RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
SIK3-209ENST00000480222 A2ML1A8K2U0 1454 aa17.98■□□□□ 0.47
SIK3-209ENST00000480222 LAMC1P11047 1609 aa17.97■□□□□ 0.47
SIK3-209ENST00000480222 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.47
SIK3-209ENST00000480222 ZFYVE9O95405 1425 aa17.96■□□□□ 0.47
SIK3-209ENST00000480222 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
SIK3-209ENST00000480222 CHGAP10645 457 aaKnown RBP17.95■□□□□ 0.46
SIK3-209ENST00000480222 CEBPAP49715 358 aaPredicted RBP17.94■□□□□ 0.46
SIK3-209ENST00000480222 ZNF326Q5BKZ1 582 aaKnown RBP17.94■□□□□ 0.46
SIK3-209ENST00000480222 FBXO41Q8TF61 875 aa17.93■□□□□ 0.46
SIK3-209ENST00000480222 PIK3C2GO75747 1445 aa17.92■□□□□ 0.46
SIK3-209ENST00000480222 NBPF8Q3BBV2 869 aa17.92■□□□□ 0.46
SIK3-209ENST00000480222 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
SIK3-209ENST00000480222 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
SIK3-209ENST00000480222 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
SIK3-209ENST00000480222 SLIT1O75093 1534 aa17.9■□□□□ 0.46
SIK3-209ENST00000480222 GPRASP1Q5JY77 1395 aa17.9■□□□□ 0.46
SIK3-209ENST00000480222 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.46
SIK3-209ENST00000480222 SETBP1Q9Y6X0 1596 aa17.89■□□□□ 0.45
SIK3-209ENST00000480222 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
SIK3-209ENST00000480222 TMEM2Q9UHN6 1383 aa17.88■□□□□ 0.45
SIK3-209ENST00000480222 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
SIK3-209ENST00000480222 ROCK2O75116 1388 aaKnown RBP17.87■□□□□ 0.45
SIK3-209ENST00000480222 IQGAP1P46940 1657 aa17.85■□□□□ 0.45
SIK3-209ENST00000480222 ADGRF5Q8IZF2 1346 aa17.85■□□□□ 0.45
SIK3-209ENST00000480222 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
SIK3-209ENST00000480222 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
SIK3-209ENST00000480222 HDGFP51858 240 aaKnown RBP17.83■□□□□ 0.44
SIK3-209ENST00000480222 NRXN3Q9Y4C0 1643 aa17.82■□□□□ 0.44
SIK3-209ENST00000480222 THEMISQ8N1K5 641 aaPredicted RBP17.81■□□□□ 0.44
SIK3-209ENST00000480222 ADGRB1O14514 1584 aa17.81■□□□□ 0.44
SIK3-209ENST00000480222 SETD1AO15047 1707 aaKnown RBP17.81■□□□□ 0.44
SIK3-209ENST00000480222 USP47Q96K76 1375 aa17.8■□□□□ 0.44
SIK3-209ENST00000480222 HSPA2P54652 639 aa17.8■□□□□ 0.44
SIK3-209ENST00000480222 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
SIK3-209ENST00000480222 CARD11Q9BXL7 1154 aa17.79■□□□□ 0.44
SIK3-209ENST00000480222 SCAF11Q99590 1463 aaKnown RBP17.79■□□□□ 0.44
SIK3-209ENST00000480222 DIP2AQ14689 1571 aa17.79■□□□□ 0.44
SIK3-209ENST00000480222 ALKQ9UM73 1620 aa17.78■□□□□ 0.44
SIK3-209ENST00000480222 POLR1AO95602 1720 aaPredicted RBP17.78■□□□□ 0.44
SIK3-209ENST00000480222 PLEKHG1Q9ULL1 1385 aa17.78■□□□□ 0.44
SIK3-209ENST00000480222 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.44
SIK3-209ENST00000480222 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
SIK3-209ENST00000480222 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.44
SIK3-209ENST00000480222 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.43
SIK3-209ENST00000480222 EID1Q9Y6B2 187 aa17.76■□□□□ 0.43
SIK3-209ENST00000480222 NBPF1Q3BBV0 1214 aa17.74■□□□□ 0.43
SIK3-209ENST00000480222 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
SIK3-209ENST00000480222 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
SIK3-209ENST00000480222 KNDC1Q76NI1 1749 aa17.72■□□□□ 0.43
SIK3-209ENST00000480222 ARHGEF28Q8N1W1 1705 aaKnown RBP17.72■□□□□ 0.43
SIK3-209ENST00000480222 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
SIK3-209ENST00000480222 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
SIK3-209ENST00000480222 MED14O60244 1454 aa17.7■□□□□ 0.42
SIK3-209ENST00000480222 TXNDC2Q86VQ3 553 aa17.7■□□□□ 0.42
SIK3-209ENST00000480222 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
SIK3-209ENST00000480222 LTKP29376 864 aa17.69■□□□□ 0.42
SIK3-209ENST00000480222 YTHDC2Q9H6S0 1430 aaKnown RBP17.68■□□□□ 0.42
SIK3-209ENST00000480222 ANKLE2Q86XL3 938 aa17.67■□□□□ 0.42
SIK3-209ENST00000480222 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
SIK3-209ENST00000480222 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
SIK3-209ENST00000480222 TECPR2O15040 1411 aa17.66■□□□□ 0.42
SIK3-209ENST00000480222 CPS1P31327 1500 aa17.66■□□□□ 0.42
SIK3-209ENST00000480222 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
SIK3-209ENST00000480222 CERKQ8TCT0 537 aa17.64■□□□□ 0.41
SIK3-209ENST00000480222 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
SIK3-209ENST00000480222 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.41
SIK3-209ENST00000480222 ST20-MTHFSA0A0A6YYL1 179 aa17.63■□□□□ 0.41
SIK3-209ENST00000480222 XRN1Q8IZH2 1706 aaKnown RBP17.63■□□□□ 0.41
SIK3-209ENST00000480222 SLC24A1O60721 1099 aa17.62■□□□□ 0.41
SIK3-209ENST00000480222 BCANQ96GW7 911 aa17.62■□□□□ 0.41
SIK3-209ENST00000480222 METP08581 1390 aa17.62■□□□□ 0.41
SIK3-209ENST00000480222 ABCC11Q96J66 1382 aa17.62■□□□□ 0.41
SIK3-209ENST00000480222 TMEM132EQ6IEE7 984 aa17.61■□□□□ 0.41
SIK3-209ENST00000480222 TBX22Q9Y458 520 aa17.61■□□□□ 0.41
SIK3-209ENST00000480222 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
SIK3-209ENST00000480222 CENPJQ9HC77 1338 aaPredicted RBP17.6■□□□□ 0.41
SIK3-209ENST00000480222 PTCH1Q13635 1447 aa17.6■□□□□ 0.41
SIK3-209ENST00000480222 FAM135BQ49AJ0 1406 aa17.59■□□□□ 0.41
SIK3-209ENST00000480222 CCDC7Q96M83 1385 aa17.59■□□□□ 0.41
SIK3-209ENST00000480222 TESK2Q96S53 571 aa17.59■□□□□ 0.41
SIK3-209ENST00000480222 STRCQ7RTU9 1775 aa17.58■□□□□ 0.4
SIK3-209ENST00000480222 NWD1Q149M9 1564 aa17.57■□□□□ 0.4
SIK3-209ENST00000480222 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
SIK3-209ENST00000480222 CHD2O14647 1828 aaKnown RBP17.56■□□□□ 0.4
SIK3-209ENST00000480222 WASHC2AQ641Q2 1341 aa17.56■□□□□ 0.4
SIK3-209ENST00000480222 KIF7Q2M1P5 1343 aa17.55■□□□□ 0.4
SIK3-209ENST00000480222 TMF1P82094 1093 aa17.55■□□□□ 0.4
SIK3-209ENST00000480222 SIRT1Q96EB6 747 aa17.55■□□□□ 0.4
SIK3-209ENST00000480222 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
SIK3-209ENST00000480222 ADGRB2O60241 1585 aa17.54■□□□□ 0.4
SIK3-209ENST00000480222 SLC26A8Q96RN1 970 aa17.54■□□□□ 0.4
SIK3-209ENST00000480222 PTPRUQ92729 1446 aa17.54■□□□□ 0.4
SIK3-209ENST00000480222 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
SIK3-209ENST00000480222 CDCA8Q53HL2 280 aa17.53■□□□□ 0.4
SIK3-209ENST00000480222 STK26Q9P289 416 aa17.53■□□□□ 0.4
SIK3-209ENST00000480222 DMRT2Q9Y5R5 561 aa17.53■□□□□ 0.4
SIK3-209ENST00000480222 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.4
SIK3-209ENST00000480222 NCKAP5LQ9HCH0 1330 aa17.51■□□□□ 0.39
SIK3-209ENST00000480222 NKTRP30414 1462 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms