RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 EYA1Q99502 592 aa12.33□□□□□ -0.44
PMS1-219ENST00000483293 SEPT9Q9UHD8 586 aaPredicted RBP12.33□□□□□ -0.44
PMS1-219ENST00000483293 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
PMS1-219ENST00000483293 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
PMS1-219ENST00000483293 GIGYF2Q6Y7W6 1299 aaKnown RBP12.3□□□□□ -0.44
PMS1-219ENST00000483293 ONECUT3O60422 494 aaPredicted RBP12.28□□□□□ -0.44
PMS1-219ENST00000483293 CLCN1P35523 988 aa12.28□□□□□ -0.44
PMS1-219ENST00000483293 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
PMS1-219ENST00000483293 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
PMS1-219ENST00000483293 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
PMS1-219ENST00000483293 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
PMS1-219ENST00000483293 MS4A1P11836 297 aa12.26□□□□□ -0.45
PMS1-219ENST00000483293 WNT2BQ93097 391 aa12.26□□□□□ -0.45
PMS1-219ENST00000483293 SSTR3P32745 418 aaPredicted RBP12.25□□□□□ -0.45
PMS1-219ENST00000483293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
PMS1-219ENST00000483293 DNAJB2P25686 324 aa12.24□□□□□ -0.45
PMS1-219ENST00000483293 TMUB1Q9BVT8 246 aa12.24□□□□□ -0.45
PMS1-219ENST00000483293 ITGBL1O95965 494 aaPredicted RBP12.22□□□□□ -0.45
PMS1-219ENST00000483293 TMEM132AQ24JP5 1023 aa12.22□□□□□ -0.45
PMS1-219ENST00000483293 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
PMS1-219ENST00000483293 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
PMS1-219ENST00000483293 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
PMS1-219ENST00000483293 SWT1Q5T5J6 900 aaKnown RBP12.2□□□□□ -0.46
PMS1-219ENST00000483293 FAM217BQ9NTX9 383 aaPredicted RBP12.2□□□□□ -0.46
PMS1-219ENST00000483293 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
PMS1-219ENST00000483293 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
PMS1-219ENST00000483293 BEGAINQ9BUH8 593 aa12.18□□□□□ -0.46
PMS1-219ENST00000483293 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
PMS1-219ENST00000483293 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
PMS1-219ENST00000483293 HDGFP51858 240 aaKnown RBP12.17□□□□□ -0.46
PMS1-219ENST00000483293 FAM98CQ17RN3 349 aaKnown RBP12.17□□□□□ -0.46
PMS1-219ENST00000483293 RNF40O75150 1001 aa12.16□□□□□ -0.46
PMS1-219ENST00000483293 TRAF7Q6Q0C0 670 aa12.16□□□□□ -0.46
PMS1-219ENST00000483293 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
PMS1-219ENST00000483293 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
PMS1-219ENST00000483293 DDRGK1Q96HY6 314 aa12.15□□□□□ -0.46
PMS1-219ENST00000483293 ZFRQ96KR1 1074 aaKnown RBP12.14□□□□□ -0.47
PMS1-219ENST00000483293 LAPTM4AQ15012 233 aa12.13□□□□□ -0.47
PMS1-219ENST00000483293 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
PMS1-219ENST00000483293 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
PMS1-219ENST00000483293 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
PMS1-219ENST00000483293 SLC10A3P09131 477 aa12.09□□□□□ -0.47
PMS1-219ENST00000483293 CD46P15529 392 aa12.09□□□□□ -0.47
PMS1-219ENST00000483293 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
PMS1-219ENST00000483293 GFRA3O60609 400 aa12.06□□□□□ -0.48
PMS1-219ENST00000483293 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
PMS1-219ENST00000483293 LRCH3Q96II8 777 aa12.06□□□□□ -0.48
PMS1-219ENST00000483293 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
PMS1-219ENST00000483293 SLC4A3P48751 1232 aa12.05□□□□□ -0.48
PMS1-219ENST00000483293 BCAMP50895 628 aa12.05□□□□□ -0.48
PMS1-219ENST00000483293 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
PMS1-219ENST00000483293 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
PMS1-219ENST00000483293 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
PMS1-219ENST00000483293 ANKK1Q8NFD2 765 aa12.04□□□□□ -0.48
PMS1-219ENST00000483293 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
PMS1-219ENST00000483293 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
PMS1-219ENST00000483293 GCGRP47871 477 aa12.01□□□□□ -0.49
PMS1-219ENST00000483293 PROCA1Q8NCQ7 364 aaPredicted RBP12.01□□□□□ -0.49
PMS1-219ENST00000483293 CFHP08603 1231 aa12□□□□□ -0.49
PMS1-219ENST00000483293 NDUFV2P19404 249 aa12□□□□□ -0.49
PMS1-219ENST00000483293 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
PMS1-219ENST00000483293 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
PMS1-219ENST00000483293 KDM4AO75164 1064 aa11.99□□□□□ -0.49
PMS1-219ENST00000483293 PPP4CP60510 307 aa11.99□□□□□ -0.49
PMS1-219ENST00000483293 KCNC4Q03721 635 aa11.99□□□□□ -0.49
PMS1-219ENST00000483293 MYSM1Q5VVJ2 828 aa11.99□□□□□ -0.49
PMS1-219ENST00000483293 SOWAHBA6NEL2 793 aa11.98□□□□□ -0.49
PMS1-219ENST00000483293 CSPP1Q1MSJ5 1256 aa11.98□□□□□ -0.49
PMS1-219ENST00000483293 SH3D19Q5HYK7 790 aa11.98□□□□□ -0.49
PMS1-219ENST00000483293 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
PMS1-219ENST00000483293 MOXD2PA6NHM9 499 aa11.97□□□□□ -0.49
PMS1-219ENST00000483293 SKIV2LQ15477 1246 aaKnown RBP11.97□□□□□ -0.49
PMS1-219ENST00000483293 HLA-CQ95604 372 aa11.96□□□□□ -0.49
PMS1-219ENST00000483293 GUCA2AQ02747 115 aa11.95□□□□□ -0.5
PMS1-219ENST00000483293 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
PMS1-219ENST00000483293 LIMD1Q9UGP4 676 aa11.95□□□□□ -0.5
PMS1-219ENST00000483293 CLK2P49760 499 aaKnown RBP11.94□□□□□ -0.5
PMS1-219ENST00000483293 FUT2Q10981 343 aa11.94□□□□□ -0.5
PMS1-219ENST00000483293 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
PMS1-219ENST00000483293 ZNF775Q96BV0 537 aaPredicted RBP11.94□□□□□ -0.5
PMS1-219ENST00000483293 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
PMS1-219ENST00000483293 NRG2O14511 850 aaPredicted RBP11.93□□□□□ -0.5
PMS1-219ENST00000483293 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
PMS1-219ENST00000483293 PUS10Q3MIT2 529 aaKnown RBP11.93□□□□□ -0.5
PMS1-219ENST00000483293 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
PMS1-219ENST00000483293 KMT5BQ4FZB7 885 aa11.92□□□□□ -0.5
PMS1-219ENST00000483293 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
PMS1-219ENST00000483293 GOPCQ9HD26 462 aa11.91□□□□□ -0.5
PMS1-219ENST00000483293 PCDHB15Q9Y5E8 787 aa11.91□□□□□ -0.5
PMS1-219ENST00000483293 HOXA2O43364 376 aa11.9□□□□□ -0.5
PMS1-219ENST00000483293 APLP1P51693 650 aa11.9□□□□□ -0.5
PMS1-219ENST00000483293 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
PMS1-219ENST00000483293 SPTLC1O15269 473 aa11.88□□□□□ -0.51
PMS1-219ENST00000483293 FDX1P10109 184 aa11.88□□□□□ -0.51
PMS1-219ENST00000483293 USP46P62068 366 aa11.88□□□□□ -0.51
PMS1-219ENST00000483293 ATP6V1AP38606 617 aa11.87□□□□□ -0.51
PMS1-219ENST00000483293 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
PMS1-219ENST00000483293 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
PMS1-219ENST00000483293 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
PMS1-219ENST00000483293 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms