RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
SORT1-204ENST00000482236 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
SORT1-204ENST00000482236 NAIPQ13075 1403 aa16.79■□□□□ 0.28
SORT1-204ENST00000482236 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
SORT1-204ENST00000482236 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
SORT1-204ENST00000482236 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
SORT1-204ENST00000482236 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
SORT1-204ENST00000482236 LRRC7Q96NW7 1537 aa16.74■□□□□ 0.27
SORT1-204ENST00000482236 DISP3Q9P2K9 1392 aa16.74■□□□□ 0.27
SORT1-204ENST00000482236 PLEKHG1Q9ULL1 1385 aa16.74■□□□□ 0.27
SORT1-204ENST00000482236 TMEM131LA2VDJ0 1609 aa16.74■□□□□ 0.27
SORT1-204ENST00000482236 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
SORT1-204ENST00000482236 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
SORT1-204ENST00000482236 KCNA6P17658 529 aa16.71■□□□□ 0.27
SORT1-204ENST00000482236 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
SORT1-204ENST00000482236 TMEM94Q12767 1356 aa16.69■□□□□ 0.26
SORT1-204ENST00000482236 STRCP1A6NGW2 1772 aa16.69■□□□□ 0.26
SORT1-204ENST00000482236 RBM33Q96EV2 1170 aaKnown RBP16.68■□□□□ 0.26
SORT1-204ENST00000482236 TRPM2O94759 1503 aa16.68■□□□□ 0.26
SORT1-204ENST00000482236 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
SORT1-204ENST00000482236 MSH6P52701 1360 aa16.67■□□□□ 0.26
SORT1-204ENST00000482236 HSPA1LP34931 641 aa16.67■□□□□ 0.26
SORT1-204ENST00000482236 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
SORT1-204ENST00000482236 CLTCL1P53675 1640 aa16.64■□□□□ 0.25
SORT1-204ENST00000482236 TBX22Q9Y458 520 aa16.64■□□□□ 0.25
SORT1-204ENST00000482236 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
SORT1-204ENST00000482236 FOXD1Q16676 465 aa16.62■□□□□ 0.25
SORT1-204ENST00000482236 NWD1Q149M9 1564 aa16.62■□□□□ 0.25
SORT1-204ENST00000482236 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
SORT1-204ENST00000482236 KIF1BO60333 1816 aa16.61■□□□□ 0.25
SORT1-204ENST00000482236 PHF23Q9BUL5 403 aaPredicted RBP16.61■□□□□ 0.25
SORT1-204ENST00000482236 SETD5Q9C0A6 1442 aa16.61■□□□□ 0.25
SORT1-204ENST00000482236 VGFO15240 615 aaPredicted RBP16.58■□□□□ 0.24
SORT1-204ENST00000482236 ATF3P18847 181 aa16.58■□□□□ 0.24
SORT1-204ENST00000482236 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.24
SORT1-204ENST00000482236 AMOTL2Q9Y2J4 779 aa16.58■□□□□ 0.24
SORT1-204ENST00000482236 PIK3R4Q99570 1358 aa16.58■□□□□ 0.24
SORT1-204ENST00000482236 ADAMTS13Q76LX8 1427 aa16.58■□□□□ 0.24
SORT1-204ENST00000482236 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
SORT1-204ENST00000482236 NEXMIFQ5QGS0 1516 aa16.55■□□□□ 0.24
SORT1-204ENST00000482236 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
SORT1-204ENST00000482236 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
SORT1-204ENST00000482236 RPGRIP1LQ68CZ1 1315 aa16.54■□□□□ 0.24
SORT1-204ENST00000482236 CHD2O14647 1828 aaKnown RBP16.54■□□□□ 0.24
SORT1-204ENST00000482236 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
SORT1-204ENST00000482236 ALKQ9UM73 1620 aa16.53■□□□□ 0.24
SORT1-204ENST00000482236 CADPS2Q86UW7 1296 aa16.53■□□□□ 0.24
SORT1-204ENST00000482236 SLAIN2Q9P270 581 aa16.52■□□□□ 0.24
SORT1-204ENST00000482236 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
SORT1-204ENST00000482236 ROBO1Q9Y6N7 1651 aa16.5■□□□□ 0.23
SORT1-204ENST00000482236 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
SORT1-204ENST00000482236 FAM135BQ49AJ0 1406 aa16.5■□□□□ 0.23
SORT1-204ENST00000482236 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
SORT1-204ENST00000482236 METP08581 1390 aa16.5■□□□□ 0.23
SORT1-204ENST00000482236 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
SORT1-204ENST00000482236 PTPRUQ92729 1446 aa16.48■□□□□ 0.23
SORT1-204ENST00000482236 ANKRD30BQ9BXX2 1392 aa16.46■□□□□ 0.23
SORT1-204ENST00000482236 XRN1Q8IZH2 1706 aaKnown RBP16.45■□□□□ 0.22
SORT1-204ENST00000482236 STK26Q9P289 416 aa16.44■□□□□ 0.22
SORT1-204ENST00000482236 PPLO60437 1756 aa16.43■□□□□ 0.22
SORT1-204ENST00000482236 PHLPP1O60346 1717 aa16.43■□□□□ 0.22
SORT1-204ENST00000482236 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.43■□□□□ 0.22
SORT1-204ENST00000482236 DCCP43146 1447 aa16.43■□□□□ 0.22
SORT1-204ENST00000482236 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
SORT1-204ENST00000482236 ILDR2Q71H61 639 aa16.42■□□□□ 0.22
SORT1-204ENST00000482236 ADGRL3Q9HAR2 1447 aa16.42■□□□□ 0.22
SORT1-204ENST00000482236 ADGRF5Q8IZF2 1346 aa16.42■□□□□ 0.22
SORT1-204ENST00000482236 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
SORT1-204ENST00000482236 SPATA31E1Q6ZUB1 1445 aa16.4■□□□□ 0.22
SORT1-204ENST00000482236 JCADQ9P266 1359 aa16.39■□□□□ 0.21
SORT1-204ENST00000482236 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
SORT1-204ENST00000482236 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
SORT1-204ENST00000482236 KDM2AQ9Y2K7 1162 aa16.36■□□□□ 0.21
SORT1-204ENST00000482236 NALCNQ8IZF0 1738 aa16.36■□□□□ 0.21
SORT1-204ENST00000482236 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
SORT1-204ENST00000482236 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
SORT1-204ENST00000482236 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
SORT1-204ENST00000482236 MST1RQ04912 1400 aa16.35■□□□□ 0.21
SORT1-204ENST00000482236 NUTM2BA6NNL0 878 aaPredicted RBP16.34■□□□□ 0.21
SORT1-204ENST00000482236 NUTM2EB1AL46 878 aaPredicted RBP16.34■□□□□ 0.21
SORT1-204ENST00000482236 SOCS7O14512 581 aa16.34■□□□□ 0.21
SORT1-204ENST00000482236 NUTM2AQ8IVF1 878 aaPredicted RBP16.34■□□□□ 0.21
SORT1-204ENST00000482236 HRCP23327 699 aa16.33■□□□□ 0.2
SORT1-204ENST00000482236 DCAF11Q8TEB1 546 aa16.33■□□□□ 0.2
SORT1-204ENST00000482236 DHX57Q6P158 1386 aaKnown RBP16.33■□□□□ 0.2
SORT1-204ENST00000482236 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.2
SORT1-204ENST00000482236 IFT172Q9UG01 1749 aa16.33■□□□□ 0.2
SORT1-204ENST00000482236 LRPPRCP42704 1394 aaKnown RBP16.32■□□□□ 0.2
SORT1-204ENST00000482236 MYOM2P54296 1465 aa16.32■□□□□ 0.2
SORT1-204ENST00000482236 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
SORT1-204ENST00000482236 LAMC1P11047 1609 aa16.31■□□□□ 0.2
SORT1-204ENST00000482236 COL16A1Q07092 1604 aaPredicted RBP16.31■□□□□ 0.2
SORT1-204ENST00000482236 SPATA31A6Q5VVP1 1343 aa16.31■□□□□ 0.2
SORT1-204ENST00000482236 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
SORT1-204ENST00000482236 POGKQ9P215 609 aa16.31■□□□□ 0.2
SORT1-204ENST00000482236 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
SORT1-204ENST00000482236 SAFB2Q14151 953 aaKnown RBP eCLIP16.3■□□□□ 0.2
SORT1-204ENST00000482236 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
SORT1-204ENST00000482236 CFAP70Q5T0N1 1121 aa16.3■□□□□ 0.2
SORT1-204ENST00000482236 WAPLQ7Z5K2 1190 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms