RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 MYO5BQ9ULV0 1848 aa28.02■■■□□ 2.08
SEMA4D-218ENST00000482128 ZEB1P37275 1124 aaPredicted RBP28.02■■■□□ 2.08
SEMA4D-218ENST00000482128 SLIT1O75093 1534 aa28.01■■■□□ 2.07
SEMA4D-218ENST00000482128 NEXMIFQ5QGS0 1516 aa28.01■■■□□ 2.07
SEMA4D-218ENST00000482128 EID1Q9Y6B2 187 aa28■■■□□ 2.07
SEMA4D-218ENST00000482128 LMTK3Q96Q04 1460 aa28■■■□□ 2.07
SEMA4D-218ENST00000482128 ARHGAP23Q9P227 1491 aa28■■■□□ 2.07
SEMA4D-218ENST00000482128 VGFO15240 615 aaPredicted RBP27.99■■■□□ 2.07
SEMA4D-218ENST00000482128 ZFYVE9O95405 1425 aa27.99■■■□□ 2.07
SEMA4D-218ENST00000482128 MYOM2P54296 1465 aa27.98■■■□□ 2.07
SEMA4D-218ENST00000482128 PPP1R15AO75807 674 aaPredicted RBP27.98■■■□□ 2.07
SEMA4D-218ENST00000482128 KDM2AQ9Y2K7 1162 aa27.97■■■□□ 2.07
SEMA4D-218ENST00000482128 PPLO60437 1756 aa27.96■■■□□ 2.07
SEMA4D-218ENST00000482128 IFT172Q9UG01 1749 aa27.95■■■□□ 2.07
SEMA4D-218ENST00000482128 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
SEMA4D-218ENST00000482128 TXNDC2Q86VQ3 553 aa27.93■■■□□ 2.06
SEMA4D-218ENST00000482128 ANKLE2Q86XL3 938 aa27.93■■■□□ 2.06
SEMA4D-218ENST00000482128 SCAF11Q99590 1463 aaKnown RBP27.92■■■□□ 2.06
SEMA4D-218ENST00000482128 NUTM2DQ5VT03 806 aaPredicted RBP27.91■■■□□ 2.06
SEMA4D-218ENST00000482128 ADGRF5Q8IZF2 1346 aa27.89■■■□□ 2.05
SEMA4D-218ENST00000482128 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.05
SEMA4D-218ENST00000482128 LTKP29376 864 aa27.88■■■□□ 2.05
SEMA4D-218ENST00000482128 HSPA2P54652 639 aa27.88■■■□□ 2.05
SEMA4D-218ENST00000482128 PRAG1Q86YV5 1406 aa27.88■■■□□ 2.05
SEMA4D-218ENST00000482128 PLEKHG1Q9ULL1 1385 aa27.86■■■□□ 2.05
SEMA4D-218ENST00000482128 PIK3C2GO75747 1445 aa27.85■■■□□ 2.05
SEMA4D-218ENST00000482128 BCANQ96GW7 911 aa27.83■■■□□ 2.05
SEMA4D-218ENST00000482128 POLR1AO95602 1720 aaPredicted RBP27.81■■■□□ 2.04
SEMA4D-218ENST00000482128 MED14O60244 1454 aa27.8■■■□□ 2.04
SEMA4D-218ENST00000482128 SETBP1Q9Y6X0 1596 aa27.79■■■□□ 2.04
SEMA4D-218ENST00000482128 NCKAP5LQ9HCH0 1330 aa27.79■■■□□ 2.04
SEMA4D-218ENST00000482128 NPHP4O75161 1426 aaPredicted RBP27.78■■■□□ 2.04
SEMA4D-218ENST00000482128 NBPF8Q3BBV2 869 aa27.78■■■□□ 2.04
SEMA4D-218ENST00000482128 LAMC1P11047 1609 aa27.76■■■□□ 2.03
SEMA4D-218ENST00000482128 C14orf93Q9H972 538 aaKnown RBP27.75■■■□□ 2.03
SEMA4D-218ENST00000482128 SENP3Q9H4L4 574 aaPredicted RBP27.74■■■□□ 2.03
SEMA4D-218ENST00000482128 RALGAPBQ86X10 1494 aa27.74■■■□□ 2.03
SEMA4D-218ENST00000482128 DIP2AQ14689 1571 aa27.73■■■□□ 2.03
SEMA4D-218ENST00000482128 CFAP70Q5T0N1 1121 aa27.73■■■□□ 2.03
SEMA4D-218ENST00000482128 KIAA1210Q9ULL0 1709 aa27.72■■■□□ 2.03
SEMA4D-218ENST00000482128 IQGAP1P46940 1657 aa27.72■■■□□ 2.03
SEMA4D-218ENST00000482128 NRXN3Q9Y4C0 1643 aa27.72■■■□□ 2.03
SEMA4D-218ENST00000482128 ADAMTS13Q76LX8 1427 aa27.72■■■□□ 2.03
SEMA4D-218ENST00000482128 ROCK2O75116 1388 aaKnown RBP27.72■■■□□ 2.03
SEMA4D-218ENST00000482128 ALKQ9UM73 1620 aa27.71■■■□□ 2.03
SEMA4D-218ENST00000482128 TRPM1Q7Z4N2 1603 aa27.7■■■□□ 2.03
SEMA4D-218ENST00000482128 TBX22Q9Y458 520 aa27.7■■■□□ 2.02
SEMA4D-218ENST00000482128 SLC26A8Q96RN1 970 aa27.68■■■□□ 2.02
SEMA4D-218ENST00000482128 DMRT2Q9Y5R5 561 aa27.68■■■□□ 2.02
SEMA4D-218ENST00000482128 STRCQ7RTU9 1775 aa27.67■■■□□ 2.02
SEMA4D-218ENST00000482128 GPRASP1Q5JY77 1395 aa27.65■■■□□ 2.02
SEMA4D-218ENST00000482128 NBPF1Q3BBV0 1214 aa27.64■■■□□ 2.02
SEMA4D-218ENST00000482128 PIK3R4Q99570 1358 aa27.63■■■□□ 2.01
SEMA4D-218ENST00000482128 CARD11Q9BXL7 1154 aa27.63■■■□□ 2.01
SEMA4D-218ENST00000482128 SETD1AO15047 1707 aaKnown RBP27.62■■■□□ 2.01
SEMA4D-218ENST00000482128 ADGRB1O14514 1584 aa27.62■■■□□ 2.01
SEMA4D-218ENST00000482128 METP08581 1390 aa27.61■■■□□ 2.01
SEMA4D-218ENST00000482128 TMEM132EQ6IEE7 984 aa27.6■■■□□ 2.01
SEMA4D-218ENST00000482128 ASXL1Q8IXJ9 1541 aa27.6■■■□□ 2.01
SEMA4D-218ENST00000482128 LRPPRCP42704 1394 aaKnown RBP27.57■■■□□ 2
SEMA4D-218ENST00000482128 YTHDC2Q9H6S0 1430 aaKnown RBP27.57■■■□□ 2
SEMA4D-218ENST00000482128 EIF3AQ14152 1382 aaKnown RBP27.54■■■□□ 2
SEMA4D-218ENST00000482128 STK26Q9P289 416 aa27.53■■■□□ 2
SEMA4D-218ENST00000482128 ABCC11Q96J66 1382 aa27.52■■■□□ 2
SEMA4D-218ENST00000482128 AMOTL2Q9Y2J4 779 aa27.51■■□□□ 1.99
SEMA4D-218ENST00000482128 USP47Q96K76 1375 aa27.5■■□□□ 1.99
SEMA4D-218ENST00000482128 KCNA6P17658 529 aa27.5■■□□□ 1.99
SEMA4D-218ENST00000482128 TRAK1Q9UPV9 953 aa27.5■■□□□ 1.99
SEMA4D-218ENST00000482128 TECPR2O15040 1411 aa27.5■■□□□ 1.99
SEMA4D-218ENST00000482128 PTPRUQ92729 1446 aa27.5■■□□□ 1.99
SEMA4D-218ENST00000482128 DLC1Q96QB1 1528 aa27.48■■□□□ 1.99
SEMA4D-218ENST00000482128 EIF4G2P78344 907 aaKnown RBP eCLIP27.48■■□□□ 1.99
SEMA4D-218ENST00000482128 PTCH1Q13635 1447 aa27.47■■□□□ 1.99
SEMA4D-218ENST00000482128 NWD1Q149M9 1564 aa27.47■■□□□ 1.99
SEMA4D-218ENST00000482128 KNDC1Q76NI1 1749 aa27.47■■□□□ 1.99
SEMA4D-218ENST00000482128 XRN1Q8IZH2 1706 aaKnown RBP27.46■■□□□ 1.99
SEMA4D-218ENST00000482128 CPS1P31327 1500 aa27.46■■□□□ 1.99
SEMA4D-218ENST00000482128 SIRT1Q96EB6 747 aa27.45■■□□□ 1.98
SEMA4D-218ENST00000482128 CHD2O14647 1828 aaKnown RBP27.45■■□□□ 1.98
SEMA4D-218ENST00000482128 FAM135BQ49AJ0 1406 aa27.44■■□□□ 1.98
SEMA4D-218ENST00000482128 NKTRP30414 1462 aaKnown RBP27.44■■□□□ 1.98
SEMA4D-218ENST00000482128 POGKQ9P215 609 aa27.42■■□□□ 1.98
SEMA4D-218ENST00000482128 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
SEMA4D-218ENST00000482128 ROBO2Q9HCK4 1378 aa27.4■■□□□ 1.98
SEMA4D-218ENST00000482128 PRAM1Q96QH2 718 aa27.4■■□□□ 1.98
SEMA4D-218ENST00000482128 ARHGEF28Q8N1W1 1705 aaKnown RBP27.4■■□□□ 1.98
SEMA4D-218ENST00000482128 HSPA5P11021 654 aaKnown RBP27.39■■□□□ 1.98
SEMA4D-218ENST00000482128 ZNF335Q9H4Z2 1342 aaPredicted RBP27.39■■□□□ 1.97
SEMA4D-218ENST00000482128 ST20-MTHFSA0A0A6YYL1 179 aa27.37■■□□□ 1.97
SEMA4D-218ENST00000482128 SLC24A1O60721 1099 aa27.35■■□□□ 1.97
SEMA4D-218ENST00000482128 WAPLQ7Z5K2 1190 aa27.34■■□□□ 1.97
SEMA4D-218ENST00000482128 PROSER2Q86WR7 435 aaPredicted RBP27.34■■□□□ 1.97
SEMA4D-218ENST00000482128 PLEKHH1Q9ULM0 1364 aa27.33■■□□□ 1.97
SEMA4D-218ENST00000482128 SBNO2Q9Y2G9 1366 aa27.33■■□□□ 1.97
SEMA4D-218ENST00000482128 SAFB2Q14151 953 aaKnown RBP eCLIP27.32■■□□□ 1.96
SEMA4D-218ENST00000482128 STRCP1A6NGW2 1772 aa27.3■■□□□ 1.96
SEMA4D-218ENST00000482128 QRICH2Q9H0J4 1663 aa27.3■■□□□ 1.96
SEMA4D-218ENST00000482128 NCOA3Q9Y6Q9 1424 aa27.29■■□□□ 1.96
SEMA4D-218ENST00000482128 C14orf37Q86TY3 774 aa27.27■■□□□ 1.96
SEMA4D-218ENST00000482128 TMEM94Q12767 1356 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms