RNA–Protein interactions for RNA: ENST00000483342.5

SNHG11-215, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 1 (best)

Gene SNHG11, Length 1,509 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-215ENST00000483342 VGFO15240 615 aaPredicted RBP24.36■■□□□ 1.49
SNHG11-215ENST00000483342 STAC3Q96MF2 364 aa24.36■■□□□ 1.49
SNHG11-215ENST00000483342 TMEM2Q9UHN6 1383 aa24.36■■□□□ 1.49
SNHG11-215ENST00000483342 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
SNHG11-215ENST00000483342 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
SNHG11-215ENST00000483342 TXNDC2Q86VQ3 553 aa24.35■■□□□ 1.49
SNHG11-215ENST00000483342 RIMS2Q9UQ26 1411 aa24.34■■□□□ 1.49
SNHG11-215ENST00000483342 UBR1Q8IWV7 1749 aa24.34■■□□□ 1.49
SNHG11-215ENST00000483342 KDM5AP29375 1690 aaKnown RBP24.33■■□□□ 1.49
SNHG11-215ENST00000483342 ANKLE2Q86XL3 938 aa24.33■■□□□ 1.49
SNHG11-215ENST00000483342 ZNF142P52746 1687 aaPredicted RBP24.31■■□□□ 1.48
SNHG11-215ENST00000483342 MYO5BQ9ULV0 1848 aa24.3■■□□□ 1.48
SNHG11-215ENST00000483342 LTKP29376 864 aa24.3■■□□□ 1.48
SNHG11-215ENST00000483342 BCANQ96GW7 911 aa24.29■■□□□ 1.48
SNHG11-215ENST00000483342 ADGRF5Q8IZF2 1346 aa24.28■■□□□ 1.48
SNHG11-215ENST00000483342 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
SNHG11-215ENST00000483342 ZFYVE9O95405 1425 aa24.27■■□□□ 1.48
SNHG11-215ENST00000483342 SLIT1O75093 1534 aa24.27■■□□□ 1.48
SNHG11-215ENST00000483342 NEXMIFQ5QGS0 1516 aa24.26■■□□□ 1.47
SNHG11-215ENST00000483342 ARHGAP23Q9P227 1491 aa24.26■■□□□ 1.47
SNHG11-215ENST00000483342 NCKAP5LQ9HCH0 1330 aa24.23■■□□□ 1.47
SNHG11-215ENST00000483342 MYOM2P54296 1465 aa24.22■■□□□ 1.47
SNHG11-215ENST00000483342 SCAF11Q99590 1463 aaKnown RBP24.22■■□□□ 1.47
SNHG11-215ENST00000483342 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
SNHG11-215ENST00000483342 PPLO60437 1756 aa24.2■■□□□ 1.46
SNHG11-215ENST00000483342 PRAG1Q86YV5 1406 aa24.18■■□□□ 1.46
SNHG11-215ENST00000483342 PLEKHG1Q9ULL1 1385 aa24.18■■□□□ 1.46
SNHG11-215ENST00000483342 IFT172Q9UG01 1749 aa24.17■■□□□ 1.46
SNHG11-215ENST00000483342 CFAP70Q5T0N1 1121 aa24.16■■□□□ 1.46
SNHG11-215ENST00000483342 C14orf93Q9H972 538 aaKnown RBP24.16■■□□□ 1.46
SNHG11-215ENST00000483342 NRXN1Q9ULB1 1477 aa24.15■■□□□ 1.46
SNHG11-215ENST00000483342 PIK3C2GO75747 1445 aa24.15■■□□□ 1.46
SNHG11-215ENST00000483342 SLC26A8Q96RN1 970 aa24.14■■□□□ 1.45
SNHG11-215ENST00000483342 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
SNHG11-215ENST00000483342 STRCQ7RTU9 1775 aa24.11■■□□□ 1.45
SNHG11-215ENST00000483342 NBPF1Q3BBV0 1214 aa24.1■■□□□ 1.45
SNHG11-215ENST00000483342 TBX22Q9Y458 520 aa24.1■■□□□ 1.45
SNHG11-215ENST00000483342 MED14O60244 1454 aa24.09■■□□□ 1.45
SNHG11-215ENST00000483342 ROCK2O75116 1388 aaKnown RBP24.08■■□□□ 1.45
SNHG11-215ENST00000483342 TMEM132EQ6IEE7 984 aa24.08■■□□□ 1.45
SNHG11-215ENST00000483342 DMRT2Q9Y5R5 561 aa24.08■■□□□ 1.45
SNHG11-215ENST00000483342 SETBP1Q9Y6X0 1596 aa24.06■■□□□ 1.44
SNHG11-215ENST00000483342 ADAMTS13Q76LX8 1427 aa24.06■■□□□ 1.44
SNHG11-215ENST00000483342 CARD11Q9BXL7 1154 aa24.05■■□□□ 1.44
SNHG11-215ENST00000483342 ALKQ9UM73 1620 aa24.05■■□□□ 1.44
SNHG11-215ENST00000483342 POLR1AO95602 1720 aaPredicted RBP24.04■■□□□ 1.44
SNHG11-215ENST00000483342 RALGAPBQ86X10 1494 aa24.02■■□□□ 1.44
SNHG11-215ENST00000483342 METP08581 1390 aa24.02■■□□□ 1.44
SNHG11-215ENST00000483342 STK26Q9P289 416 aa24.01■■□□□ 1.43
SNHG11-215ENST00000483342 IQGAP1P46940 1657 aa24.01■■□□□ 1.43
SNHG11-215ENST00000483342 NRXN3Q9Y4C0 1643 aa24■■□□□ 1.43
SNHG11-215ENST00000483342 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
SNHG11-215ENST00000483342 TRAK1Q9UPV9 953 aa23.98■■□□□ 1.43
SNHG11-215ENST00000483342 KIAA1210Q9ULL0 1709 aa23.98■■□□□ 1.43
SNHG11-215ENST00000483342 LAMC1P11047 1609 aa23.98■■□□□ 1.43
SNHG11-215ENST00000483342 GPRASP1Q5JY77 1395 aa23.97■■□□□ 1.43
SNHG11-215ENST00000483342 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
SNHG11-215ENST00000483342 DIP2AQ14689 1571 aa23.97■■□□□ 1.43
SNHG11-215ENST00000483342 PIK3R4Q99570 1358 aa23.96■■□□□ 1.43
SNHG11-215ENST00000483342 YTHDC2Q9H6S0 1430 aaKnown RBP23.95■■□□□ 1.42
SNHG11-215ENST00000483342 LRPPRCP42704 1394 aaKnown RBP23.94■■□□□ 1.42
SNHG11-215ENST00000483342 ADGRB1O14514 1584 aa23.93■■□□□ 1.42
SNHG11-215ENST00000483342 KCNA6P17658 529 aa23.93■■□□□ 1.42
SNHG11-215ENST00000483342 EIF4G2P78344 907 aaKnown RBP eCLIP23.92■■□□□ 1.42
SNHG11-215ENST00000483342 ABCC11Q96J66 1382 aa23.92■■□□□ 1.42
SNHG11-215ENST00000483342 PTPRUQ92729 1446 aa23.91■■□□□ 1.42
SNHG11-215ENST00000483342 ASXL1Q8IXJ9 1541 aa23.91■■□□□ 1.42
SNHG11-215ENST00000483342 SETD1AO15047 1707 aaKnown RBP23.89■■□□□ 1.42
SNHG11-215ENST00000483342 POGKQ9P215 609 aa23.89■■□□□ 1.41
SNHG11-215ENST00000483342 USP47Q96K76 1375 aa23.88■■□□□ 1.41
SNHG11-215ENST00000483342 EIF3AQ14152 1382 aaKnown RBP23.87■■□□□ 1.41
SNHG11-215ENST00000483342 SIRT1Q96EB6 747 aa23.87■■□□□ 1.41
SNHG11-215ENST00000483342 HSPA5P11021 654 aaKnown RBP23.86■■□□□ 1.41
SNHG11-215ENST00000483342 PRAM1Q96QH2 718 aa23.86■■□□□ 1.41
SNHG11-215ENST00000483342 ST20-MTHFSA0A0A6YYL1 179 aa23.85■■□□□ 1.41
SNHG11-215ENST00000483342 WAPLQ7Z5K2 1190 aa23.85■■□□□ 1.41
SNHG11-215ENST00000483342 ZNF335Q9H4Z2 1342 aaPredicted RBP23.85■■□□□ 1.41
SNHG11-215ENST00000483342 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
SNHG11-215ENST00000483342 PROSER2Q86WR7 435 aaPredicted RBP23.84■■□□□ 1.41
SNHG11-215ENST00000483342 CENPJQ9HC77 1338 aaPredicted RBP23.83■■□□□ 1.41
SNHG11-215ENST00000483342 HIRIP3Q9BW71 556 aaPredicted RBP23.83■■□□□ 1.41
SNHG11-215ENST00000483342 ROBO2Q9HCK4 1378 aa23.82■■□□□ 1.4
SNHG11-215ENST00000483342 TECPR2O15040 1411 aa23.82■■□□□ 1.4
SNHG11-215ENST00000483342 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
SNHG11-215ENST00000483342 FAM135BQ49AJ0 1406 aa23.8■■□□□ 1.4
SNHG11-215ENST00000483342 DLC1Q96QB1 1528 aa23.79■■□□□ 1.4
SNHG11-215ENST00000483342 RBM33Q96EV2 1170 aaKnown RBP23.78■■□□□ 1.4
SNHG11-215ENST00000483342 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
SNHG11-215ENST00000483342 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
SNHG11-215ENST00000483342 SLC24A1O60721 1099 aa23.76■■□□□ 1.39
SNHG11-215ENST00000483342 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
SNHG11-215ENST00000483342 CERKQ8TCT0 537 aa23.76■■□□□ 1.39
SNHG11-215ENST00000483342 LTBP4Q8N2S1 1624 aa23.76■■□□□ 1.39
SNHG11-215ENST00000483342 XRN1Q8IZH2 1706 aaKnown RBP23.75■■□□□ 1.39
SNHG11-215ENST00000483342 MINK1Q8N4C8 1332 aaPredicted RBP23.75■■□□□ 1.39
SNHG11-215ENST00000483342 CPS1P31327 1500 aa23.75■■□□□ 1.39
SNHG11-215ENST00000483342 NWD1Q149M9 1564 aa23.74■■□□□ 1.39
SNHG11-215ENST00000483342 NKTRP30414 1462 aaKnown RBP23.74■■□□□ 1.39
SNHG11-215ENST00000483342 KNDC1Q76NI1 1749 aa23.73■■□□□ 1.39
SNHG11-215ENST00000483342 TESK2Q96S53 571 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms