RNA–Protein interactions for RNA: ENST00000481273.5

PTK7-213, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTK7, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-213ENST00000481273 FAM43AQ8N2R8 423 aa13.91□□□□□ -0.18
PTK7-213ENST00000481273 L1TD1Q5T7N2 865 aaKnown RBP13.9□□□□□ -0.18
PTK7-213ENST00000481273 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.18
PTK7-213ENST00000481273 U2AF1L5P0DN76 240 aaPredicted RBP13.9□□□□□ -0.18
PTK7-213ENST00000481273 U2AF1Q01081 240 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTK7-213ENST00000481273 CDCA8Q53HL2 280 aa13.9□□□□□ -0.18
PTK7-213ENST00000481273 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
PTK7-213ENST00000481273 ITPRIPQ8IWB1 547 aa13.9□□□□□ -0.18
PTK7-213ENST00000481273 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
PTK7-213ENST00000481273 TRAK1Q9UPV9 953 aa13.9□□□□□ -0.18
PTK7-213ENST00000481273 RLBP1P12271 317 aa13.89□□□□□ -0.19
PTK7-213ENST00000481273 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
PTK7-213ENST00000481273 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
PTK7-213ENST00000481273 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
PTK7-213ENST00000481273 KIF14Q15058 1648 aa13.89□□□□□ -0.19
PTK7-213ENST00000481273 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
PTK7-213ENST00000481273 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
PTK7-213ENST00000481273 CGNL1Q0VF96 1302 aa13.89□□□□□ -0.19
PTK7-213ENST00000481273 TSR2Q969E8 191 aaKnown RBP13.89□□□□□ -0.19
PTK7-213ENST00000481273 UBE2Q2Q8WVN8 375 aa13.88□□□□□ -0.19
PTK7-213ENST00000481273 TCP11L2Q8N4U5 519 aa13.87□□□□□ -0.19
PTK7-213ENST00000481273 PRAG1Q86YV5 1406 aa13.87□□□□□ -0.19
PTK7-213ENST00000481273 MAPK8IP3Q9UPT6 1336 aa13.87□□□□□ -0.19
PTK7-213ENST00000481273 WWC1Q8IX03 1113 aa13.87□□□□□ -0.19
PTK7-213ENST00000481273 XRCC6P12956 609 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTK7-213ENST00000481273 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
PTK7-213ENST00000481273 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
PTK7-213ENST00000481273 HSCBQ8IWL3 235 aa13.86□□□□□ -0.19
PTK7-213ENST00000481273 UHRF1BP1Q6BDS2 1440 aa13.85□□□□□ -0.19
PTK7-213ENST00000481273 TRAK2O60296 914 aa13.85□□□□□ -0.19
PTK7-213ENST00000481273 SLC12A5Q9H2X9 1139 aa13.85□□□□□ -0.19
PTK7-213ENST00000481273 RWDD1Q9H446 243 aaPredicted RBP13.85□□□□□ -0.19
PTK7-213ENST00000481273 PMFBP1Q8TBY8 1022 aa13.85□□□□□ -0.19
PTK7-213ENST00000481273 C22orf23Q9BZE7 217 aa13.85□□□□□ -0.19
PTK7-213ENST00000481273 MYH16Q9H6N6 1097 aa13.84□□□□□ -0.19
PTK7-213ENST00000481273 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
PTK7-213ENST00000481273 USP19O94966 1318 aa13.84□□□□□ -0.19
PTK7-213ENST00000481273 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.19
PTK7-213ENST00000481273 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.19
PTK7-213ENST00000481273 AFAP1Q8N556 730 aa13.83□□□□□ -0.2
PTK7-213ENST00000481273 MCM4P33991 863 aa13.83□□□□□ -0.2
PTK7-213ENST00000481273 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.2
PTK7-213ENST00000481273 APBB1O00213 710 aa13.82□□□□□ -0.2
PTK7-213ENST00000481273 MTHFSP49914 203 aa13.82□□□□□ -0.2
PTK7-213ENST00000481273 GLIPR1L2Q4G1C9 344 aa13.82□□□□□ -0.2
PTK7-213ENST00000481273 BLMP54132 1417 aaPredicted RBP13.82□□□□□ -0.2
PTK7-213ENST00000481273 KIF3BO15066 747 aa13.81□□□□□ -0.2
PTK7-213ENST00000481273 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
PTK7-213ENST00000481273 EIF4G3O43432 1585 aaKnown RBP13.81□□□□□ -0.2
PTK7-213ENST00000481273 RARSP54136 660 aaKnown RBP13.81□□□□□ -0.2
PTK7-213ENST00000481273 PDE3AQ14432 1141 aa13.8□□□□□ -0.2
PTK7-213ENST00000481273 PLEKHH2Q8IVE3 1493 aa13.8□□□□□ -0.2
PTK7-213ENST00000481273 ZMYM4Q5VZL5 1548 aa13.8□□□□□ -0.2
PTK7-213ENST00000481273 CARD14Q9BXL6 1004 aa13.8□□□□□ -0.2
PTK7-213ENST00000481273 STK26Q9P289 416 aa13.8□□□□□ -0.2
PTK7-213ENST00000481273 MAGI2Q86UL8 1455 aa13.8□□□□□ -0.2
PTK7-213ENST00000481273 PTPRGP23470 1445 aa13.79□□□□□ -0.2
PTK7-213ENST00000481273 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
PTK7-213ENST00000481273 A2MP01023 1474 aa13.79□□□□□ -0.2
PTK7-213ENST00000481273 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
PTK7-213ENST00000481273 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
PTK7-213ENST00000481273 C1orf115Q9H7X2 142 aa13.79□□□□□ -0.2
PTK7-213ENST00000481273 POLR1AO95602 1720 aaPredicted RBP13.79□□□□□ -0.2
PTK7-213ENST00000481273 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
PTK7-213ENST00000481273 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
PTK7-213ENST00000481273 COL17A1Q9UMD9 1497 aaPredicted RBP13.78□□□□□ -0.2
PTK7-213ENST00000481273 CFAP53Q96M91 514 aa13.78□□□□□ -0.2
PTK7-213ENST00000481273 CHMP5Q9NZZ3 219 aa13.78□□□□□ -0.2
PTK7-213ENST00000481273 DZIP1LQ8IYY4 767 aaKnown RBP13.78□□□□□ -0.2
PTK7-213ENST00000481273 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.2
PTK7-213ENST00000481273 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
PTK7-213ENST00000481273 ZNF521Q96K83 1311 aa13.77□□□□□ -0.21
PTK7-213ENST00000481273 FAM135AQ9P2D6 1515 aa13.77□□□□□ -0.21
PTK7-213ENST00000481273 ATP10BO94823 1461 aa13.76□□□□□ -0.21
PTK7-213ENST00000481273 ZKSCAN2Q63HK3 967 aa13.76□□□□□ -0.21
PTK7-213ENST00000481273 RUNDC1Q96C34 613 aa13.76□□□□□ -0.21
PTK7-213ENST00000481273 ANKRD45Q5TZF3 282 aa13.75□□□□□ -0.21
PTK7-213ENST00000481273 ANP32BQ92688 251 aaKnown RBP13.75□□□□□ -0.21
PTK7-213ENST00000481273 PKNOX2Q96KN3 472 aa13.75□□□□□ -0.21
PTK7-213ENST00000481273 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
PTK7-213ENST00000481273 EIF3AQ14152 1382 aaKnown RBP13.75□□□□□ -0.21
PTK7-213ENST00000481273 GRPEL1Q9HAV7 217 aa13.74□□□□□ -0.21
PTK7-213ENST00000481273 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
PTK7-213ENST00000481273 FOXD4L6Q3SYB3 417 aaPredicted RBP13.73□□□□□ -0.21
PTK7-213ENST00000481273 GGT6Q6P531 493 aa13.73□□□□□ -0.21
PTK7-213ENST00000481273 FOXD4L3Q6VB84 417 aaPredicted RBP13.73□□□□□ -0.21
PTK7-213ENST00000481273 ADGRL2O95490 1459 aa13.73□□□□□ -0.21
PTK7-213ENST00000481273 ADGRF5Q8IZF2 1346 aa13.73□□□□□ -0.21
PTK7-213ENST00000481273 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
PTK7-213ENST00000481273 GGNBP2Q9H3C7 697 aa13.73□□□□□ -0.21
PTK7-213ENST00000481273 SPAG9O60271 1321 aaKnown RBP13.72□□□□□ -0.21
PTK7-213ENST00000481273 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
PTK7-213ENST00000481273 ANTXR1Q9H6X2 564 aa13.72□□□□□ -0.21
PTK7-213ENST00000481273 ARHGAP5Q13017 1502 aa13.72□□□□□ -0.21
PTK7-213ENST00000481273 MVPQ14764 893 aaKnown RBP13.72□□□□□ -0.21
PTK7-213ENST00000481273 NOB1Q9ULX3 412 aaKnown RBP13.72□□□□□ -0.21
PTK7-213ENST00000481273 ADGBQ8N7X0 1667 aa13.71□□□□□ -0.21
PTK7-213ENST00000481273 SRPK2P78362 688 aaKnown RBP13.71□□□□□ -0.21
PTK7-213ENST00000481273 ESPNB1AK53 854 aa13.71□□□□□ -0.21
PTK7-213ENST00000481273 FBLN1P23142 703 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms