RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 PPP1R15AO75807 674 aaPredicted RBP29.8■■■□□ 2.36
RXRB-204ENST00000483281 HDGFP51858 240 aaKnown RBP29.79■■■□□ 2.36
RXRB-204ENST00000483281 NEXMIFQ5QGS0 1516 aa29.79■■■□□ 2.36
RXRB-204ENST00000483281 TMEM2Q9UHN6 1383 aa29.78■■■□□ 2.36
RXRB-204ENST00000483281 SLIT1O75093 1534 aa29.78■■■□□ 2.36
RXRB-204ENST00000483281 ZFYVE9O95405 1425 aa29.78■■■□□ 2.36
RXRB-204ENST00000483281 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.77■■■□□ 2.36
RXRB-204ENST00000483281 ARHGAP23Q9P227 1491 aa29.77■■■□□ 2.36
RXRB-204ENST00000483281 VGFO15240 615 aaPredicted RBP29.76■■■□□ 2.35
RXRB-204ENST00000483281 MYOM2P54296 1465 aa29.75■■■□□ 2.35
RXRB-204ENST00000483281 RIMS2Q9UQ26 1411 aa29.75■■■□□ 2.35
RXRB-204ENST00000483281 KDM2AQ9Y2K7 1162 aa29.73■■■□□ 2.35
RXRB-204ENST00000483281 NRXN1Q9ULB1 1477 aa29.7■■■□□ 2.34
RXRB-204ENST00000483281 EID1Q9Y6B2 187 aa29.68■■■□□ 2.34
RXRB-204ENST00000483281 LMTK3Q96Q04 1460 aa29.68■■■□□ 2.34
RXRB-204ENST00000483281 ADGRF5Q8IZF2 1346 aa29.66■■■□□ 2.34
RXRB-204ENST00000483281 TXNDC2Q86VQ3 553 aa29.66■■■□□ 2.34
RXRB-204ENST00000483281 PRAG1Q86YV5 1406 aa29.65■■■□□ 2.34
RXRB-204ENST00000483281 LTKP29376 864 aa29.65■■■□□ 2.34
RXRB-204ENST00000483281 ANKLE2Q86XL3 938 aa29.64■■■□□ 2.34
RXRB-204ENST00000483281 NBPF8Q3BBV2 869 aa29.63■■■□□ 2.33
RXRB-204ENST00000483281 NUTM2DQ5VT03 806 aaPredicted RBP29.62■■■□□ 2.33
RXRB-204ENST00000483281 SCAF11Q99590 1463 aaKnown RBP29.61■■■□□ 2.33
RXRB-204ENST00000483281 PIK3C2GO75747 1445 aa29.61■■■□□ 2.33
RXRB-204ENST00000483281 PLEKHG1Q9ULL1 1385 aa29.59■■■□□ 2.33
RXRB-204ENST00000483281 KIAA1210Q9ULL0 1709 aa29.58■■■□□ 2.33
RXRB-204ENST00000483281 C14orf93Q9H972 538 aaKnown RBP29.57■■■□□ 2.32
RXRB-204ENST00000483281 POLR1AO95602 1720 aaPredicted RBP29.55■■■□□ 2.32
RXRB-204ENST00000483281 SETBP1Q9Y6X0 1596 aa29.55■■■□□ 2.32
RXRB-204ENST00000483281 MED14O60244 1454 aa29.55■■■□□ 2.32
RXRB-204ENST00000483281 TRPM1Q7Z4N2 1603 aa29.55■■■□□ 2.32
RXRB-204ENST00000483281 HSPA2P54652 639 aa29.53■■■□□ 2.32
RXRB-204ENST00000483281 LAMC1P11047 1609 aa29.52■■■□□ 2.32
RXRB-204ENST00000483281 PELP1Q8IZL8 1130 aaKnown RBP29.52■■■□□ 2.32
RXRB-204ENST00000483281 RALGAPBQ86X10 1494 aa29.51■■■□□ 2.31
RXRB-204ENST00000483281 NRXN3Q9Y4C0 1643 aa29.51■■■□□ 2.31
RXRB-204ENST00000483281 CFAP70Q5T0N1 1121 aa29.5■■■□□ 2.31
RXRB-204ENST00000483281 ALKQ9UM73 1620 aa29.49■■■□□ 2.31
RXRB-204ENST00000483281 NCKAP5LQ9HCH0 1330 aa29.48■■■□□ 2.31
RXRB-204ENST00000483281 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
RXRB-204ENST00000483281 IQGAP1P46940 1657 aa29.47■■■□□ 2.31
RXRB-204ENST00000483281 ADAMTS13Q76LX8 1427 aa29.46■■■□□ 2.31
RXRB-204ENST00000483281 TBX22Q9Y458 520 aa29.46■■■□□ 2.31
RXRB-204ENST00000483281 GPRASP1Q5JY77 1395 aa29.46■■■□□ 2.31
RXRB-204ENST00000483281 STRCQ7RTU9 1775 aa29.46■■■□□ 2.31
RXRB-204ENST00000483281 NPHP4O75161 1426 aaPredicted RBP29.45■■■□□ 2.31
RXRB-204ENST00000483281 SETD1AO15047 1707 aaKnown RBP29.45■■■□□ 2.31
RXRB-204ENST00000483281 NBPF1Q3BBV0 1214 aa29.44■■■□□ 2.3
RXRB-204ENST00000483281 BCANQ96GW7 911 aa29.44■■■□□ 2.3
RXRB-204ENST00000483281 DIP2AQ14689 1571 aa29.44■■■□□ 2.3
RXRB-204ENST00000483281 ROCK2O75116 1388 aaKnown RBP29.42■■■□□ 2.3
RXRB-204ENST00000483281 ADGRB1O14514 1584 aa29.4■■■□□ 2.3
RXRB-204ENST00000483281 SLC26A8Q96RN1 970 aa29.38■■■□□ 2.29
RXRB-204ENST00000483281 CARD11Q9BXL7 1154 aa29.37■■■□□ 2.29
RXRB-204ENST00000483281 SENP3Q9H4L4 574 aaPredicted RBP29.37■■■□□ 2.29
RXRB-204ENST00000483281 PIK3R4Q99570 1358 aa29.36■■■□□ 2.29
RXRB-204ENST00000483281 TMEM132EQ6IEE7 984 aa29.35■■■□□ 2.29
RXRB-204ENST00000483281 ASXL1Q8IXJ9 1541 aa29.35■■■□□ 2.29
RXRB-204ENST00000483281 METP08581 1390 aa29.34■■■□□ 2.29
RXRB-204ENST00000483281 DMRT2Q9Y5R5 561 aa29.34■■■□□ 2.29
RXRB-204ENST00000483281 YTHDC2Q9H6S0 1430 aaKnown RBP29.3■■■□□ 2.28
RXRB-204ENST00000483281 LRPPRCP42704 1394 aaKnown RBP29.3■■■□□ 2.28
RXRB-204ENST00000483281 ABCC11Q96J66 1382 aa29.29■■■□□ 2.28
RXRB-204ENST00000483281 CHD2O14647 1828 aaKnown RBP29.28■■■□□ 2.28
RXRB-204ENST00000483281 SIRT1Q96EB6 747 aa29.26■■■□□ 2.28
RXRB-204ENST00000483281 EIF4G2P78344 907 aaKnown RBP eCLIP29.26■■■□□ 2.27
RXRB-204ENST00000483281 TECPR2O15040 1411 aa29.24■■■□□ 2.27
RXRB-204ENST00000483281 PTPRUQ92729 1446 aa29.24■■■□□ 2.27
RXRB-204ENST00000483281 KNDC1Q76NI1 1749 aa29.24■■■□□ 2.27
RXRB-204ENST00000483281 DLC1Q96QB1 1528 aa29.23■■■□□ 2.27
RXRB-204ENST00000483281 USP47Q96K76 1375 aa29.23■■■□□ 2.27
RXRB-204ENST00000483281 AMOTL2Q9Y2J4 779 aa29.22■■■□□ 2.27
RXRB-204ENST00000483281 TRAK1Q9UPV9 953 aa29.22■■■□□ 2.27
RXRB-204ENST00000483281 KCNA6P17658 529 aa29.21■■■□□ 2.27
RXRB-204ENST00000483281 EIF3AQ14152 1382 aaKnown RBP29.21■■■□□ 2.27
RXRB-204ENST00000483281 STK26Q9P289 416 aa29.21■■■□□ 2.27
RXRB-204ENST00000483281 XRN1Q8IZH2 1706 aaKnown RBP29.2■■■□□ 2.26
RXRB-204ENST00000483281 ARHGEF28Q8N1W1 1705 aaKnown RBP29.19■■■□□ 2.26
RXRB-204ENST00000483281 HSPA5P11021 654 aaKnown RBP29.18■■■□□ 2.26
RXRB-204ENST00000483281 FAM135BQ49AJ0 1406 aa29.18■■■□□ 2.26
RXRB-204ENST00000483281 CPS1P31327 1500 aa29.17■■■□□ 2.26
RXRB-204ENST00000483281 NWD1Q149M9 1564 aa29.17■■■□□ 2.26
RXRB-204ENST00000483281 ST20-MTHFSA0A0A6YYL1 179 aa29.15■■■□□ 2.26
RXRB-204ENST00000483281 PTCH1Q13635 1447 aa29.15■■■□□ 2.26
RXRB-204ENST00000483281 SLC24A1O60721 1099 aa29.13■■■□□ 2.25
RXRB-204ENST00000483281 CENPJQ9HC77 1338 aaPredicted RBP29.12■■■□□ 2.25
RXRB-204ENST00000483281 ROBO2Q9HCK4 1378 aa29.11■■■□□ 2.25
RXRB-204ENST00000483281 PRAM1Q96QH2 718 aa29.1■■■□□ 2.25
RXRB-204ENST00000483281 POGKQ9P215 609 aa29.1■■■□□ 2.25
RXRB-204ENST00000483281 SBNO2Q9Y2G9 1366 aa29.09■■■□□ 2.25
RXRB-204ENST00000483281 NKTRP30414 1462 aaKnown RBP29.08■■■□□ 2.25
RXRB-204ENST00000483281 STRCP1A6NGW2 1772 aa29.08■■■□□ 2.25
RXRB-204ENST00000483281 TESK2Q96S53 571 aa29.08■■■□□ 2.25
RXRB-204ENST00000483281 WAPLQ7Z5K2 1190 aa29.07■■■□□ 2.24
RXRB-204ENST00000483281 QRICH2Q9H0J4 1663 aa29.05■■■□□ 2.24
RXRB-204ENST00000483281 HIRIP3Q9BW71 556 aaPredicted RBP29.04■■■□□ 2.24
RXRB-204ENST00000483281 PLEKHH1Q9ULM0 1364 aa29.03■■■□□ 2.24
RXRB-204ENST00000483281 ZNF335Q9H4Z2 1342 aaPredicted RBP29.02■■■□□ 2.24
RXRB-204ENST00000483281 NCOA3Q9Y6Q9 1424 aa29.01■■■□□ 2.23
RXRB-204ENST00000483281 PROSER2Q86WR7 435 aaPredicted RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms