RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
COPA-203ENST00000481040 WNT2BQ93097 391 aa9.36□□□□□ -0.91
COPA-203ENST00000481040 RABGEF1Q9UJ41 708 aa9.36□□□□□ -0.91
COPA-203ENST00000481040 MCM6Q14566 821 aa9.34□□□□□ -0.91
COPA-203ENST00000481040 NBPF3Q9H094 633 aa9.34□□□□□ -0.91
COPA-203ENST00000481040 KIAA1468Q9P260 1216 aa9.34□□□□□ -0.91
COPA-203ENST00000481040 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
COPA-203ENST00000481040 PTGDRQ13258 359 aa9.33□□□□□ -0.92
COPA-203ENST00000481040 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
COPA-203ENST00000481040 CCDC9Q9Y3X0 531 aaKnown RBP9.33□□□□□ -0.92
COPA-203ENST00000481040 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
COPA-203ENST00000481040 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
COPA-203ENST00000481040 SEPT9Q9UHD8 586 aaPredicted RBP9.32□□□□□ -0.92
COPA-203ENST00000481040 GOLGA8CPA6NN73 597 aa9.31□□□□□ -0.92
COPA-203ENST00000481040 TRIM6-TRIM34B2RNG4 842 aa9.3□□□□□ -0.92
COPA-203ENST00000481040 BCAMP50895 628 aa9.3□□□□□ -0.92
COPA-203ENST00000481040 FAM198AQ9UFP1 575 aa9.3□□□□□ -0.92
COPA-203ENST00000481040 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
COPA-203ENST00000481040 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
COPA-203ENST00000481040 PROSER2Q86WR7 435 aaPredicted RBP9.29□□□□□ -0.92
COPA-203ENST00000481040 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
COPA-203ENST00000481040 MAP3K7O43318 606 aa9.28□□□□□ -0.92
COPA-203ENST00000481040 TMUB1Q9BVT8 246 aa9.28□□□□□ -0.92
COPA-203ENST00000481040 CDHR5Q9HBB8 845 aa9.28□□□□□ -0.92
COPA-203ENST00000481040 SKIV2LQ15477 1246 aaKnown RBP9.27□□□□□ -0.93
COPA-203ENST00000481040 ZFRQ96KR1 1074 aaKnown RBP9.27□□□□□ -0.93
COPA-203ENST00000481040 CLCN1P35523 988 aa9.26□□□□□ -0.93
COPA-203ENST00000481040 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
COPA-203ENST00000481040 SOWAHBA6NEL2 793 aa9.25□□□□□ -0.93
COPA-203ENST00000481040 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
COPA-203ENST00000481040 ANKK1Q8NFD2 765 aa9.25□□□□□ -0.93
COPA-203ENST00000481040 RAD21O60216 631 aa9.24□□□□□ -0.93
COPA-203ENST00000481040 CCDC97Q96F63 343 aaPredicted RBP9.24□□□□□ -0.93
COPA-203ENST00000481040 POM121Q96HA1 1249 aa9.24□□□□□ -0.93
COPA-203ENST00000481040 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
COPA-203ENST00000481040 SERPINA10Q9UK55 444 aa9.24□□□□□ -0.93
COPA-203ENST00000481040 SMAPO00193 183 aa9.23□□□□□ -0.93
COPA-203ENST00000481040 MDM2Q00987 491 aaPredicted RBP9.23□□□□□ -0.93
COPA-203ENST00000481040 TRAIPQ9BWF2 469 aa9.23□□□□□ -0.93
COPA-203ENST00000481040 SSTR3P32745 418 aaPredicted RBP9.22□□□□□ -0.93
COPA-203ENST00000481040 FAM98CQ17RN3 349 aaKnown RBP9.22□□□□□ -0.93
COPA-203ENST00000481040 PROCA1Q8NCQ7 364 aaPredicted RBP9.22□□□□□ -0.93
COPA-203ENST00000481040 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
COPA-203ENST00000481040 WBP1LQ9NX94 342 aa9.22□□□□□ -0.93
COPA-203ENST00000481040 IFFO2Q5TF58 517 aa9.21□□□□□ -0.94
COPA-203ENST00000481040 ATP1B4Q9UN42 357 aaPredicted RBP9.21□□□□□ -0.94
COPA-203ENST00000481040 PRSS12P56730 875 aa9.2□□□□□ -0.94
COPA-203ENST00000481040 PHOX2BQ99453 314 aa9.2□□□□□ -0.94
COPA-203ENST00000481040 BEGAINQ9BUH8 593 aa9.2□□□□□ -0.94
COPA-203ENST00000481040 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
COPA-203ENST00000481040 KCTD17Q8N5Z5 321 aa9.19□□□□□ -0.94
COPA-203ENST00000481040 SPDYE5A6NIY4 337 aa9.18□□□□□ -0.94
COPA-203ENST00000481040 POLR3EQ9NVU0 708 aa9.18□□□□□ -0.94
COPA-203ENST00000481040 A0A0G2JS52 829 aa9.17□□□□□ -0.94
COPA-203ENST00000481040 COG6Q9Y2V7 657 aa9.17□□□□□ -0.94
COPA-203ENST00000481040 ITGBL1O95965 494 aaPredicted RBP9.16□□□□□ -0.94
COPA-203ENST00000481040 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
COPA-203ENST00000481040 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.16□□□□□ -0.94
COPA-203ENST00000481040 FAM217BQ9NTX9 383 aaPredicted RBP9.16□□□□□ -0.94
COPA-203ENST00000481040 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
COPA-203ENST00000481040 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.15□□□□□ -0.94
COPA-203ENST00000481040 MYSM1Q5VVJ2 828 aa9.14□□□□□ -0.95
COPA-203ENST00000481040 SAMD7Q7Z3H4 446 aa9.14□□□□□ -0.95
COPA-203ENST00000481040 AEBP1Q8IUX7 1158 aa9.14□□□□□ -0.95
COPA-203ENST00000481040 TTC13Q8NBP0 860 aa9.14□□□□□ -0.95
COPA-203ENST00000481040 TATDN2Q93075 761 aa9.14□□□□□ -0.95
COPA-203ENST00000481040 LRCH3Q96II8 777 aa9.14□□□□□ -0.95
COPA-203ENST00000481040 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
COPA-203ENST00000481040 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
COPA-203ENST00000481040 PNMA3Q9UL41 463 aa9.13□□□□□ -0.95
COPA-203ENST00000481040 PADI6Q6TGC4 694 aa9.12□□□□□ -0.95
COPA-203ENST00000481040 CERKQ8TCT0 537 aa9.12□□□□□ -0.95
COPA-203ENST00000481040 SNRKQ9NRH2 765 aa9.12□□□□□ -0.95
COPA-203ENST00000481040 ZNF330Q9Y3S2 320 aaPredicted RBP9.12□□□□□ -0.95
COPA-203ENST00000481040 CLK2P49760 499 aaKnown RBP9.11□□□□□ -0.95
COPA-203ENST00000481040 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
COPA-203ENST00000481040 RETREG2Q8NC44 543 aa9.11□□□□□ -0.95
COPA-203ENST00000481040 RFC5P40937 340 aa9.1□□□□□ -0.95
COPA-203ENST00000481040 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
COPA-203ENST00000481040 NBPF26B4DH59 902 aa9.09□□□□□ -0.95
COPA-203ENST00000481040 OATP04181 439 aa9.09□□□□□ -0.95
COPA-203ENST00000481040 NYAP1Q6ZVC0 841 aa9.09□□□□□ -0.95
COPA-203ENST00000481040 NLRP7Q8WX94 980 aa9.09□□□□□ -0.95
COPA-203ENST00000481040 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
COPA-203ENST00000481040 FAM161AQ3B820 660 aa9.08□□□□□ -0.96
COPA-203ENST00000481040 TBC1D2Q9BYX2 928 aa9.08□□□□□ -0.96
COPA-203ENST00000481040 TMEM259Q4ZIN3 620 aa9.07□□□□□ -0.96
COPA-203ENST00000481040 DIXDC1Q155Q3 683 aa9.06□□□□□ -0.96
COPA-203ENST00000481040 PXYLP1Q8TE99 480 aa9.06□□□□□ -0.96
COPA-203ENST00000481040 PPP4CP60510 307 aa9.05□□□□□ -0.96
COPA-203ENST00000481040 KCNC4Q03721 635 aa9.05□□□□□ -0.96
COPA-203ENST00000481040 FBXO31Q5XUX0 539 aaPredicted RBP9.05□□□□□ -0.96
COPA-203ENST00000481040 PPP1R15AO75807 674 aaPredicted RBP9.04□□□□□ -0.96
COPA-203ENST00000481040 IRF5Q13568 498 aa9.04□□□□□ -0.96
COPA-203ENST00000481040 TJAP1Q5JTD0 557 aa9.04□□□□□ -0.96
COPA-203ENST00000481040 SWT1Q5T5J6 900 aaKnown RBP9.04□□□□□ -0.96
COPA-203ENST00000481040 PPP2R2DQ66LE6 453 aa9.04□□□□□ -0.96
COPA-203ENST00000481040 EYA1Q99502 592 aa9.04□□□□□ -0.96
COPA-203ENST00000481040 ADGRG1Q9Y653 693 aa9.04□□□□□ -0.96
COPA-203ENST00000481040 RGS20O76081 388 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms