RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 AMPHP49418 695 aa24.93■■□□□ 1.58
CCM2-214ENST00000481194 NGEFQ8N5V2 710 aa24.93■■□□□ 1.58
CCM2-214ENST00000481194 CSB-PGBD3P0DP91 1061 aa24.89■■□□□ 1.57
CCM2-214ENST00000481194 IRX6P78412 446 aaPredicted RBP24.88■■□□□ 1.57
CCM2-214ENST00000481194 NUTM2FA1L443 756 aa24.88■■□□□ 1.57
CCM2-214ENST00000481194 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
CCM2-214ENST00000481194 RTL5Q5HYW3 569 aaPredicted RBP24.87■■□□□ 1.57
CCM2-214ENST00000481194 GCC2Q8IWJ2 1684 aa24.87■■□□□ 1.57
CCM2-214ENST00000481194 PPP4R2Q9NY27 417 aa24.87■■□□□ 1.57
CCM2-214ENST00000481194 ERICH6BQ5W0A0 696 aa24.86■■□□□ 1.57
CCM2-214ENST00000481194 ATAD2Q6PL18 1390 aa24.86■■□□□ 1.57
CCM2-214ENST00000481194 ATF3P18847 181 aa24.85■■□□□ 1.57
CCM2-214ENST00000481194 CLASP1Q7Z460 1538 aa24.85■■□□□ 1.57
CCM2-214ENST00000481194 PREX2Q70Z35 1606 aa24.85■■□□□ 1.57
CCM2-214ENST00000481194 ATP10AO60312 1499 aa24.84■■□□□ 1.57
CCM2-214ENST00000481194 TNRQ92752 1358 aa24.84■■□□□ 1.57
CCM2-214ENST00000481194 MAST1Q9Y2H9 1570 aa24.84■■□□□ 1.57
CCM2-214ENST00000481194 EIF5BO60841 1220 aaKnown RBP24.84■■□□□ 1.57
CCM2-214ENST00000481194 CABP2Q9NPB3 220 aa24.84■■□□□ 1.57
CCM2-214ENST00000481194 GOLGA2Q08379 1002 aa24.83■■□□□ 1.57
CCM2-214ENST00000481194 BRD4O60885 1362 aaPredicted RBP24.83■■□□□ 1.57
CCM2-214ENST00000481194 ADCY10Q96PN6 1610 aa24.83■■□□□ 1.57
CCM2-214ENST00000481194 SENP3-EIF4A1A0A087X0R7 540 aa24.82■■□□□ 1.56
CCM2-214ENST00000481194 IPO8O15397 1037 aaKnown RBP24.82■■□□□ 1.56
CCM2-214ENST00000481194 PSME1Q06323 249 aa24.81■■□□□ 1.56
CCM2-214ENST00000481194 EIF2AK4Q9P2K8 1649 aaKnown RBP24.81■■□□□ 1.56
CCM2-214ENST00000481194 IDI1Q13907 227 aa24.8■■□□□ 1.56
CCM2-214ENST00000481194 FRAT1Q92837 279 aaPredicted RBP24.8■■□□□ 1.56
CCM2-214ENST00000481194 SCAF11Q99590 1463 aaKnown RBP24.8■■□□□ 1.56
CCM2-214ENST00000481194 ZNF692Q9BU19 519 aaPredicted RBP24.79■■□□□ 1.56
CCM2-214ENST00000481194 NOS1P29475 1434 aa24.78■■□□□ 1.56
CCM2-214ENST00000481194 ARAP3Q8WWN8 1544 aa24.78■■□□□ 1.56
CCM2-214ENST00000481194 ARHGEF12Q9NZN5 1544 aa24.78■■□□□ 1.56
CCM2-214ENST00000481194 GPRASP1Q5JY77 1395 aa24.77■■□□□ 1.56
CCM2-214ENST00000481194 DIAPH1O60610 1272 aaKnown RBP24.77■■□□□ 1.56
CCM2-214ENST00000481194 RCAN3Q9UKA8 241 aa24.76■■□□□ 1.55
CCM2-214ENST00000481194 TTC37Q6PGP7 1564 aa24.76■■□□□ 1.55
CCM2-214ENST00000481194 SAMD9LQ8IVG5 1584 aa24.76■■□□□ 1.55
CCM2-214ENST00000481194 PZPP20742 1482 aa24.75■■□□□ 1.55
CCM2-214ENST00000481194 RALGAPBQ86X10 1494 aa24.75■■□□□ 1.55
CCM2-214ENST00000481194 CDK19Q9BWU1 502 aa24.75■■□□□ 1.55
CCM2-214ENST00000481194 FBXO31Q5XUX0 539 aaPredicted RBP24.75■■□□□ 1.55
CCM2-214ENST00000481194 ZBED9Q6R2W3 1325 aa24.75■■□□□ 1.55
CCM2-214ENST00000481194 ABCC1P33527 1531 aa24.75■■□□□ 1.55
CCM2-214ENST00000481194 ZFYVE16Q7Z3T8 1539 aa24.75■■□□□ 1.55
CCM2-214ENST00000481194 PROSER2Q86WR7 435 aaPredicted RBP24.74■■□□□ 1.55
CCM2-214ENST00000481194 MBD5Q9P267 1494 aa24.73■■□□□ 1.55
CCM2-214ENST00000481194 C14orf93Q9H972 538 aaKnown RBP24.73■■□□□ 1.55
CCM2-214ENST00000481194 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
CCM2-214ENST00000481194 CCDC146Q8IYE0 955 aa24.71■■□□□ 1.55
CCM2-214ENST00000481194 ADGRF5Q8IZF2 1346 aa24.71■■□□□ 1.55
CCM2-214ENST00000481194 MAGI2Q86UL8 1455 aa24.68■■□□□ 1.54
CCM2-214ENST00000481194 E9PSI1 815 aa24.67■■□□□ 1.54
CCM2-214ENST00000481194 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
CCM2-214ENST00000481194 NINLQ9Y2I6 1382 aa24.66■■□□□ 1.54
CCM2-214ENST00000481194 SHROOM2Q13796 1616 aa24.65■■□□□ 1.54
CCM2-214ENST00000481194 RUNDC1Q96C34 613 aa24.65■■□□□ 1.54
CCM2-214ENST00000481194 PRAG1Q86YV5 1406 aa24.65■■□□□ 1.54
CCM2-214ENST00000481194 SLC26A8Q96RN1 970 aa24.64■■□□□ 1.54
CCM2-214ENST00000481194 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.53
CCM2-214ENST00000481194 STK31Q9BXU1 1019 aa24.63■■□□□ 1.53
CCM2-214ENST00000481194 GGNBP2Q9H3C7 697 aa24.63■■□□□ 1.53
CCM2-214ENST00000481194 LTV1Q96GA3 475 aaPredicted RBP24.62■■□□□ 1.53
CCM2-214ENST00000481194 PPP2R1AP30153 589 aa24.61■■□□□ 1.53
CCM2-214ENST00000481194 ARXQ96QS3 562 aa24.61■■□□□ 1.53
CCM2-214ENST00000481194 CASC1Q6TDU7 716 aa24.61■■□□□ 1.53
CCM2-214ENST00000481194 RIMS2Q9UQ26 1411 aa24.6■■□□□ 1.53
CCM2-214ENST00000481194 CABP1Q9NZU7 370 aa24.59■■□□□ 1.53
CCM2-214ENST00000481194 C1orf141Q5JVX7 400 aa24.59■■□□□ 1.53
CCM2-214ENST00000481194 SLC12A5Q9H2X9 1139 aa24.59■■□□□ 1.53
CCM2-214ENST00000481194 ESCO1Q5FWF5 840 aa24.59■■□□□ 1.53
CCM2-214ENST00000481194 HDAC5Q9UQL6 1122 aa24.58■■□□□ 1.53
CCM2-214ENST00000481194 HECW2Q9P2P5 1572 aa24.58■■□□□ 1.53
CCM2-214ENST00000481194 KDM5DQ9BY66 1539 aa24.57■■□□□ 1.52
CCM2-214ENST00000481194 ZMYM3Q14202 1370 aa24.57■■□□□ 1.52
CCM2-214ENST00000481194 CEBPAP49715 358 aaPredicted RBP24.57■■□□□ 1.52
CCM2-214ENST00000481194 NLRP6P59044 892 aa24.57■■□□□ 1.52
CCM2-214ENST00000481194 HSP90AA1P07900 732 aaKnown RBP24.57■■□□□ 1.52
CCM2-214ENST00000481194 CCDC61Q9Y6R9 512 aa24.57■■□□□ 1.52
CCM2-214ENST00000481194 CDC42BPAQ5VT25 1732 aa24.56■■□□□ 1.52
CCM2-214ENST00000481194 SMC4Q9NTJ3 1288 aa24.56■■□□□ 1.52
CCM2-214ENST00000481194 PLXNC1O60486 1568 aa24.54■■□□□ 1.52
CCM2-214ENST00000481194 EVA1CP58658 441 aa24.54■■□□□ 1.52
CCM2-214ENST00000481194 NUDT16Q96DE0 195 aaKnown RBP24.54■■□□□ 1.52
CCM2-214ENST00000481194 UHRF1BP1Q6BDS2 1440 aa24.53■■□□□ 1.52
CCM2-214ENST00000481194 MTHFSP49914 203 aa24.53■■□□□ 1.52
CCM2-214ENST00000481194 ABTB2Q8N961 1025 aa24.53■■□□□ 1.52
CCM2-214ENST00000481194 CCDC9Q9Y3X0 531 aaKnown RBP24.53■■□□□ 1.52
CCM2-214ENST00000481194 SMG6Q86US8 1419 aaKnown RBP24.53■■□□□ 1.52
CCM2-214ENST00000481194 NSD3Q9BZ95 1437 aa24.52■■□□□ 1.52
CCM2-214ENST00000481194 APAF1O14727 1248 aa24.52■■□□□ 1.52
CCM2-214ENST00000481194 NSD2O96028 1365 aa24.52■■□□□ 1.52
CCM2-214ENST00000481194 CFAP44Q96MT7 982 aa24.51■■□□□ 1.51
CCM2-214ENST00000481194 DDRGK1Q96HY6 314 aa24.5■■□□□ 1.51
CCM2-214ENST00000481194 AMOTL2Q9Y2J4 779 aa24.5■■□□□ 1.51
CCM2-214ENST00000481194 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
CCM2-214ENST00000481194 WASLO00401 505 aaPredicted RBP24.49■■□□□ 1.51
CCM2-214ENST00000481194 DMRT2Q9Y5R5 561 aa24.48■■□□□ 1.51
CCM2-214ENST00000481194 PUS7Q96PZ0 661 aaKnown RBP24.48■■□□□ 1.51
CCM2-214ENST00000481194 OS9Q13438 667 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms