RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 DCAF11Q8TEB1 546 aa24.18■■□□□ 1.46
SCAMP3-207ENST00000480219 SLIT1O75093 1534 aa24.16■■□□□ 1.46
SCAMP3-207ENST00000480219 ARHGAP23Q9P227 1491 aa24.16■■□□□ 1.46
SCAMP3-207ENST00000480219 CHGAP10645 457 aaKnown RBP24.15■■□□□ 1.46
SCAMP3-207ENST00000480219 NBPF8Q3BBV2 869 aa24.14■■□□□ 1.45
SCAMP3-207ENST00000480219 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
SCAMP3-207ENST00000480219 ZNF326Q5BKZ1 582 aaKnown RBP24.12■■□□□ 1.45
SCAMP3-207ENST00000480219 STAG3Q9UJ98 1225 aa24.12■■□□□ 1.45
SCAMP3-207ENST00000480219 RALGAPBQ86X10 1494 aa24.12■■□□□ 1.45
SCAMP3-207ENST00000480219 RIMS2Q9UQ26 1411 aa24.11■■□□□ 1.45
SCAMP3-207ENST00000480219 KIAA1210Q9ULL0 1709 aa24.11■■□□□ 1.45
SCAMP3-207ENST00000480219 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
SCAMP3-207ENST00000480219 TRPM1Q7Z4N2 1603 aa24.1■■□□□ 1.45
SCAMP3-207ENST00000480219 VGFO15240 615 aaPredicted RBP24.09■■□□□ 1.45
SCAMP3-207ENST00000480219 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
SCAMP3-207ENST00000480219 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
SCAMP3-207ENST00000480219 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.45
SCAMP3-207ENST00000480219 ADGRF5Q8IZF2 1346 aa24.08■■□□□ 1.44
SCAMP3-207ENST00000480219 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.07■■□□□ 1.44
SCAMP3-207ENST00000480219 GPRASP1Q5JY77 1395 aa24.06■■□□□ 1.44
SCAMP3-207ENST00000480219 LAMC1P11047 1609 aa24.05■■□□□ 1.44
SCAMP3-207ENST00000480219 HDGFP51858 240 aaKnown RBP24.04■■□□□ 1.44
SCAMP3-207ENST00000480219 SETBP1Q9Y6X0 1596 aa24.03■■□□□ 1.44
SCAMP3-207ENST00000480219 NRXN3Q9Y4C0 1643 aa23.99■■□□□ 1.43
SCAMP3-207ENST00000480219 C14orf93Q9H972 538 aaKnown RBP23.99■■□□□ 1.43
SCAMP3-207ENST00000480219 PLEKHG1Q9ULL1 1385 aa23.99■■□□□ 1.43
SCAMP3-207ENST00000480219 SCAF11Q99590 1463 aaKnown RBP23.99■■□□□ 1.43
SCAMP3-207ENST00000480219 LTKP29376 864 aa23.97■■□□□ 1.43
SCAMP3-207ENST00000480219 LMTK3Q96Q04 1460 aa23.97■■□□□ 1.43
SCAMP3-207ENST00000480219 SETD1AO15047 1707 aaKnown RBP23.96■■□□□ 1.43
SCAMP3-207ENST00000480219 ADGRB1O14514 1584 aa23.96■■□□□ 1.43
SCAMP3-207ENST00000480219 EID1Q9Y6B2 187 aa23.95■■□□□ 1.42
SCAMP3-207ENST00000480219 ALKQ9UM73 1620 aa23.95■■□□□ 1.42
SCAMP3-207ENST00000480219 MED14O60244 1454 aa23.94■■□□□ 1.42
SCAMP3-207ENST00000480219 ROCK2O75116 1388 aaKnown RBP23.94■■□□□ 1.42
SCAMP3-207ENST00000480219 TXNDC2Q86VQ3 553 aa23.94■■□□□ 1.42
SCAMP3-207ENST00000480219 NBPF1Q3BBV0 1214 aa23.92■■□□□ 1.42
SCAMP3-207ENST00000480219 CFAP70Q5T0N1 1121 aa23.92■■□□□ 1.42
SCAMP3-207ENST00000480219 NUTM2DQ5VT03 806 aaPredicted RBP23.92■■□□□ 1.42
SCAMP3-207ENST00000480219 ASXL1Q8IXJ9 1541 aa23.92■■□□□ 1.42
SCAMP3-207ENST00000480219 IQGAP1P46940 1657 aa23.92■■□□□ 1.42
SCAMP3-207ENST00000480219 ADAMTS13Q76LX8 1427 aa23.92■■□□□ 1.42
SCAMP3-207ENST00000480219 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
SCAMP3-207ENST00000480219 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
SCAMP3-207ENST00000480219 ANKLE2Q86XL3 938 aa23.9■■□□□ 1.42
SCAMP3-207ENST00000480219 CARD11Q9BXL7 1154 aa23.87■■□□□ 1.41
SCAMP3-207ENST00000480219 USP47Q96K76 1375 aa23.85■■□□□ 1.41
SCAMP3-207ENST00000480219 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.41
SCAMP3-207ENST00000480219 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
SCAMP3-207ENST00000480219 NPHP4O75161 1426 aaPredicted RBP23.82■■□□□ 1.4
SCAMP3-207ENST00000480219 PIK3R4Q99570 1358 aa23.8■■□□□ 1.4
SCAMP3-207ENST00000480219 DLC1Q96QB1 1528 aa23.79■■□□□ 1.4
SCAMP3-207ENST00000480219 METP08581 1390 aa23.79■■□□□ 1.4
SCAMP3-207ENST00000480219 LRPPRCP42704 1394 aaKnown RBP23.79■■□□□ 1.4
SCAMP3-207ENST00000480219 TECPR2O15040 1411 aa23.79■■□□□ 1.4
SCAMP3-207ENST00000480219 YTHDC2Q9H6S0 1430 aaKnown RBP23.79■■□□□ 1.4
SCAMP3-207ENST00000480219 KNDC1Q76NI1 1749 aa23.79■■□□□ 1.4
SCAMP3-207ENST00000480219 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
SCAMP3-207ENST00000480219 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
SCAMP3-207ENST00000480219 TMEM132EQ6IEE7 984 aa23.77■■□□□ 1.4
SCAMP3-207ENST00000480219 STRCQ7RTU9 1775 aa23.76■■□□□ 1.39
SCAMP3-207ENST00000480219 EIF3AQ14152 1382 aaKnown RBP23.76■■□□□ 1.39
SCAMP3-207ENST00000480219 ARHGEF28Q8N1W1 1705 aaKnown RBP23.76■■□□□ 1.39
SCAMP3-207ENST00000480219 NCKAP5LQ9HCH0 1330 aa23.75■■□□□ 1.39
SCAMP3-207ENST00000480219 HSPA2P54652 639 aa23.74■■□□□ 1.39
SCAMP3-207ENST00000480219 SBNO2Q9Y2G9 1366 aa23.74■■□□□ 1.39
SCAMP3-207ENST00000480219 CPS1P31327 1500 aa23.74■■□□□ 1.39
SCAMP3-207ENST00000480219 SIRT1Q96EB6 747 aa23.73■■□□□ 1.39
SCAMP3-207ENST00000480219 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
SCAMP3-207ENST00000480219 ZNF316A6NFI3 1004 aaPredicted RBP23.72■■□□□ 1.39
SCAMP3-207ENST00000480219 SLC26A8Q96RN1 970 aa23.72■■□□□ 1.39
SCAMP3-207ENST00000480219 PTPRUQ92729 1446 aa23.72■■□□□ 1.39
SCAMP3-207ENST00000480219 ST20-MTHFSA0A0A6YYL1 179 aa23.71■■□□□ 1.39
SCAMP3-207ENST00000480219 FAM135BQ49AJ0 1406 aa23.7■■□□□ 1.38
SCAMP3-207ENST00000480219 BCANQ96GW7 911 aa23.7■■□□□ 1.38
SCAMP3-207ENST00000480219 PTCH1Q13635 1447 aa23.69■■□□□ 1.38
SCAMP3-207ENST00000480219 TESK2Q96S53 571 aa23.69■■□□□ 1.38
SCAMP3-207ENST00000480219 NWD1Q149M9 1564 aa23.69■■□□□ 1.38
SCAMP3-207ENST00000480219 CHD2O14647 1828 aaKnown RBP23.68■■□□□ 1.38
SCAMP3-207ENST00000480219 TRAK1Q9UPV9 953 aa23.68■■□□□ 1.38
SCAMP3-207ENST00000480219 SLC24A1O60721 1099 aa23.66■■□□□ 1.38
SCAMP3-207ENST00000480219 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
SCAMP3-207ENST00000480219 CENPJQ9HC77 1338 aaPredicted RBP23.65■■□□□ 1.38
SCAMP3-207ENST00000480219 QRICH2Q9H0J4 1663 aa23.64■■□□□ 1.38
SCAMP3-207ENST00000480219 HIRIP3Q9BW71 556 aaPredicted RBP23.62■■□□□ 1.37
SCAMP3-207ENST00000480219 STK26Q9P289 416 aa23.61■■□□□ 1.37
SCAMP3-207ENST00000480219 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
SCAMP3-207ENST00000480219 ROBO2Q9HCK4 1378 aa23.61■■□□□ 1.37
SCAMP3-207ENST00000480219 KCNA6P17658 529 aa23.59■■□□□ 1.37
SCAMP3-207ENST00000480219 NKTRP30414 1462 aaKnown RBP23.58■■□□□ 1.37
SCAMP3-207ENST00000480219 PRAM1Q96QH2 718 aa23.58■■□□□ 1.37
SCAMP3-207ENST00000480219 C11orf95C9JLR9 678 aaPredicted RBP23.57■■□□□ 1.36
SCAMP3-207ENST00000480219 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
SCAMP3-207ENST00000480219 ADGRB2O60241 1585 aa23.57■■□□□ 1.36
SCAMP3-207ENST00000480219 CCDC7Q96M83 1385 aa23.56■■□□□ 1.36
SCAMP3-207ENST00000480219 PLEKHH1Q9ULM0 1364 aa23.56■■□□□ 1.36
SCAMP3-207ENST00000480219 WASHC2AQ641Q2 1341 aa23.56■■□□□ 1.36
SCAMP3-207ENST00000480219 TMF1P82094 1093 aa23.55■■□□□ 1.36
SCAMP3-207ENST00000480219 TULP4Q9NRJ4 1543 aa23.54■■□□□ 1.36
SCAMP3-207ENST00000480219 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms