC3Q96MF2 364 aa25.62■■□□□ 1.69
CPNE1-224ENST00000483359 TBX22Q9Y458 520 aa25.62■■□□□ 1.69
CPNE1-224ENST00000483359 METP08581 1390 aa25.62■■□□□ 1.69
CPNE1-224ENST00000483359 LAMC1P11047 1609 aa25.6■■□□□ 1.69
CPNE1-224ENST00000483359 ASXL1Q8IXJ9 1541 aa25.59■■□□□ 1.69
CPNE1-224ENST00000483359 STRCP1A6NGW2 1772 aa25.58■■□□□ 1.69
CPNE1-224ENST00000483359 TMEM132EQ6IEE7 984 aa25.58■■□□□ 1.69
CPNE1-224ENST00000483359 C14orf93Q9H972 538 aaKnown RBP25.58■■□□□ 1.69
CPNE1-224ENST00000483359 NBPF8Q3BBV2 869 aa25.56■■□□□ 1.68
CPNE1-224ENST00000483359 PTPRUQ92729 1446 aa25.56■■□□□ 1.68
CPNE1-224ENST00000483359 CHD2O14647 1828 aaKnown RBP25.55■■□□□ 1.68
CPNE1-224ENST00000483359 TIMELESSQ9UNS1 1208 aa25.55■■□□□ 1.68
CPNE1-224ENST00000483359 TRPM1Q7Z4N2 1603 aa25.53■■□□□ 1.68
CPNE1-224ENST00000483359 NWD1Q149M9 1564 aa25.53■■□□□ 1.68
CPNE1-224ENST00000483359 PIK3R4Q99570 1358 aa25.53■■□□□ 1.68
CPNE1-224ENST00000483359 KIAA1210Q9ULL0 1709 aa25.51■■□□□ 1.67
CPNE1-224ENST00000483359 ADGRB1O14514 1584 aa25.51■■□□□ 1.67
CPNE1-224ENST00000483359 KCNA6P17658 529 aa25.51■■□□□ 1.67
CPNE1-224ENST00000483359 STK26Q9P289 416 aa25.51■■□□□ 1.67
CPNE1-224ENST00000483359 AMOTL2Q9Y2J4 779 aa25.51■■□□□ 1.67
CPNE1-224ENST00000483359 NBPF1Q3BBV0 1214 aa25.51■■□□□ 1.67
CPNE1-224ENST00000483359 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
CPNE1-224ENST00000483359 LTBP4Q8N2S1 1624 aa25.5■■□□□ 1.67
CPNE1-224ENST00000483359 YTHDC2Q9H6S0 1430 aaKnown RBP25.48■■□□□ 1.67
CPNE1-224ENST00000483359 RBM33Q96EV2 1170 aaKnown RBP25.47■■□□□ 1.67
CPNE1-224ENST00000483359 ROCK2O75116 1388 aaKnown RBP25.47■■□□□ 1.67
CPNE1-224ENST00000483359 NKTRP30414 1462 aaKnown RBP25.46■■□□□ 1.67
CPNE1-224ENST00000483359 CPS1P31327 1500 aa25.45■■□□□ 1.67
CPNE1-224ENST00000483359 LRPPRCP42704 1394 aaKnown RBP25.45■■□□□ 1.66
CPNE1-224ENST00000483359 RALGAPBQ86X10 1494 aa25.44■■□□□ 1.66
CPNE1-224ENST00000483359 TRAK1Q9UPV9 953 aa25.43■■□□□ 1.66
CPNE1-224ENST00000483359 ROBO2Q9HCK4 1378 aa25.42■■□□□ 1.66
CPNE1-224ENST00000483359 KNDC1Q76NI1 1749 aa25.42■■□□□ 1.66
CPNE1-224ENST00000483359 LRRC7Q96NW7 1537 aa25.42■■□□□ 1.66
CPNE1-224ENST00000483359 PROSER2Q86WR7 435 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-224ENST00000483359 PTCH1Q13635 1447 aa25.4■■□□□ 1.66
CPNE1-224ENST00000483359 TECPR2O15040 1411 aa25.39■■□□□ 1.66
CPNE1-224ENST00000483359 TMEM94Q12767 1356 aa25.39■■□□□ 1.65
CPNE1-224ENST00000483359 ABCC11Q96J66 1382 aa25.39■■□□□ 1.65
CPNE1-224ENST00000483359 XIRP1Q702N8 1843 aaKnown RBP25.37■■□□□ 1.65
CPNE1-224ENST00000483359 CARD11Q9BXL7 1154 aa25.37■■□□□ 1.65
CPNE1-224ENST00000483359 ARHGEF28Q8N1W1 1705 aaKnown RBP25.37■■□□□ 1.65
CPNE1-224ENST00000483359 WAPLQ7Z5K2 1190 aa25.36■■□□□ 1.65
CPNE1-224ENST00000483359 PLEKHH1Q9ULM0 1364 aa25.36■■□□□ 1.65
CPNE1-224ENST00000483359 SAFB2Q14151 953 aaKnown RBP eCLIP25.35■■□□□ 1.653e-13■□□□□ 9.1
CPNE1-224ENST00000483359 GPRASP1Q5JY77 1395 aa25.35■■□□□ 1.65
CPNE1-224ENST00000483359 C14orf37Q86TY3 774 aa25.35■■□□□ 1.65
CPNE1-224ENST00000483359 PRAM1Q96QH2 718 aa25.34■■□□□ 1.65
CPNE1-224ENST00000483359 DLC1Q96QB1 1528 aa25.34■■□□□ 1.65
CPNE1-224ENST00000483359 CERKQ8TCT0 537 aa25.31■■□□□ 1.64
CPNE1-224ENST00000483359 POGKQ9P215 609 aa25.31■■□□□ 1.64
CPNE1-224ENST00000483359 NALCNQ8IZF0 1738 aa25.31■■□□□ 1.64
CPNE1-224ENST00000483359 FAM135BQ49AJ0 1406 aa25.3■■□□□ 1.64
CPNE1-224ENST00000483359 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-224ENST00000483359 ADGRL3Q9HAR2 1447 aa25.26■■□□□ 1.63
CPNE1-224ENST00000483359 MSH6P52701 1360 aa25.25■■□□□ 1.63
CPNE1-224ENST00000483359 EIF3AQ14152 1382 aaKnown RBP25.25■■□□□ 1.63
CPNE1-224ENST00000483359 SIRT1Q96EB6 747 aa25.25■■□□□ 1.63
CPNE1-224ENST00000483359 HIRIP3Q9BW71 556 aaPredicted RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms