RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
TMEM54-206ENST00000482771 CHGAP10645 457 aaKnown RBP19.9■□□□□ 0.78
TMEM54-206ENST00000482771 KDM5AP29375 1690 aaKnown RBP19.89■□□□□ 0.77
TMEM54-206ENST00000482771 ROBO1Q9Y6N7 1651 aa19.88■□□□□ 0.77
TMEM54-206ENST00000482771 NUTM2DQ5VT03 806 aaPredicted RBP19.88■□□□□ 0.77
TMEM54-206ENST00000482771 TBX22Q9Y458 520 aa19.88■□□□□ 0.77
TMEM54-206ENST00000482771 C14orf37Q86TY3 774 aa19.87■□□□□ 0.77
TMEM54-206ENST00000482771 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
TMEM54-206ENST00000482771 ANKRD50Q9ULJ7 1429 aa19.86■□□□□ 0.77
TMEM54-206ENST00000482771 PLEKHG1Q9ULL1 1385 aa19.86■□□□□ 0.77
TMEM54-206ENST00000482771 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
TMEM54-206ENST00000482771 RIMS2Q9UQ26 1411 aa19.85■□□□□ 0.77
TMEM54-206ENST00000482771 JCADQ9P266 1359 aa19.85■□□□□ 0.77
TMEM54-206ENST00000482771 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.85■□□□□ 0.77
TMEM54-206ENST00000482771 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
TMEM54-206ENST00000482771 ADGRL2O95490 1459 aa19.82■□□□□ 0.76
TMEM54-206ENST00000482771 RPRD2Q5VT52 1461 aaKnown RBP19.82■□□□□ 0.76
TMEM54-206ENST00000482771 C19orf44Q9H6X5 657 aa19.82■□□□□ 0.76
TMEM54-206ENST00000482771 NWD1Q149M9 1564 aa19.81■□□□□ 0.76
TMEM54-206ENST00000482771 ATF3P18847 181 aa19.8■□□□□ 0.76
TMEM54-206ENST00000482771 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
TMEM54-206ENST00000482771 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
TMEM54-206ENST00000482771 NCOA3Q9Y6Q9 1424 aa19.77■□□□□ 0.76
TMEM54-206ENST00000482771 PHLPP1O60346 1717 aa19.77■□□□□ 0.76
TMEM54-206ENST00000482771 CHD2O14647 1828 aaKnown RBP19.77■□□□□ 0.76
TMEM54-206ENST00000482771 AMOTL2Q9Y2J4 779 aa19.77■□□□□ 0.76
TMEM54-206ENST00000482771 SPATA31A6Q5VVP1 1343 aa19.76■□□□□ 0.75
TMEM54-206ENST00000482771 ZNF772Q68DY9 489 aaPredicted RBP19.75■□□□□ 0.75
TMEM54-206ENST00000482771 ADAMTS13Q76LX8 1427 aa19.75■□□□□ 0.75
TMEM54-206ENST00000482771 TMEM131LA2VDJ0 1609 aa19.74■□□□□ 0.75
TMEM54-206ENST00000482771 MYO5BQ9ULV0 1848 aa19.74■□□□□ 0.75
TMEM54-206ENST00000482771 TRIM52Q96A61 297 aa19.73■□□□□ 0.75
TMEM54-206ENST00000482771 NUTM2BA6NNL0 878 aaPredicted RBP19.72■□□□□ 0.75
TMEM54-206ENST00000482771 NUTM2EB1AL46 878 aaPredicted RBP19.72■□□□□ 0.75
TMEM54-206ENST00000482771 NUTM2AQ8IVF1 878 aaPredicted RBP19.72■□□□□ 0.75
TMEM54-206ENST00000482771 PIK3R4Q99570 1358 aa19.71■□□□□ 0.75
TMEM54-206ENST00000482771 BRINP3Q76B58 766 aa19.71■□□□□ 0.75
TMEM54-206ENST00000482771 NUP155O75694 1391 aa19.7■□□□□ 0.74
TMEM54-206ENST00000482771 ITGAEP38570 1179 aa19.7■□□□□ 0.74
TMEM54-206ENST00000482771 UPF1Q92900 1129 aaKnown RBP eCLIP19.7■□□□□ 0.74
TMEM54-206ENST00000482771 GCC2Q8IWJ2 1684 aa19.7■□□□□ 0.74
TMEM54-206ENST00000482771 LRP6O75581 1613 aa19.69■□□□□ 0.74
TMEM54-206ENST00000482771 COL16A1Q07092 1604 aaPredicted RBP19.69■□□□□ 0.74
TMEM54-206ENST00000482771 RXRBP28702 533 aa19.68■□□□□ 0.74
TMEM54-206ENST00000482771 PTPRUQ92729 1446 aa19.67■□□□□ 0.74
TMEM54-206ENST00000482771 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
TMEM54-206ENST00000482771 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.65■□□□□ 0.74
TMEM54-206ENST00000482771 ZNF326Q5BKZ1 582 aaKnown RBP19.65■□□□□ 0.74
TMEM54-206ENST00000482771 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
TMEM54-206ENST00000482771 E9PCH4 1651 aa19.63■□□□□ 0.73
TMEM54-206ENST00000482771 UNC13BO14795 1591 aa19.62■□□□□ 0.73
TMEM54-206ENST00000482771 LRRC59Q96AG4 307 aaKnown RBP19.62■□□□□ 0.73
TMEM54-206ENST00000482771 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
TMEM54-206ENST00000482771 DIP2AQ14689 1571 aa19.61■□□□□ 0.73
TMEM54-206ENST00000482771 TRPM2O94759 1503 aa19.61■□□□□ 0.73
TMEM54-206ENST00000482771 AFF2P51816 1311 aa19.6■□□□□ 0.73
TMEM54-206ENST00000482771 PPARGC1BQ86YN6 1023 aaKnown RBP19.6■□□□□ 0.73
TMEM54-206ENST00000482771 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
TMEM54-206ENST00000482771 METP08581 1390 aa19.58■□□□□ 0.73
TMEM54-206ENST00000482771 QTRT2Q9H974 415 aaKnown RBP19.57■□□□□ 0.72
TMEM54-206ENST00000482771 IQGAP3Q86VI3 1631 aa19.56■□□□□ 0.72
TMEM54-206ENST00000482771 C8orf37Q96NL8 207 aa19.56■□□□□ 0.72
TMEM54-206ENST00000482771 DCCP43146 1447 aa19.56■□□□□ 0.72
TMEM54-206ENST00000482771 SHPRHQ149N8 1683 aa19.56■□□□□ 0.72
TMEM54-206ENST00000482771 MST1RQ04912 1400 aa19.55■□□□□ 0.72
TMEM54-206ENST00000482771 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
TMEM54-206ENST00000482771 ASXL1Q8IXJ9 1541 aa19.53■□□□□ 0.72
TMEM54-206ENST00000482771 RBM6P78332 1123 aaKnown RBP19.52■□□□□ 0.72
TMEM54-206ENST00000482771 NGLY1Q96IV0 654 aa19.52■□□□□ 0.72
TMEM54-206ENST00000482771 ADAMTS2O95450 1211 aa19.51■□□□□ 0.71
TMEM54-206ENST00000482771 SETBP1Q9Y6X0 1596 aa19.49■□□□□ 0.71
TMEM54-206ENST00000482771 CDK12Q9NYV4 1490 aaPredicted RBP19.49■□□□□ 0.71
TMEM54-206ENST00000482771 PNPLA6Q8IY17 1366 aa19.48■□□□□ 0.71
TMEM54-206ENST00000482771 NRXN3Q9Y4C0 1643 aa19.48■□□□□ 0.71
TMEM54-206ENST00000482771 ORAI2Q96SN7 254 aa19.48■□□□□ 0.71
TMEM54-206ENST00000482771 VGFO15240 615 aaPredicted RBP19.47■□□□□ 0.71
TMEM54-206ENST00000482771 ADGRL3Q9HAR2 1447 aa19.47■□□□□ 0.71
TMEM54-206ENST00000482771 XRN1Q8IZH2 1706 aaKnown RBP19.47■□□□□ 0.71
TMEM54-206ENST00000482771 C1orf167Q5SNV9 1468 aa19.44■□□□□ 0.7
TMEM54-206ENST00000482771 USP21Q9UK80 565 aa19.43■□□□□ 0.7
TMEM54-206ENST00000482771 NHSL1Q5SYE7 1610 aa19.42■□□□□ 0.7
TMEM54-206ENST00000482771 SOS2Q07890 1332 aaPredicted RBP19.42■□□□□ 0.7
TMEM54-206ENST00000482771 ROBO2Q9HCK4 1378 aa19.42■□□□□ 0.7
TMEM54-206ENST00000482771 SPHKAPQ2M3C7 1700 aa19.42■□□□□ 0.7
TMEM54-206ENST00000482771 RGS12O14924 1447 aa19.42■□□□□ 0.7
TMEM54-206ENST00000482771 NEXMIFQ5QGS0 1516 aa19.4■□□□□ 0.7
TMEM54-206ENST00000482771 TRPC5Q9UL62 973 aaPredicted RBP19.39■□□□□ 0.69
TMEM54-206ENST00000482771 RPGRIP1LQ68CZ1 1315 aa19.38■□□□□ 0.69
TMEM54-206ENST00000482771 FNBP4Q8N3X1 1017 aaPredicted RBP19.38■□□□□ 0.69
TMEM54-206ENST00000482771 CLTCL1P53675 1640 aa19.37■□□□□ 0.69
TMEM54-206ENST00000482771 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
TMEM54-206ENST00000482771 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
TMEM54-206ENST00000482771 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
TMEM54-206ENST00000482771 NAIPQ13075 1403 aa19.34■□□□□ 0.69
TMEM54-206ENST00000482771 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
TMEM54-206ENST00000482771 FOXO3O43524 673 aa19.33■□□□□ 0.68
TMEM54-206ENST00000482771 XPCQ01831 940 aaPredicted RBP19.33■□□□□ 0.68
TMEM54-206ENST00000482771 ATAD2Q6PL18 1390 aa19.32■□□□□ 0.68
TMEM54-206ENST00000482771 STK26Q9P289 416 aa19.32■□□□□ 0.68
TMEM54-206ENST00000482771 SRCAPQ6ZRS2 3230 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms