RNA–Protein interactions for RNA: ENST00000483020.5

TSC2-213, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-213ENST00000483020 MSH6P52701 1360 aa20.46■□□□□ 0.87
TSC2-213ENST00000483020 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.87
TSC2-213ENST00000483020 GCC2Q8IWJ2 1684 aa20.45■□□□□ 0.86
TSC2-213ENST00000483020 JCADQ9P266 1359 aa20.44■□□□□ 0.86
TSC2-213ENST00000483020 ANKRD30AQ9BXX3 1397 aa20.43■□□□□ 0.86
TSC2-213ENST00000483020 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
TSC2-213ENST00000483020 ZFYVE9O95405 1425 aa20.42■□□□□ 0.86
TSC2-213ENST00000483020 SLAIN2Q9P270 581 aa20.41■□□□□ 0.86
TSC2-213ENST00000483020 CHIC2Q9UKJ5 165 aa20.41■□□□□ 0.86
TSC2-213ENST00000483020 LRP6O75581 1613 aa20.4■□□□□ 0.86
TSC2-213ENST00000483020 BCANQ96GW7 911 aa20.4■□□□□ 0.86
TSC2-213ENST00000483020 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.85
TSC2-213ENST00000483020 SLC52A1Q9NWF4 448 aa20.38■□□□□ 0.85
TSC2-213ENST00000483020 TMEM131LA2VDJ0 1609 aa20.38■□□□□ 0.85
TSC2-213ENST00000483020 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
TSC2-213ENST00000483020 ADGRL2O95490 1459 aa20.36■□□□□ 0.85
TSC2-213ENST00000483020 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
TSC2-213ENST00000483020 SHPRHQ149N8 1683 aa20.35■□□□□ 0.85
TSC2-213ENST00000483020 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.35■□□□□ 0.85
TSC2-213ENST00000483020 AHDC1Q5TGY3 1603 aaPredicted RBP20.35■□□□□ 0.85
TSC2-213ENST00000483020 PPARGC1BQ86YN6 1023 aaKnown RBP20.34■□□□□ 0.85
TSC2-213ENST00000483020 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
TSC2-213ENST00000483020 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
TSC2-213ENST00000483020 NCOA3Q9Y6Q9 1424 aa20.32■□□□□ 0.84
TSC2-213ENST00000483020 SPATA31A6Q5VVP1 1343 aa20.31■□□□□ 0.84
TSC2-213ENST00000483020 DIP2AQ14689 1571 aa20.3■□□□□ 0.84
TSC2-213ENST00000483020 ADAMTS13Q76LX8 1427 aa20.29■□□□□ 0.84
TSC2-213ENST00000483020 ANKRD50Q9ULJ7 1429 aa20.29■□□□□ 0.84
TSC2-213ENST00000483020 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
TSC2-213ENST00000483020 UPF1Q92900 1129 aaKnown RBP eCLIP20.28■□□□□ 0.84
TSC2-213ENST00000483020 TBX22Q9Y458 520 aa20.28■□□□□ 0.84
TSC2-213ENST00000483020 E9PCH4 1651 aa20.28■□□□□ 0.84
TSC2-213ENST00000483020 UNC13BO14795 1591 aa20.27■□□□□ 0.84
TSC2-213ENST00000483020 ZNF772Q68DY9 489 aaPredicted RBP20.27■□□□□ 0.84
TSC2-213ENST00000483020 C14orf37Q86TY3 774 aa20.27■□□□□ 0.84
TSC2-213ENST00000483020 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
TSC2-213ENST00000483020 HDGFP51858 240 aaKnown RBP20.25■□□□□ 0.83
TSC2-213ENST00000483020 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
TSC2-213ENST00000483020 TRPM2O94759 1503 aa20.23■□□□□ 0.83
TSC2-213ENST00000483020 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
TSC2-213ENST00000483020 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
TSC2-213ENST00000483020 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
TSC2-213ENST00000483020 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.22■□□□□ 0.83
TSC2-213ENST00000483020 C19orf44Q9H6X5 657 aa20.22■□□□□ 0.83
TSC2-213ENST00000483020 ATF3P18847 181 aa20.21■□□□□ 0.83
TSC2-213ENST00000483020 PTPRUQ92729 1446 aa20.2■□□□□ 0.82
TSC2-213ENST00000483020 NHSL1Q5SYE7 1610 aa20.2■□□□□ 0.82
TSC2-213ENST00000483020 XRN1Q8IZH2 1706 aaKnown RBP20.19■□□□□ 0.82
TSC2-213ENST00000483020 CDK12Q9NYV4 1490 aaPredicted RBP20.19■□□□□ 0.82
TSC2-213ENST00000483020 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
TSC2-213ENST00000483020 BRINP3Q76B58 766 aa20.19■□□□□ 0.82
TSC2-213ENST00000483020 IQGAP3Q86VI3 1631 aa20.19■□□□□ 0.82
TSC2-213ENST00000483020 NRXN3Q9Y4C0 1643 aa20.18■□□□□ 0.82
TSC2-213ENST00000483020 RXRBP28702 533 aa20.18■□□□□ 0.82
TSC2-213ENST00000483020 DCCP43146 1447 aa20.17■□□□□ 0.82
TSC2-213ENST00000483020 NUTM2BA6NNL0 878 aaPredicted RBP20.16■□□□□ 0.82
TSC2-213ENST00000483020 NUTM2EB1AL46 878 aaPredicted RBP20.16■□□□□ 0.82
TSC2-213ENST00000483020 NUTM2AQ8IVF1 878 aaPredicted RBP20.16■□□□□ 0.82
TSC2-213ENST00000483020 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
TSC2-213ENST00000483020 SETD5Q9C0A6 1442 aa20.14■□□□□ 0.81
TSC2-213ENST00000483020 AFF2P51816 1311 aa20.14■□□□□ 0.81
TSC2-213ENST00000483020 MST1RQ04912 1400 aa20.13■□□□□ 0.81
TSC2-213ENST00000483020 RRBP1Q9P2E9 1410 aaKnown RBP20.13■□□□□ 0.81
TSC2-213ENST00000483020 SETBP1Q9Y6X0 1596 aa20.12■□□□□ 0.81
TSC2-213ENST00000483020 ROCK1Q13464 1354 aa20.12■□□□□ 0.81
TSC2-213ENST00000483020 RGS12O14924 1447 aa20.11■□□□□ 0.81
TSC2-213ENST00000483020 ITGAEP38570 1179 aa20.11■□□□□ 0.81
TSC2-213ENST00000483020 SRCAPQ6ZRS2 3230 aa20.1■□□□□ 0.81
TSC2-213ENST00000483020 NALCNQ8IZF0 1738 aa20.1■□□□□ 0.81
TSC2-213ENST00000483020 SPHKAPQ2M3C7 1700 aa20.09■□□□□ 0.81
TSC2-213ENST00000483020 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
TSC2-213ENST00000483020 ADGRL3Q9HAR2 1447 aa20.05■□□□□ 0.8
TSC2-213ENST00000483020 DDX17Q92841 729 aaKnown RBP20.05■□□□□ 0.8
TSC2-213ENST00000483020 C8orf37Q96NL8 207 aa20.05■□□□□ 0.8
TSC2-213ENST00000483020 METP08581 1390 aa20.05■□□□□ 0.8
TSC2-213ENST00000483020 LRRC59Q96AG4 307 aaKnown RBP20.04■□□□□ 0.8
TSC2-213ENST00000483020 NUP155O75694 1391 aa20.04■□□□□ 0.8
TSC2-213ENST00000483020 RBM6P78332 1123 aaKnown RBP20.02■□□□□ 0.8
TSC2-213ENST00000483020 QTRT2Q9H974 415 aaKnown RBP20.02■□□□□ 0.8
TSC2-213ENST00000483020 LAMC1P11047 1609 aa20.02■□□□□ 0.79
TSC2-213ENST00000483020 NEXMIFQ5QGS0 1516 aa20■□□□□ 0.79
TSC2-213ENST00000483020 CLTCL1P53675 1640 aa19.98■□□□□ 0.79
TSC2-213ENST00000483020 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
TSC2-213ENST00000483020 C1orf167Q5SNV9 1468 aa19.98■□□□□ 0.79
TSC2-213ENST00000483020 EP400Q96L91 3159 aa19.96■□□□□ 0.79
TSC2-213ENST00000483020 KIF1BO60333 1816 aa19.95■□□□□ 0.78
TSC2-213ENST00000483020 ADAMTS2O95450 1211 aa19.95■□□□□ 0.78
TSC2-213ENST00000483020 NGLY1Q96IV0 654 aa19.94■□□□□ 0.78
TSC2-213ENST00000483020 ATAD2Q6PL18 1390 aa19.94■□□□□ 0.78
TSC2-213ENST00000483020 PTCH1Q13635 1447 aa19.93■□□□□ 0.78
TSC2-213ENST00000483020 COL22A1Q8NFW1 1626 aaPredicted RBP19.92■□□□□ 0.78
TSC2-213ENST00000483020 SOS2Q07890 1332 aaPredicted RBP19.9■□□□□ 0.78
TSC2-213ENST00000483020 NAIPQ13075 1403 aa19.9■□□□□ 0.78
TSC2-213ENST00000483020 USP21Q9UK80 565 aa19.89■□□□□ 0.77
TSC2-213ENST00000483020 MARF1Q9Y4F3 1742 aaKnown RBP19.89■□□□□ 0.77
TSC2-213ENST00000483020 ATRNO75882 1429 aa19.88■□□□□ 0.77
TSC2-213ENST00000483020 ROBO2Q9HCK4 1378 aa19.88■□□□□ 0.77
TSC2-213ENST00000483020 ORAI2Q96SN7 254 aa19.88■□□□□ 0.77
TSC2-213ENST00000483020 HFM1A2PYH4 1435 aa19.87■□□□□ 0.77
TSC2-213ENST00000483020 TRPC5Q9UL62 973 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms