RNA–Protein interactions for RNA: ENST00000481320.5

NSMCE4A-209, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 1,345 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-209ENST00000481320 TMEM131LA2VDJ0 1609 aa28.28■■■□□ 2.12
NSMCE4A-209ENST00000481320 LRRC7Q96NW7 1537 aa28.28■■■□□ 2.12
NSMCE4A-209ENST00000481320 STRCP1A6NGW2 1772 aa28.28■■■□□ 2.12
NSMCE4A-209ENST00000481320 RIMS2Q9UQ26 1411 aa28.27■■■□□ 2.12
NSMCE4A-209ENST00000481320 KCNA6P17658 529 aa28.27■■■□□ 2.12
NSMCE4A-209ENST00000481320 MYO5BQ9ULV0 1848 aa28.26■■■□□ 2.11
NSMCE4A-209ENST00000481320 HFM1A2PYH4 1435 aa28.26■■■□□ 2.11
NSMCE4A-209ENST00000481320 ILDR2Q71H61 639 aa28.24■■■□□ 2.11
NSMCE4A-209ENST00000481320 ZFYVE9O95405 1425 aa28.24■■■□□ 2.11
NSMCE4A-209ENST00000481320 PLEKHG1Q9ULL1 1385 aa28.23■■■□□ 2.11
NSMCE4A-209ENST00000481320 PROSER2Q86WR7 435 aaPredicted RBP28.2■■■□□ 2.11
NSMCE4A-209ENST00000481320 TBX22Q9Y458 520 aa28.19■■■□□ 2.1
NSMCE4A-209ENST00000481320 SENP3Q9H4L4 574 aaPredicted RBP28.18■■■□□ 2.1
NSMCE4A-209ENST00000481320 SPHKAPQ2M3C7 1700 aa28.18■■■□□ 2.1
NSMCE4A-209ENST00000481320 SLC4A1APQ9BWU0 796 aaKnown RBP28.18■■■□□ 2.1
NSMCE4A-209ENST00000481320 ZNF326Q5BKZ1 582 aaKnown RBP28.17■■■□□ 2.1
NSMCE4A-209ENST00000481320 NUTM2DQ5VT03 806 aaPredicted RBP28.17■■■□□ 2.1
NSMCE4A-209ENST00000481320 HSPA1LP34931 641 aa28.13■■■□□ 2.09
NSMCE4A-209ENST00000481320 ACIN1Q9UKV3 1341 aaKnown RBP28.12■■■□□ 2.09
NSMCE4A-209ENST00000481320 TMEM94Q12767 1356 aa28.11■■■□□ 2.09
NSMCE4A-209ENST00000481320 SOCS7O14512 581 aa28.09■■■□□ 2.09
NSMCE4A-209ENST00000481320 NKTRP30414 1462 aaKnown RBP28.07■■■□□ 2.08
NSMCE4A-209ENST00000481320 CHD2O14647 1828 aaKnown RBP28.07■■■□□ 2.08
NSMCE4A-209ENST00000481320 XIRP1Q702N8 1843 aaKnown RBP28.07■■■□□ 2.08
NSMCE4A-209ENST00000481320 TRPM2O94759 1503 aa28.05■■■□□ 2.08
NSMCE4A-209ENST00000481320 PIK3R4Q99570 1358 aa28.05■■■□□ 2.08
NSMCE4A-209ENST00000481320 ALKQ9UM73 1620 aa28.04■■■□□ 2.08
NSMCE4A-209ENST00000481320 RBM33Q96EV2 1170 aaKnown RBP28.04■■■□□ 2.08
NSMCE4A-209ENST00000481320 NWD1Q149M9 1564 aa28.04■■■□□ 2.08
NSMCE4A-209ENST00000481320 KIF1BO60333 1816 aa28.03■■■□□ 2.08
NSMCE4A-209ENST00000481320 DIP2AQ14689 1571 aa28.03■■■□□ 2.08
NSMCE4A-209ENST00000481320 ADAMTS13Q76LX8 1427 aa28.02■■■□□ 2.08
NSMCE4A-209ENST00000481320 MSH6P52701 1360 aa28.01■■■□□ 2.07
NSMCE4A-209ENST00000481320 CLTCL1P53675 1640 aa28■■■□□ 2.07
NSMCE4A-209ENST00000481320 MPHOSPH9Q99550 1183 aa28■■■□□ 2.07
NSMCE4A-209ENST00000481320 VGFO15240 615 aaPredicted RBP27.99■■■□□ 2.07
NSMCE4A-209ENST00000481320 AMOTL2Q9Y2J4 779 aa27.98■■■□□ 2.07
NSMCE4A-209ENST00000481320 NCOA3Q9Y6Q9 1424 aa27.98■■■□□ 2.07
NSMCE4A-209ENST00000481320 RPGRIP1LQ68CZ1 1315 aa27.97■■■□□ 2.07
NSMCE4A-209ENST00000481320 C14orf37Q86TY3 774 aa27.97■■■□□ 2.07
NSMCE4A-209ENST00000481320 FAM135BQ49AJ0 1406 aa27.96■■■□□ 2.07
NSMCE4A-209ENST00000481320 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
NSMCE4A-209ENST00000481320 FOXD1Q16676 465 aa27.94■■■□□ 2.06
NSMCE4A-209ENST00000481320 SLAIN2Q9P270 581 aa27.93■■■□□ 2.06
NSMCE4A-209ENST00000481320 C19orf44Q9H6X5 657 aa27.92■■■□□ 2.06
NSMCE4A-209ENST00000481320 SETBP1Q9Y6X0 1596 aa27.91■■■□□ 2.06
NSMCE4A-209ENST00000481320 NEXMIFQ5QGS0 1516 aa27.9■■■□□ 2.06
NSMCE4A-209ENST00000481320 CCDC144AA2RUR9 1427 aa27.88■■■□□ 2.05
NSMCE4A-209ENST00000481320 ATF3P18847 181 aa27.88■■■□□ 2.05
NSMCE4A-209ENST00000481320 CADPS2Q86UW7 1296 aa27.88■■■□□ 2.05
NSMCE4A-209ENST00000481320 PTPRUQ92729 1446 aa27.86■■■□□ 2.05
NSMCE4A-209ENST00000481320 NRXN3Q9Y4C0 1643 aa27.85■■■□□ 2.05
NSMCE4A-209ENST00000481320 METP08581 1390 aa27.84■■■□□ 2.05
NSMCE4A-209ENST00000481320 RGL3Q3MIN7 710 aa27.83■■■□□ 2.05
NSMCE4A-209ENST00000481320 MED1Q15648 1581 aaPredicted RBP27.81■■■□□ 2.04
NSMCE4A-209ENST00000481320 RAB3GAP2Q9H2M9 1393 aa27.8■■■□□ 2.04
NSMCE4A-209ENST00000481320 ROBO1Q9Y6N7 1651 aa27.8■■■□□ 2.04
NSMCE4A-209ENST00000481320 HRCP23327 699 aa27.77■■■□□ 2.04
NSMCE4A-209ENST00000481320 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.77■■■□□ 2.04
NSMCE4A-209ENST00000481320 PHF23Q9BUL5 403 aaPredicted RBP27.76■■■□□ 2.03
NSMCE4A-209ENST00000481320 XRN1Q8IZH2 1706 aaKnown RBP27.75■■■□□ 2.03
NSMCE4A-209ENST00000481320 PPLO60437 1756 aa27.75■■■□□ 2.03
NSMCE4A-209ENST00000481320 ANKRD30BQ9BXX2 1392 aa27.74■■■□□ 2.03
NSMCE4A-209ENST00000481320 DCCP43146 1447 aa27.71■■■□□ 2.03
NSMCE4A-209ENST00000481320 SPATA31E1Q6ZUB1 1445 aa27.71■■■□□ 2.03
NSMCE4A-209ENST00000481320 ADGRF5Q8IZF2 1346 aa27.7■■■□□ 2.02
NSMCE4A-209ENST00000481320 PHLPP1O60346 1717 aa27.66■■■□□ 2.02
NSMCE4A-209ENST00000481320 ADGRL3Q9HAR2 1447 aa27.64■■■□□ 2.01
NSMCE4A-209ENST00000481320 SETD1AO15047 1707 aaKnown RBP27.63■■■□□ 2.01
NSMCE4A-209ENST00000481320 PTCH1Q13635 1447 aa27.63■■■□□ 2.01
NSMCE4A-209ENST00000481320 BRINP3Q76B58 766 aa27.63■■■□□ 2.01
NSMCE4A-209ENST00000481320 JCADQ9P266 1359 aa27.62■■■□□ 2.01
NSMCE4A-209ENST00000481320 ROBO2Q9HCK4 1378 aa27.61■■■□□ 2.01
NSMCE4A-209ENST00000481320 IFT172Q9UG01 1749 aa27.59■■■□□ 2.01
NSMCE4A-209ENST00000481320 PRAG1Q86YV5 1406 aa27.59■■■□□ 2.01
NSMCE4A-209ENST00000481320 STK26Q9P289 416 aa27.58■■■□□ 2.01
NSMCE4A-209ENST00000481320 MST1RQ04912 1400 aa27.58■■■□□ 2.01
NSMCE4A-209ENST00000481320 TMEM132EQ6IEE7 984 aa27.55■■■□□ 2
NSMCE4A-209ENST00000481320 C14orf93Q9H972 538 aaKnown RBP27.55■■■□□ 2
NSMCE4A-209ENST00000481320 AHDC1Q5TGY3 1603 aaPredicted RBP27.54■■■□□ 2
NSMCE4A-209ENST00000481320 PIK3C2GO75747 1445 aa27.54■■■□□ 2
NSMCE4A-209ENST00000481320 NALCNQ8IZF0 1738 aa27.53■■■□□ 2
NSMCE4A-209ENST00000481320 STAC3Q96MF2 364 aa27.53■■■□□ 2
NSMCE4A-209ENST00000481320 LRPPRCP42704 1394 aaKnown RBP27.53■■■□□ 2
NSMCE4A-209ENST00000481320 ABCC11Q96J66 1382 aa27.53■■■□□ 2
NSMCE4A-209ENST00000481320 COL16A1Q07092 1604 aaPredicted RBP27.52■■■□□ 2
NSMCE4A-209ENST00000481320 SPATA31A6Q5VVP1 1343 aa27.52■■■□□ 2
NSMCE4A-209ENST00000481320 LRRC59Q96AG4 307 aaKnown RBP27.51■■□□□ 1.99
NSMCE4A-209ENST00000481320 ASXL1Q8IXJ9 1541 aa27.5■■□□□ 1.99
NSMCE4A-209ENST00000481320 CFAP70Q5T0N1 1121 aa27.49■■□□□ 1.99
NSMCE4A-209ENST00000481320 WAPLQ7Z5K2 1190 aa27.49■■□□□ 1.99
NSMCE4A-209ENST00000481320 SIRT1Q96EB6 747 aa27.49■■□□□ 1.99
NSMCE4A-209ENST00000481320 DHX57Q6P158 1386 aaKnown RBP27.49■■□□□ 1.99
NSMCE4A-209ENST00000481320 C1orf167Q5SNV9 1468 aa27.48■■□□□ 1.99
NSMCE4A-209ENST00000481320 MYOM2P54296 1465 aa27.47■■□□□ 1.99
NSMCE4A-209ENST00000481320 TECPR2O15040 1411 aa27.47■■□□□ 1.99
NSMCE4A-209ENST00000481320 DCAF11Q8TEB1 546 aa27.47■■□□□ 1.99
NSMCE4A-209ENST00000481320 RGS17Q9UGC6 210 aaPredicted RBP27.47■■□□□ 1.99
NSMCE4A-209ENST00000481320 KDM2AQ9Y2K7 1162 aa27.46■■□□□ 1.99
NSMCE4A-209ENST00000481320 NRXN1Q9ULB1 1477 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms