RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 MAP3K7O43318 606 aa15.02■□□□□ -0
LIMK2-209ENST00000482270 DIP2BQ9P265 1576 aa15.02□□□□□ -0.01
LIMK2-209ENST00000482270 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
LIMK2-209ENST00000482270 EPAS1Q99814 870 aa15.01□□□□□ -0.01
LIMK2-209ENST00000482270 PRIM1P49642 420 aaKnown RBP15□□□□□ -0.01
LIMK2-209ENST00000482270 ANKRD13DQ6ZTN6 518 aa15□□□□□ -0.01
LIMK2-209ENST00000482270 KCNH8Q96L42 1107 aa15□□□□□ -0.01
LIMK2-209ENST00000482270 ARHGAP33O14559 1287 aa14.99□□□□□ -0.01
LIMK2-209ENST00000482270 PTPREP23469 700 aa14.99□□□□□ -0.01
LIMK2-209ENST00000482270 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
LIMK2-209ENST00000482270 BCL2L12Q9HB09 334 aa14.99□□□□□ -0.01
LIMK2-209ENST00000482270 PRXQ9BXM0 1461 aa14.99□□□□□ -0.01
LIMK2-209ENST00000482270 TSR1Q2NL82 804 aaKnown RBP14.98□□□□□ -0.01
LIMK2-209ENST00000482270 DMRTA1Q5VZB9 504 aa14.98□□□□□ -0.01
LIMK2-209ENST00000482270 ABCC10Q5T3U5 1492 aa14.97□□□□□ -0.01
LIMK2-209ENST00000482270 PBX2P40425 430 aa14.97□□□□□ -0.01
LIMK2-209ENST00000482270 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
LIMK2-209ENST00000482270 OSBPP22059 807 aa14.96□□□□□ -0.01
LIMK2-209ENST00000482270 LSM11P83369 360 aaKnown RBP eCLIP14.95□□□□□ -0.02
LIMK2-209ENST00000482270 FAM69CQ0P6D2 419 aa14.95□□□□□ -0.02
LIMK2-209ENST00000482270 ABCC2Q92887 1545 aa14.95□□□□□ -0.02
LIMK2-209ENST00000482270 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
LIMK2-209ENST00000482270 PCDH10Q9P2E7 1040 aa14.94□□□□□ -0.02
LIMK2-209ENST00000482270 UACAQ9BZF9 1416 aa14.93□□□□□ -0.02
LIMK2-209ENST00000482270 C6orf132Q5T0Z8 1188 aa14.93□□□□□ -0.02
LIMK2-209ENST00000482270 CDHR5Q9HBB8 845 aa14.93□□□□□ -0.02
LIMK2-209ENST00000482270 TESPA1A2RU30 521 aaPredicted RBP14.92□□□□□ -0.02
LIMK2-209ENST00000482270 UHRF1BP1LA0JNW5 1464 aa14.91□□□□□ -0.02
LIMK2-209ENST00000482270 COL9A1P20849 921 aa14.91□□□□□ -0.02
LIMK2-209ENST00000482270 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
LIMK2-209ENST00000482270 GOLGA3Q08378 1498 aa14.89□□□□□ -0.03
LIMK2-209ENST00000482270 ASXL2Q76L83 1435 aa14.89□□□□□ -0.03
LIMK2-209ENST00000482270 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
LIMK2-209ENST00000482270 PPRC1Q5VV67 1664 aaKnown RBP14.87□□□□□ -0.03
LIMK2-209ENST00000482270 RBM26Q5T8P6 1007 aaKnown RBP14.87□□□□□ -0.03
LIMK2-209ENST00000482270 KDM5BQ9UGL1 1544 aa14.87□□□□□ -0.03
LIMK2-209ENST00000482270 EEA1Q15075 1411 aa14.86□□□□□ -0.03
LIMK2-209ENST00000482270 NUTM2FA1L443 756 aa14.86□□□□□ -0.03
LIMK2-209ENST00000482270 PPP1R3GB7ZBB8 358 aa14.86□□□□□ -0.03
LIMK2-209ENST00000482270 ABCA8O94911 1581 aa14.85□□□□□ -0.03
LIMK2-209ENST00000482270 KDM6BO15054 1643 aa14.85□□□□□ -0.03
LIMK2-209ENST00000482270 PROX2Q3B8N5 592 aa14.85□□□□□ -0.03
LIMK2-209ENST00000482270 SAMD9Q5K651 1589 aa14.85□□□□□ -0.03
LIMK2-209ENST00000482270 ADGRD1Q6QNK2 874 aa14.84□□□□□ -0.03
LIMK2-209ENST00000482270 RANGAP1P46060 587 aaPredicted RBP14.83□□□□□ -0.04
LIMK2-209ENST00000482270 SMYD5Q6GMV2 418 aa14.83□□□□□ -0.04
LIMK2-209ENST00000482270 KIF21BO75037 1637 aa14.83□□□□□ -0.04
LIMK2-209ENST00000482270 GLI2P10070 1586 aa14.82□□□□□ -0.04
LIMK2-209ENST00000482270 MAP3K4Q9Y6R4 1608 aa14.82□□□□□ -0.04
LIMK2-209ENST00000482270 ZBED2Q9BTP6 218 aa14.81□□□□□ -0.04
LIMK2-209ENST00000482270 PLSCR2Q9NRY7 297 aa14.81□□□□□ -0.04
LIMK2-209ENST00000482270 EPRSP07814 1512 aaKnown RBP14.81□□□□□ -0.04
LIMK2-209ENST00000482270 ARID3CA6NKF2 412 aa14.79□□□□□ -0.04
LIMK2-209ENST00000482270 VPS9D1Q9Y2B5 631 aa14.79□□□□□ -0.04
LIMK2-209ENST00000482270 TULP1O00294 542 aaPredicted RBP14.78□□□□□ -0.04
LIMK2-209ENST00000482270 SPNS2Q8IVW8 549 aa14.78□□□□□ -0.04
LIMK2-209ENST00000482270 RAPGEF6Q8TEU7 1601 aa14.77□□□□□ -0.04
LIMK2-209ENST00000482270 WDR7Q9Y4E6 1490 aa14.77□□□□□ -0.04
LIMK2-209ENST00000482270 STAC3Q96MF2 364 aa14.74□□□□□ -0.05
LIMK2-209ENST00000482270 CFAP43Q8NDM7 1665 aa14.74□□□□□ -0.05
LIMK2-209ENST00000482270 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
LIMK2-209ENST00000482270 TK2O00142 265 aa14.73□□□□□ -0.05
LIMK2-209ENST00000482270 CDCA7LQ96GN5 454 aa14.72□□□□□ -0.05
LIMK2-209ENST00000482270 GPIHBP1Q8IV16 184 aa14.71□□□□□ -0.05
LIMK2-209ENST00000482270 NPDC1Q9NQX5 325 aaPredicted RBP14.71□□□□□ -0.05
LIMK2-209ENST00000482270 KIAA1468Q9P260 1216 aa14.71□□□□□ -0.05
LIMK2-209ENST00000482270 TSKSQ9UJT2 592 aa14.71□□□□□ -0.05
LIMK2-209ENST00000482270 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
LIMK2-209ENST00000482270 PRSS12P56730 875 aa14.7□□□□□ -0.06
LIMK2-209ENST00000482270 PTGDRQ13258 359 aa14.7□□□□□ -0.06
LIMK2-209ENST00000482270 PADI6Q6TGC4 694 aa14.7□□□□□ -0.06
LIMK2-209ENST00000482270 SEPT9Q9UHD8 586 aaPredicted RBP14.7□□□□□ -0.06
LIMK2-209ENST00000482270 ATP10BO94823 1461 aa14.69□□□□□ -0.06
LIMK2-209ENST00000482270 CERKQ8TCT0 537 aa14.69□□□□□ -0.06
LIMK2-209ENST00000482270 EFCAB5A4FU69 1503 aa14.69□□□□□ -0.06
LIMK2-209ENST00000482270 HRO43593 1189 aa14.68□□□□□ -0.06
LIMK2-209ENST00000482270 LMOD2Q6P5Q4 547 aa14.68□□□□□ -0.06
LIMK2-209ENST00000482270 SLC4A5Q9BY07 1137 aa14.68□□□□□ -0.06
LIMK2-209ENST00000482270 FAM198AQ9UFP1 575 aa14.68□□□□□ -0.06
LIMK2-209ENST00000482270 MYT1LQ9UL68 1186 aa14.68□□□□□ -0.06
LIMK2-209ENST00000482270 TEX14Q8IWB6 1497 aa14.68□□□□□ -0.06
LIMK2-209ENST00000482270 SMAPO00193 183 aa14.67□□□□□ -0.06
LIMK2-209ENST00000482270 FCHSD2O94868 740 aa14.67□□□□□ -0.06
LIMK2-209ENST00000482270 NUP153P49790 1475 aaKnown RBP14.66□□□□□ -0.06
LIMK2-209ENST00000482270 COL17A1Q9UMD9 1497 aaPredicted RBP14.66□□□□□ -0.06
LIMK2-209ENST00000482270 UBTFP17480 764 aaKnown RBP14.66□□□□□ -0.06
LIMK2-209ENST00000482270 NBPF3Q9H094 633 aa14.66□□□□□ -0.06
LIMK2-209ENST00000482270 MMRN1Q13201 1228 aa14.65□□□□□ -0.06
LIMK2-209ENST00000482270 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
LIMK2-209ENST00000482270 BCANQ96GW7 911 aa14.65□□□□□ -0.06
LIMK2-209ENST00000482270 RABGEF1Q9UJ41 708 aa14.65□□□□□ -0.06
LIMK2-209ENST00000482270 CD109Q6YHK3 1445 aa14.65□□□□□ -0.06
LIMK2-209ENST00000482270 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.64□□□□□ -0.07
LIMK2-209ENST00000482270 ABCA9Q8IUA7 1624 aa14.63□□□□□ -0.07
LIMK2-209ENST00000482270 PACS2Q86VP3 889 aa14.63□□□□□ -0.07
LIMK2-209ENST00000482270 C3orf80F5H4A9 247 aa14.62□□□□□ -0.07
LIMK2-209ENST00000482270 FAM161AQ3B820 660 aa14.62□□□□□ -0.07
LIMK2-209ENST00000482270 MAGI3Q5TCQ9 1506 aa14.61□□□□□ -0.07
LIMK2-209ENST00000482270 GOLGA8CPA6NN73 597 aa14.61□□□□□ -0.07
LIMK2-209ENST00000482270 RNF166Q96A37 237 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms