RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 UBR1Q8IWV7 1749 aa20.77■□□□□ 0.91
PCCB-215ENST00000482086 MYO3AQ8NEV4 1616 aa20.76■□□□□ 0.91
PCCB-215ENST00000482086 HDGFP51858 240 aaKnown RBP20.76■□□□□ 0.91
PCCB-215ENST00000482086 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
PCCB-215ENST00000482086 NEXMIFQ5QGS0 1516 aa20.75■□□□□ 0.91
PCCB-215ENST00000482086 ZFYVE9O95405 1425 aa20.75■□□□□ 0.91
PCCB-215ENST00000482086 RALGAPBQ86X10 1494 aa20.74■□□□□ 0.91
PCCB-215ENST00000482086 KIAA1210Q9ULL0 1709 aa20.73■□□□□ 0.91
PCCB-215ENST00000482086 TRPM1Q7Z4N2 1603 aa20.73■□□□□ 0.91
PCCB-215ENST00000482086 NRXN1Q9ULB1 1477 aa20.73■□□□□ 0.91
PCCB-215ENST00000482086 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.72■□□□□ 0.91
PCCB-215ENST00000482086 ZNF142P52746 1687 aaPredicted RBP20.7■□□□□ 0.91
PCCB-215ENST00000482086 THEMISQ8N1K5 641 aaPredicted RBP20.7■□□□□ 0.9
PCCB-215ENST00000482086 RIMS2Q9UQ26 1411 aa20.69■□□□□ 0.9
PCCB-215ENST00000482086 CEP170BQ9Y4F5 1589 aaPredicted RBP20.69■□□□□ 0.9
PCCB-215ENST00000482086 ADGRF5Q8IZF2 1346 aa20.68■□□□□ 0.9
PCCB-215ENST00000482086 LAMC1P11047 1609 aa20.67■□□□□ 0.9
PCCB-215ENST00000482086 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
PCCB-215ENST00000482086 TMEM2Q9UHN6 1383 aa20.67■□□□□ 0.9
PCCB-215ENST00000482086 PIK3C2GO75747 1445 aa20.66■□□□□ 0.9
PCCB-215ENST00000482086 KDM4FA0A1W2PPD8 638 aa20.65■□□□□ 0.9
PCCB-215ENST00000482086 GPRASP1Q5JY77 1395 aa20.65■□□□□ 0.9
PCCB-215ENST00000482086 SLIT1O75093 1534 aa20.65■□□□□ 0.9
PCCB-215ENST00000482086 EIF4G2P78344 907 aaKnown RBP eCLIP20.64■□□□□ 0.89
PCCB-215ENST00000482086 CARD11Q9BXL7 1154 aa20.64■□□□□ 0.89
PCCB-215ENST00000482086 EID1Q9Y6B2 187 aa20.63■□□□□ 0.89
PCCB-215ENST00000482086 ARHGAP23Q9P227 1491 aa20.63■□□□□ 0.89
PCCB-215ENST00000482086 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
PCCB-215ENST00000482086 C14orf93Q9H972 538 aaKnown RBP20.61■□□□□ 0.89
PCCB-215ENST00000482086 SETBP1Q9Y6X0 1596 aa20.61■□□□□ 0.89
PCCB-215ENST00000482086 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
PCCB-215ENST00000482086 NBPF1Q3BBV0 1214 aa20.59■□□□□ 0.89
PCCB-215ENST00000482086 CFAP70Q5T0N1 1121 aa20.59■□□□□ 0.89
PCCB-215ENST00000482086 USP47Q96K76 1375 aa20.58■□□□□ 0.88
PCCB-215ENST00000482086 TXNDC2Q86VQ3 553 aa20.57■□□□□ 0.88
PCCB-215ENST00000482086 HSPA5P11021 654 aaKnown RBP20.56■□□□□ 0.88
PCCB-215ENST00000482086 PLEKHG1Q9ULL1 1385 aa20.56■□□□□ 0.88
PCCB-215ENST00000482086 SCAF11Q99590 1463 aaKnown RBP20.55■□□□□ 0.88
PCCB-215ENST00000482086 ALKQ9UM73 1620 aa20.54■□□□□ 0.88
PCCB-215ENST00000482086 IQGAP1P46940 1657 aa20.54■□□□□ 0.88
PCCB-215ENST00000482086 EIF3AQ14152 1382 aaKnown RBP20.53■□□□□ 0.88
PCCB-215ENST00000482086 ANKLE2Q86XL3 938 aa20.53■□□□□ 0.88
PCCB-215ENST00000482086 LTKP29376 864 aa20.53■□□□□ 0.88
PCCB-215ENST00000482086 ADGRB1O14514 1584 aa20.51■□□□□ 0.87
PCCB-215ENST00000482086 BCANQ96GW7 911 aa20.51■□□□□ 0.87
PCCB-215ENST00000482086 NRXN3Q9Y4C0 1643 aa20.51■□□□□ 0.87
PCCB-215ENST00000482086 SLC24A1O60721 1099 aa20.49■□□□□ 0.87
PCCB-215ENST00000482086 SETD1AO15047 1707 aaKnown RBP20.49■□□□□ 0.87
PCCB-215ENST00000482086 DIP2AQ14689 1571 aa20.48■□□□□ 0.87
PCCB-215ENST00000482086 POLR1AO95602 1720 aaPredicted RBP20.48■□□□□ 0.87
PCCB-215ENST00000482086 ST20-MTHFSA0A0A6YYL1 179 aa20.46■□□□□ 0.87
PCCB-215ENST00000482086 TMEM132EQ6IEE7 984 aa20.45■□□□□ 0.86
PCCB-215ENST00000482086 ADAMTS13Q76LX8 1427 aa20.45■□□□□ 0.86
PCCB-215ENST00000482086 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
PCCB-215ENST00000482086 TBX22Q9Y458 520 aa20.44■□□□□ 0.86
PCCB-215ENST00000482086 MED14O60244 1454 aa20.44■□□□□ 0.86
PCCB-215ENST00000482086 YTHDC2Q9H6S0 1430 aaKnown RBP20.44■□□□□ 0.86
PCCB-215ENST00000482086 ASXL1Q8IXJ9 1541 aa20.44■□□□□ 0.86
PCCB-215ENST00000482086 LRPPRCP42704 1394 aaKnown RBP20.42■□□□□ 0.86
PCCB-215ENST00000482086 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
PCCB-215ENST00000482086 TRAK1Q9UPV9 953 aa20.41■□□□□ 0.86
PCCB-215ENST00000482086 ARHGEF28Q8N1W1 1705 aaKnown RBP20.41■□□□□ 0.86
PCCB-215ENST00000482086 LMTK3Q96Q04 1460 aa20.4■□□□□ 0.86
PCCB-215ENST00000482086 KNDC1Q76NI1 1749 aa20.4■□□□□ 0.86
PCCB-215ENST00000482086 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
PCCB-215ENST00000482086 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
PCCB-215ENST00000482086 PIK3R4Q99570 1358 aa20.39■□□□□ 0.86
PCCB-215ENST00000482086 NPHP4O75161 1426 aaPredicted RBP20.39■□□□□ 0.85
PCCB-215ENST00000482086 CENPJQ9HC77 1338 aaPredicted RBP20.39■□□□□ 0.85
PCCB-215ENST00000482086 METP08581 1390 aa20.38■□□□□ 0.85
PCCB-215ENST00000482086 SBNO2Q9Y2G9 1366 aa20.38■□□□□ 0.85
PCCB-215ENST00000482086 SIRT1Q96EB6 747 aa20.37■□□□□ 0.85
PCCB-215ENST00000482086 STK26Q9P289 416 aa20.37■□□□□ 0.85
PCCB-215ENST00000482086 TMF1P82094 1093 aa20.36■□□□□ 0.85
PCCB-215ENST00000482086 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
PCCB-215ENST00000482086 TESK2Q96S53 571 aa20.36■□□□□ 0.85
PCCB-215ENST00000482086 TECPR2O15040 1411 aa20.36■□□□□ 0.85
PCCB-215ENST00000482086 QRICH2Q9H0J4 1663 aa20.36■□□□□ 0.85
PCCB-215ENST00000482086 CDCA8Q53HL2 280 aa20.36■□□□□ 0.85
PCCB-215ENST00000482086 NCKAP5LQ9HCH0 1330 aa20.34■□□□□ 0.85
PCCB-215ENST00000482086 POGKQ9P215 609 aa20.34■□□□□ 0.85
PCCB-215ENST00000482086 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
PCCB-215ENST00000482086 FAM135BQ49AJ0 1406 aa20.33■□□□□ 0.85
PCCB-215ENST00000482086 CPS1P31327 1500 aa20.32■□□□□ 0.84
PCCB-215ENST00000482086 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
PCCB-215ENST00000482086 WASHC2AQ641Q2 1341 aa20.31■□□□□ 0.84
PCCB-215ENST00000482086 KIF7Q2M1P5 1343 aa20.3■□□□□ 0.84
PCCB-215ENST00000482086 HSPA2P54652 639 aa20.3■□□□□ 0.84
PCCB-215ENST00000482086 PRAM1Q96QH2 718 aa20.3■□□□□ 0.84
PCCB-215ENST00000482086 C11orf95C9JLR9 678 aaPredicted RBP20.29■□□□□ 0.84
PCCB-215ENST00000482086 AMOTL2Q9Y2J4 779 aa20.29■□□□□ 0.84
PCCB-215ENST00000482086 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
PCCB-215ENST00000482086 PTCH1Q13635 1447 aa20.28■□□□□ 0.84
PCCB-215ENST00000482086 PTPRUQ92729 1446 aa20.28■□□□□ 0.84
PCCB-215ENST00000482086 STRCQ7RTU9 1775 aa20.28■□□□□ 0.84
PCCB-215ENST00000482086 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.83
PCCB-215ENST00000482086 EVC2Q86UK5 1308 aa20.26■□□□□ 0.83
PCCB-215ENST00000482086 PUS7Q96PZ0 661 aaKnown RBP20.26■□□□□ 0.83
PCCB-215ENST00000482086 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
PCCB-215ENST00000482086 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms