RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 NOS1P29475 1434 aa20.96■□□□□ 0.95
NDC1-202ENST00000480952 APLP2Q06481 763 aa20.96■□□□□ 0.95
NDC1-202ENST00000480952 C14orf37Q86TY3 774 aa20.96■□□□□ 0.95
NDC1-202ENST00000480952 ADGRB3O60242 1522 aa20.94■□□□□ 0.94
NDC1-202ENST00000480952 NWD1Q149M9 1564 aa20.94■□□□□ 0.94
NDC1-202ENST00000480952 ZNF772Q68DY9 489 aaPredicted RBP20.94■□□□□ 0.94
NDC1-202ENST00000480952 PHLPP1O60346 1717 aa20.94■□□□□ 0.94
NDC1-202ENST00000480952 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
NDC1-202ENST00000480952 SPATA31A6Q5VVP1 1343 aa20.93■□□□□ 0.94
NDC1-202ENST00000480952 CROCC2H7BZ55 1655 aa20.93■□□□□ 0.94
NDC1-202ENST00000480952 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.94
NDC1-202ENST00000480952 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
NDC1-202ENST00000480952 PLEKHG1Q9ULL1 1385 aa20.92■□□□□ 0.94
NDC1-202ENST00000480952 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
NDC1-202ENST00000480952 TBX22Q9Y458 520 aa20.9■□□□□ 0.94
NDC1-202ENST00000480952 ATF3P18847 181 aa20.89■□□□□ 0.93
NDC1-202ENST00000480952 CADPS2Q86UW7 1296 aa20.89■□□□□ 0.93
NDC1-202ENST00000480952 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
NDC1-202ENST00000480952 RIMS2Q9UQ26 1411 aa20.88■□□□□ 0.93
NDC1-202ENST00000480952 ZFYVE9O95405 1425 aa20.87■□□□□ 0.93
NDC1-202ENST00000480952 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
NDC1-202ENST00000480952 CHGAP10645 457 aaKnown RBP20.87■□□□□ 0.93
NDC1-202ENST00000480952 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.87■□□□□ 0.93
NDC1-202ENST00000480952 C19orf44Q9H6X5 657 aa20.87■□□□□ 0.93
NDC1-202ENST00000480952 LRP6O75581 1613 aa20.86■□□□□ 0.93
NDC1-202ENST00000480952 RXRBP28702 533 aa20.86■□□□□ 0.93
NDC1-202ENST00000480952 COL16A1Q07092 1604 aaPredicted RBP20.86■□□□□ 0.93
NDC1-202ENST00000480952 RPRD2Q5VT52 1461 aaKnown RBP20.84■□□□□ 0.93
NDC1-202ENST00000480952 NUTM2DQ5VT03 806 aaPredicted RBP20.84■□□□□ 0.93
NDC1-202ENST00000480952 NUTM2BA6NNL0 878 aaPredicted RBP20.83■□□□□ 0.93
NDC1-202ENST00000480952 NUTM2EB1AL46 878 aaPredicted RBP20.83■□□□□ 0.93
NDC1-202ENST00000480952 NUTM2AQ8IVF1 878 aaPredicted RBP20.83■□□□□ 0.93
NDC1-202ENST00000480952 CHD2O14647 1828 aaKnown RBP20.82■□□□□ 0.92
NDC1-202ENST00000480952 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
NDC1-202ENST00000480952 ANKRD50Q9ULJ7 1429 aa20.79■□□□□ 0.92
NDC1-202ENST00000480952 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
NDC1-202ENST00000480952 AMOTL2Q9Y2J4 779 aa20.78■□□□□ 0.92
NDC1-202ENST00000480952 ADAMTS13Q76LX8 1427 aa20.78■□□□□ 0.92
NDC1-202ENST00000480952 ADGRL2O95490 1459 aa20.77■□□□□ 0.92
NDC1-202ENST00000480952 PIK3R4Q99570 1358 aa20.77■□□□□ 0.92
NDC1-202ENST00000480952 AHDC1Q5TGY3 1603 aaPredicted RBP20.77■□□□□ 0.92
NDC1-202ENST00000480952 TMEM131LA2VDJ0 1609 aa20.76■□□□□ 0.91
NDC1-202ENST00000480952 AFF2P51816 1311 aa20.75■□□□□ 0.91
NDC1-202ENST00000480952 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.74■□□□□ 0.91
NDC1-202ENST00000480952 GCC2Q8IWJ2 1684 aa20.73■□□□□ 0.91
NDC1-202ENST00000480952 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
NDC1-202ENST00000480952 SHPRHQ149N8 1683 aa20.73■□□□□ 0.91
NDC1-202ENST00000480952 CDK12Q9NYV4 1490 aaPredicted RBP20.71■□□□□ 0.91
NDC1-202ENST00000480952 LRRC59Q96AG4 307 aaKnown RBP20.7■□□□□ 0.9
NDC1-202ENST00000480952 DIP2AQ14689 1571 aa20.7■□□□□ 0.9
NDC1-202ENST00000480952 C8orf37Q96NL8 207 aa20.69■□□□□ 0.9
NDC1-202ENST00000480952 QTRT2Q9H974 415 aaKnown RBP20.69■□□□□ 0.9
NDC1-202ENST00000480952 PTPRUQ92729 1446 aa20.68■□□□□ 0.9
NDC1-202ENST00000480952 TRPM2O94759 1503 aa20.68■□□□□ 0.9
NDC1-202ENST00000480952 RBM6P78332 1123 aaKnown RBP20.67■□□□□ 0.9
NDC1-202ENST00000480952 SETD5Q9C0A6 1442 aa20.67■□□□□ 0.9
NDC1-202ENST00000480952 DCCP43146 1447 aa20.66■□□□□ 0.9
NDC1-202ENST00000480952 ASXL1Q8IXJ9 1541 aa20.65■□□□□ 0.9
NDC1-202ENST00000480952 DDX17Q92841 729 aaKnown RBP20.63■□□□□ 0.89
NDC1-202ENST00000480952 MST1RQ04912 1400 aa20.62■□□□□ 0.89
NDC1-202ENST00000480952 NGLY1Q96IV0 654 aa20.62■□□□□ 0.89
NDC1-202ENST00000480952 ZNF326Q5BKZ1 582 aaKnown RBP20.61■□□□□ 0.89
NDC1-202ENST00000480952 RGS12O14924 1447 aa20.61■□□□□ 0.89
NDC1-202ENST00000480952 NUP155O75694 1391 aa20.6■□□□□ 0.89
NDC1-202ENST00000480952 ADAMTS2O95450 1211 aa20.6■□□□□ 0.89
NDC1-202ENST00000480952 E9PCH4 1651 aa20.6■□□□□ 0.89
NDC1-202ENST00000480952 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
NDC1-202ENST00000480952 UNC13BO14795 1591 aa20.59■□□□□ 0.89
NDC1-202ENST00000480952 SRCAPQ6ZRS2 3230 aa20.58■□□□□ 0.88
NDC1-202ENST00000480952 METP08581 1390 aa20.58■□□□□ 0.88
NDC1-202ENST00000480952 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
NDC1-202ENST00000480952 NHSL1Q5SYE7 1610 aa20.54■□□□□ 0.88
NDC1-202ENST00000480952 FOXD1Q16676 465 aa20.54■□□□□ 0.88
NDC1-202ENST00000480952 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
NDC1-202ENST00000480952 USP21Q9UK80 565 aa20.53■□□□□ 0.88
NDC1-202ENST00000480952 ATAD2Q6PL18 1390 aa20.53■□□□□ 0.88
NDC1-202ENST00000480952 XRN1Q8IZH2 1706 aaKnown RBP20.53■□□□□ 0.88
NDC1-202ENST00000480952 IQGAP3Q86VI3 1631 aa20.53■□□□□ 0.88
NDC1-202ENST00000480952 SETBP1Q9Y6X0 1596 aa20.52■□□□□ 0.88
NDC1-202ENST00000480952 ITGAEP38570 1179 aa20.51■□□□□ 0.87
NDC1-202ENST00000480952 TRPC5Q9UL62 973 aaPredicted RBP20.51■□□□□ 0.87
NDC1-202ENST00000480952 NRXN3Q9Y4C0 1643 aa20.5■□□□□ 0.87
NDC1-202ENST00000480952 ZRANB1Q9UGI0 708 aa20.5■□□□□ 0.87
NDC1-202ENST00000480952 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
NDC1-202ENST00000480952 ORAI2Q96SN7 254 aa20.48■□□□□ 0.87
NDC1-202ENST00000480952 FNBP4Q8N3X1 1017 aaPredicted RBP20.47■□□□□ 0.87
NDC1-202ENST00000480952 SOS2Q07890 1332 aaPredicted RBP20.47■□□□□ 0.87
NDC1-202ENST00000480952 PTCH1Q13635 1447 aa20.43■□□□□ 0.86
NDC1-202ENST00000480952 CCDC125Q86Z20 511 aa20.42■□□□□ 0.86
NDC1-202ENST00000480952 NALCNQ8IZF0 1738 aa20.41■□□□□ 0.86
NDC1-202ENST00000480952 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
NDC1-202ENST00000480952 ATRNO75882 1429 aa20.39■□□□□ 0.85
NDC1-202ENST00000480952 ROBO2Q9HCK4 1378 aa20.39■□□□□ 0.85
NDC1-202ENST00000480952 NEXMIFQ5QGS0 1516 aa20.38■□□□□ 0.85
NDC1-202ENST00000480952 SPHKAPQ2M3C7 1700 aa20.38■□□□□ 0.85
NDC1-202ENST00000480952 ESCO1Q5FWF5 840 aa20.37■□□□□ 0.85
NDC1-202ENST00000480952 LAMC1P11047 1609 aa20.35■□□□□ 0.85
NDC1-202ENST00000480952 NPHP3Q7Z494 1330 aa20.35■□□□□ 0.85
NDC1-202ENST00000480952 GJD4Q96KN9 370 aaPredicted RBP20.35■□□□□ 0.85
NDC1-202ENST00000480952 BCL9LQ86UU0 1499 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms