RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 UNC13BO14795 1591 aa17.84■□□□□ 0.45
GARNL3-217ENST00000481875 ZFYVE9O95405 1425 aa17.83■□□□□ 0.45
GARNL3-217ENST00000481875 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
GARNL3-217ENST00000481875 NWD1Q149M9 1564 aa17.83■□□□□ 0.44
GARNL3-217ENST00000481875 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
GARNL3-217ENST00000481875 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
GARNL3-217ENST00000481875 TMEM131LA2VDJ0 1609 aa17.81■□□□□ 0.44
GARNL3-217ENST00000481875 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
GARNL3-217ENST00000481875 MYO5BQ9ULV0 1848 aa17.81■□□□□ 0.44
GARNL3-217ENST00000481875 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
GARNL3-217ENST00000481875 CHD2O14647 1828 aaKnown RBP17.8■□□□□ 0.44
GARNL3-217ENST00000481875 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
GARNL3-217ENST00000481875 SLC26A8Q96RN1 970 aa17.78■□□□□ 0.44
GARNL3-217ENST00000481875 IQGAP3Q86VI3 1631 aa17.78■□□□□ 0.44
GARNL3-217ENST00000481875 E9PCH4 1651 aa17.77■□□□□ 0.43
GARNL3-217ENST00000481875 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
GARNL3-217ENST00000481875 TBX22Q9Y458 520 aa17.76■□□□□ 0.43
GARNL3-217ENST00000481875 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
GARNL3-217ENST00000481875 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
GARNL3-217ENST00000481875 RIMS2Q9UQ26 1411 aa17.74■□□□□ 0.43
GARNL3-217ENST00000481875 ROBO1Q9Y6N7 1651 aa17.72■□□□□ 0.43
GARNL3-217ENST00000481875 PIK3R4Q99570 1358 aa17.72■□□□□ 0.43
GARNL3-217ENST00000481875 DIP2AQ14689 1571 aa17.71■□□□□ 0.43
GARNL3-217ENST00000481875 MSH6P52701 1360 aa17.7■□□□□ 0.42
GARNL3-217ENST00000481875 SLAIN2Q9P270 581 aa17.69■□□□□ 0.42
GARNL3-217ENST00000481875 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
GARNL3-217ENST00000481875 NUP155O75694 1391 aa17.68■□□□□ 0.42
GARNL3-217ENST00000481875 RGS17Q9UGC6 210 aaPredicted RBP17.68■□□□□ 0.42
GARNL3-217ENST00000481875 PPP1R15AO75807 674 aaPredicted RBP17.67■□□□□ 0.42
GARNL3-217ENST00000481875 BCANQ96GW7 911 aa17.66■□□□□ 0.42
GARNL3-217ENST00000481875 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
GARNL3-217ENST00000481875 RBM33Q96EV2 1170 aaKnown RBP17.64■□□□□ 0.41
GARNL3-217ENST00000481875 SPHKAPQ2M3C7 1700 aa17.63■□□□□ 0.41
GARNL3-217ENST00000481875 C19orf44Q9H6X5 657 aa17.62■□□□□ 0.41
GARNL3-217ENST00000481875 TRPM2O94759 1503 aa17.62■□□□□ 0.41
GARNL3-217ENST00000481875 PHLPP1O60346 1717 aa17.61■□□□□ 0.41
GARNL3-217ENST00000481875 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.61■□□□□ 0.41
GARNL3-217ENST00000481875 MSH5O43196 834 aa17.6■□□□□ 0.41
GARNL3-217ENST00000481875 CHGAP10645 457 aaKnown RBP17.6■□□□□ 0.41
GARNL3-217ENST00000481875 CADPS2Q86UW7 1296 aa17.6■□□□□ 0.41
GARNL3-217ENST00000481875 SETBP1Q9Y6X0 1596 aa17.6■□□□□ 0.41
GARNL3-217ENST00000481875 RRBP1Q9P2E9 1410 aaKnown RBP17.59■□□□□ 0.41
GARNL3-217ENST00000481875 JCADQ9P266 1359 aa17.59■□□□□ 0.41
GARNL3-217ENST00000481875 COL16A1Q07092 1604 aaPredicted RBP17.58■□□□□ 0.41
GARNL3-217ENST00000481875 NRXN3Q9Y4C0 1643 aa17.58■□□□□ 0.41
GARNL3-217ENST00000481875 DCCP43146 1447 aa17.58■□□□□ 0.41
GARNL3-217ENST00000481875 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
GARNL3-217ENST00000481875 AHDC1Q5TGY3 1603 aaPredicted RBP17.57■□□□□ 0.4
GARNL3-217ENST00000481875 PTPRUQ92729 1446 aa17.56■□□□□ 0.4
GARNL3-217ENST00000481875 AMOTL2Q9Y2J4 779 aa17.56■□□□□ 0.4
GARNL3-217ENST00000481875 NUTM2DQ5VT03 806 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-217ENST00000481875 ATF3P18847 181 aa17.54■□□□□ 0.4
GARNL3-217ENST00000481875 ITGAEP38570 1179 aa17.54■□□□□ 0.4
GARNL3-217ENST00000481875 POTEAQ6S8J7 498 aa17.54■□□□□ 0.4
GARNL3-217ENST00000481875 NAIPQ13075 1403 aa17.54■□□□□ 0.4
GARNL3-217ENST00000481875 SPATA31A6Q5VVP1 1343 aa17.53■□□□□ 0.4
GARNL3-217ENST00000481875 KIF1BO60333 1816 aa17.52■□□□□ 0.4
GARNL3-217ENST00000481875 SHPRHQ149N8 1683 aa17.52■□□□□ 0.39
GARNL3-217ENST00000481875 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
GARNL3-217ENST00000481875 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
GARNL3-217ENST00000481875 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
GARNL3-217ENST00000481875 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
GARNL3-217ENST00000481875 BRINP3Q76B58 766 aa17.48■□□□□ 0.39
GARNL3-217ENST00000481875 METP08581 1390 aa17.48■□□□□ 0.39
GARNL3-217ENST00000481875 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
GARNL3-217ENST00000481875 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
GARNL3-217ENST00000481875 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
GARNL3-217ENST00000481875 MST1RQ04912 1400 aa17.46■□□□□ 0.39
GARNL3-217ENST00000481875 SETD5Q9C0A6 1442 aa17.46■□□□□ 0.39
GARNL3-217ENST00000481875 LRP6O75581 1613 aa17.45■□□□□ 0.38
GARNL3-217ENST00000481875 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
GARNL3-217ENST00000481875 ADGRL3Q9HAR2 1447 aa17.45■□□□□ 0.38
GARNL3-217ENST00000481875 RPGRIP1LQ68CZ1 1315 aa17.45■□□□□ 0.38
GARNL3-217ENST00000481875 ASXL1Q8IXJ9 1541 aa17.44■□□□□ 0.38
GARNL3-217ENST00000481875 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
GARNL3-217ENST00000481875 SETD1AO15047 1707 aaKnown RBP17.44■□□□□ 0.38
GARNL3-217ENST00000481875 ZNF772Q68DY9 489 aaPredicted RBP17.43■□□□□ 0.38
GARNL3-217ENST00000481875 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
GARNL3-217ENST00000481875 LAMC1P11047 1609 aa17.42■□□□□ 0.38
GARNL3-217ENST00000481875 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
GARNL3-217ENST00000481875 LRRC59Q96AG4 307 aaKnown RBP17.4■□□□□ 0.38
GARNL3-217ENST00000481875 PPLO60437 1756 aa17.39■□□□□ 0.37
GARNL3-217ENST00000481875 SLC4A1APQ9BWU0 796 aaKnown RBP17.37■□□□□ 0.37
GARNL3-217ENST00000481875 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
GARNL3-217ENST00000481875 MEX3CQ5U5Q3 659 aaKnown RBP17.35■□□□□ 0.37
GARNL3-217ENST00000481875 TRIM52Q96A61 297 aa17.35■□□□□ 0.37
GARNL3-217ENST00000481875 C1orf167Q5SNV9 1468 aa17.35■□□□□ 0.37
GARNL3-217ENST00000481875 ROBO2Q9HCK4 1378 aa17.34■□□□□ 0.37
GARNL3-217ENST00000481875 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
GARNL3-217ENST00000481875 PNPLA6Q8IY17 1366 aa17.32■□□□□ 0.36
GARNL3-217ENST00000481875 SOS2Q07890 1332 aaPredicted RBP17.32■□□□□ 0.36
GARNL3-217ENST00000481875 RXRBP28702 533 aa17.3■□□□□ 0.36
GARNL3-217ENST00000481875 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
GARNL3-217ENST00000481875 IFT172Q9UG01 1749 aa17.29■□□□□ 0.36
GARNL3-217ENST00000481875 TECPR2O15040 1411 aa17.29■□□□□ 0.36
GARNL3-217ENST00000481875 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
GARNL3-217ENST00000481875 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
GARNL3-217ENST00000481875 AFF2P51816 1311 aa17.27■□□□□ 0.36
GARNL3-217ENST00000481875 NUTM2BA6NNL0 878 aaPredicted RBP17.27■□□□□ 0.36
GARNL3-217ENST00000481875 NUTM2EB1AL46 878 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms