RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 TOM1O60784 492 aa15.93■□□□□ 0.14
SSBP1-210ENST00000481508 XIRP1Q702N8 1843 aaKnown RBP15.93■□□□□ 0.14
SSBP1-210ENST00000481508 MYO5BQ9ULV0 1848 aa15.92■□□□□ 0.14
SSBP1-210ENST00000481508 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
SSBP1-210ENST00000481508 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
SSBP1-210ENST00000481508 NLRP1Q9C000 1473 aa15.91■□□□□ 0.14
SSBP1-210ENST00000481508 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
SSBP1-210ENST00000481508 SETD5Q9C0A6 1442 aa15.9■□□□□ 0.14
SSBP1-210ENST00000481508 IQGAP1P46940 1657 aa15.89■□□□□ 0.13
SSBP1-210ENST00000481508 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
SSBP1-210ENST00000481508 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
SSBP1-210ENST00000481508 ADGRB3O60242 1522 aa15.84■□□□□ 0.13
SSBP1-210ENST00000481508 CLTCL1P53675 1640 aa15.84■□□□□ 0.13
SSBP1-210ENST00000481508 KDM5AP29375 1690 aaKnown RBP15.84■□□□□ 0.13
SSBP1-210ENST00000481508 IDI1Q13907 227 aa15.84■□□□□ 0.13
SSBP1-210ENST00000481508 TMEM131LA2VDJ0 1609 aa15.83■□□□□ 0.13
SSBP1-210ENST00000481508 POTEAQ6S8J7 498 aa15.83■□□□□ 0.12
SSBP1-210ENST00000481508 SRCAPQ6ZRS2 3230 aa15.83■□□□□ 0.12
SSBP1-210ENST00000481508 TRPM2O94759 1503 aa15.82■□□□□ 0.12
SSBP1-210ENST00000481508 LRRC7Q96NW7 1537 aa15.82■□□□□ 0.12
SSBP1-210ENST00000481508 ARHGAP23Q9P227 1491 aa15.8■□□□□ 0.12
SSBP1-210ENST00000481508 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
SSBP1-210ENST00000481508 SLIT1O75093 1534 aa15.79■□□□□ 0.12
SSBP1-210ENST00000481508 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
SSBP1-210ENST00000481508 MPHOSPH9Q99550 1183 aa15.78■□□□□ 0.12
SSBP1-210ENST00000481508 KIF1BO60333 1816 aa15.77■□□□□ 0.11
SSBP1-210ENST00000481508 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
SSBP1-210ENST00000481508 SLC52A1Q9NWF4 448 aa15.76■□□□□ 0.11
SSBP1-210ENST00000481508 NPHP4O75161 1426 aaPredicted RBP15.76■□□□□ 0.11
SSBP1-210ENST00000481508 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
SSBP1-210ENST00000481508 ROBO1Q9Y6N7 1651 aa15.74■□□□□ 0.11
SSBP1-210ENST00000481508 LTKP29376 864 aa15.74■□□□□ 0.11
SSBP1-210ENST00000481508 MED14O60244 1454 aa15.73■□□□□ 0.11
SSBP1-210ENST00000481508 SCAF11Q99590 1463 aaKnown RBP15.73■□□□□ 0.11
SSBP1-210ENST00000481508 ZFYVE9O95405 1425 aa15.73■□□□□ 0.11
SSBP1-210ENST00000481508 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
SSBP1-210ENST00000481508 CHGAP10645 457 aaKnown RBP15.71■□□□□ 0.11
SSBP1-210ENST00000481508 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
SSBP1-210ENST00000481508 ANKLE2Q86XL3 938 aa15.71■□□□□ 0.11
SSBP1-210ENST00000481508 RIMS2Q9UQ26 1411 aa15.7■□□□□ 0.1
SSBP1-210ENST00000481508 HRCP23327 699 aa15.7■□□□□ 0.1
SSBP1-210ENST00000481508 NEXMIFQ5QGS0 1516 aa15.69■□□□□ 0.1
SSBP1-210ENST00000481508 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
SSBP1-210ENST00000481508 PHLPP1O60346 1717 aa15.68■□□□□ 0.1
SSBP1-210ENST00000481508 PPLO60437 1756 aa15.67■□□□□ 0.1
SSBP1-210ENST00000481508 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
SSBP1-210ENST00000481508 NUTM2DQ5VT03 806 aaPredicted RBP15.67■□□□□ 0.1
SSBP1-210ENST00000481508 IFT172Q9UG01 1749 aa15.67■□□□□ 0.1
SSBP1-210ENST00000481508 NRXN3Q9Y4C0 1643 aa15.66■□□□□ 0.1
SSBP1-210ENST00000481508 CCDC144AA2RUR9 1427 aa15.65■□□□□ 0.1
SSBP1-210ENST00000481508 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
SSBP1-210ENST00000481508 ANKRD30BQ9BXX2 1392 aa15.64■□□□□ 0.09
SSBP1-210ENST00000481508 SPATA31E1Q6ZUB1 1445 aa15.64■□□□□ 0.09
SSBP1-210ENST00000481508 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
SSBP1-210ENST00000481508 PLEKHG1Q9ULL1 1385 aa15.62■□□□□ 0.09
SSBP1-210ENST00000481508 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
SSBP1-210ENST00000481508 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
SSBP1-210ENST00000481508 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
SSBP1-210ENST00000481508 SLC26A8Q96RN1 970 aa15.59■□□□□ 0.09
SSBP1-210ENST00000481508 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
SSBP1-210ENST00000481508 SETBP1Q9Y6X0 1596 aa15.58■□□□□ 0.09
SSBP1-210ENST00000481508 LRP6O75581 1613 aa15.58■□□□□ 0.09
SSBP1-210ENST00000481508 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
SSBP1-210ENST00000481508 DHX57Q6P158 1386 aaKnown RBP15.58■□□□□ 0.08
SSBP1-210ENST00000481508 NWD1Q149M9 1564 aa15.57■□□□□ 0.08
SSBP1-210ENST00000481508 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
SSBP1-210ENST00000481508 FAM135BQ49AJ0 1406 aa15.56■□□□□ 0.08
SSBP1-210ENST00000481508 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
SSBP1-210ENST00000481508 COL16A1Q07092 1604 aaPredicted RBP15.56■□□□□ 0.08
SSBP1-210ENST00000481508 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
SSBP1-210ENST00000481508 BCANQ96GW7 911 aa15.54■□□□□ 0.08
SSBP1-210ENST00000481508 PCGF6Q9BYE7 350 aa15.54■□□□□ 0.08
SSBP1-210ENST00000481508 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
SSBP1-210ENST00000481508 PTPRUQ92729 1446 aa15.52■□□□□ 0.08
SSBP1-210ENST00000481508 HDGFP51858 240 aaKnown RBP15.52■□□□□ 0.08
SSBP1-210ENST00000481508 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
SSBP1-210ENST00000481508 RPGRIP1LQ68CZ1 1315 aa15.51■□□□□ 0.07
SSBP1-210ENST00000481508 METP08581 1390 aa15.5■□□□□ 0.07
SSBP1-210ENST00000481508 ASXL1Q8IXJ9 1541 aa15.5■□□□□ 0.07
SSBP1-210ENST00000481508 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
SSBP1-210ENST00000481508 TBX22Q9Y458 520 aa15.5■□□□□ 0.07
SSBP1-210ENST00000481508 SHPRHQ149N8 1683 aa15.49■□□□□ 0.07
SSBP1-210ENST00000481508 MYOM2P54296 1465 aa15.49■□□□□ 0.07
SSBP1-210ENST00000481508 NRXN1Q9ULB1 1477 aa15.49■□□□□ 0.07
SSBP1-210ENST00000481508 RBM33Q96EV2 1170 aaKnown RBP15.49■□□□□ 0.07
SSBP1-210ENST00000481508 KCNA6P17658 529 aa15.48■□□□□ 0.07
SSBP1-210ENST00000481508 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
SSBP1-210ENST00000481508 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
SSBP1-210ENST00000481508 PIK3C2GO75747 1445 aa15.47■□□□□ 0.07
SSBP1-210ENST00000481508 SIN3AQ96ST3 1273 aa15.47■□□□□ 0.07
SSBP1-210ENST00000481508 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.07
SSBP1-210ENST00000481508 CAPN15O75808 1086 aa15.46■□□□□ 0.07
SSBP1-210ENST00000481508 DSG3P32926 999 aa15.44■□□□□ 0.06
SSBP1-210ENST00000481508 PIK3R4Q99570 1358 aa15.44■□□□□ 0.06
SSBP1-210ENST00000481508 JCADQ9P266 1359 aa15.44■□□□□ 0.06
SSBP1-210ENST00000481508 LAMC1P11047 1609 aa15.43■□□□□ 0.06
SSBP1-210ENST00000481508 AMOTL2Q9Y2J4 779 aa15.42■□□□□ 0.06
SSBP1-210ENST00000481508 KDM2AQ9Y2K7 1162 aa15.42■□□□□ 0.06
SSBP1-210ENST00000481508 KNDC1Q76NI1 1749 aa15.42■□□□□ 0.06
SSBP1-210ENST00000481508 EP400Q96L91 3159 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms