RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
PKNOX1-206ENST00000480179 WASHC2CQ9Y4E1 1318 aa20.23■□□□□ 0.83
PKNOX1-206ENST00000480179 NEURL4Q96JN8 1562 aa20.23■□□□□ 0.83
PKNOX1-206ENST00000480179 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
PKNOX1-206ENST00000480179 ZC3H13Q5T200 1668 aaKnown RBP20.23■□□□□ 0.83
PKNOX1-206ENST00000480179 ST20-MTHFSA0A0A6YYL1 179 aa20.22■□□□□ 0.83
PKNOX1-206ENST00000480179 CCER2I3L3R5 266 aa20.22■□□□□ 0.83
PKNOX1-206ENST00000480179 ZMYM3Q14202 1370 aa20.21■□□□□ 0.83
PKNOX1-206ENST00000480179 STRCQ7RTU9 1775 aa20.2■□□□□ 0.82
PKNOX1-206ENST00000480179 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
PKNOX1-206ENST00000480179 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
PKNOX1-206ENST00000480179 ADGRB3O60242 1522 aa20.18■□□□□ 0.82
PKNOX1-206ENST00000480179 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
PKNOX1-206ENST00000480179 IQGAP1P46940 1657 aa20.15■□□□□ 0.82
PKNOX1-206ENST00000480179 MYOM2P54296 1465 aa20.14■□□□□ 0.82
PKNOX1-206ENST00000480179 SYNMO15061 1565 aa20.14■□□□□ 0.81
PKNOX1-206ENST00000480179 CHGAP10645 457 aaKnown RBP20.13■□□□□ 0.81
PKNOX1-206ENST00000480179 STAC3Q96MF2 364 aa20.13■□□□□ 0.81
PKNOX1-206ENST00000480179 KIAA1210Q9ULL0 1709 aa20.13■□□□□ 0.81
PKNOX1-206ENST00000480179 NOS1P29475 1434 aa20.12■□□□□ 0.81
PKNOX1-206ENST00000480179 PIK3C2BO00750 1634 aa20.11■□□□□ 0.81
PKNOX1-206ENST00000480179 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
PKNOX1-206ENST00000480179 PPLO60437 1756 aa20.1■□□□□ 0.81
PKNOX1-206ENST00000480179 CLTCQ00610 1675 aaKnown RBP20.09■□□□□ 0.81
PKNOX1-206ENST00000480179 ADGRF5Q8IZF2 1346 aa20.08■□□□□ 0.8
PKNOX1-206ENST00000480179 PRKRIP1Q9H875 184 aaPredicted RBP20.07■□□□□ 0.8
PKNOX1-206ENST00000480179 NCKAP5LQ9HCH0 1330 aa20.06■□□□□ 0.8
PKNOX1-206ENST00000480179 SCAF11Q99590 1463 aaKnown RBP20.06■□□□□ 0.8
PKNOX1-206ENST00000480179 NRXN1Q9ULB1 1477 aa20.06■□□□□ 0.8
PKNOX1-206ENST00000480179 DISP3Q9P2K9 1392 aa20.05■□□□□ 0.8
PKNOX1-206ENST00000480179 TESK2Q96S53 571 aa20.05■□□□□ 0.8
PKNOX1-206ENST00000480179 GTF3C3Q9Y5Q9 886 aa20.05■□□□□ 0.8
PKNOX1-206ENST00000480179 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
PKNOX1-206ENST00000480179 CFAP70Q5T0N1 1121 aa20.02■□□□□ 0.8
PKNOX1-206ENST00000480179 LTBP4Q8N2S1 1624 aa20.02■□□□□ 0.8
PKNOX1-206ENST00000480179 MYO5BQ9ULV0 1848 aa20■□□□□ 0.79
PKNOX1-206ENST00000480179 IQSEC2Q5JU85 1478 aa20■□□□□ 0.79
PKNOX1-206ENST00000480179 CEP170BQ9Y4F5 1589 aaPredicted RBP20■□□□□ 0.79
PKNOX1-206ENST00000480179 MYO3AQ8NEV4 1616 aa20■□□□□ 0.79
PKNOX1-206ENST00000480179 TMF1P82094 1093 aa19.99■□□□□ 0.79
PKNOX1-206ENST00000480179 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
PKNOX1-206ENST00000480179 ERVK-7P63135 1459 aa19.99■□□□□ 0.79
PKNOX1-206ENST00000480179 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
PKNOX1-206ENST00000480179 NEXMIFQ5QGS0 1516 aa19.98■□□□□ 0.79
PKNOX1-206ENST00000480179 CCDC184Q52MB2 194 aa19.98■□□□□ 0.79
PKNOX1-206ENST00000480179 RPGRIP1LQ68CZ1 1315 aa19.98■□□□□ 0.79
PKNOX1-206ENST00000480179 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
PKNOX1-206ENST00000480179 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
PKNOX1-206ENST00000480179 IDI1Q13907 227 aa19.96■□□□□ 0.79
PKNOX1-206ENST00000480179 FBXO31Q5XUX0 539 aaPredicted RBP19.96■□□□□ 0.79
PKNOX1-206ENST00000480179 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
PKNOX1-206ENST00000480179 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
PKNOX1-206ENST00000480179 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
PKNOX1-206ENST00000480179 A2ML1A8K2U0 1454 aa19.95■□□□□ 0.78
PKNOX1-206ENST00000480179 SLC52A1Q9NWF4 448 aa19.95■□□□□ 0.78
PKNOX1-206ENST00000480179 TNRQ92752 1358 aa19.94■□□□□ 0.78
PKNOX1-206ENST00000480179 NUTM2DQ5VT03 806 aaPredicted RBP19.94■□□□□ 0.78
PKNOX1-206ENST00000480179 UBAP1LF5GYI3 381 aa19.93■□□□□ 0.78
PKNOX1-206ENST00000480179 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
PKNOX1-206ENST00000480179 THEMISQ8N1K5 641 aaPredicted RBP19.9■□□□□ 0.78
PKNOX1-206ENST00000480179 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
PKNOX1-206ENST00000480179 KDM5AP29375 1690 aaKnown RBP19.9■□□□□ 0.78
PKNOX1-206ENST00000480179 C14orf93Q9H972 538 aaKnown RBP19.9■□□□□ 0.78
PKNOX1-206ENST00000480179 ANKLE2Q86XL3 938 aa19.89■□□□□ 0.77
PKNOX1-206ENST00000480179 VGFO15240 615 aaPredicted RBP19.88■□□□□ 0.77
PKNOX1-206ENST00000480179 MYOM1P52179 1685 aa19.87■□□□□ 0.77
PKNOX1-206ENST00000480179 HNRNPUQ00839 825 aaKnown RBP eCLIP19.87■□□□□ 0.77
PKNOX1-206ENST00000480179 FAM9BQ8IZU0 186 aa19.87■□□□□ 0.77
PKNOX1-206ENST00000480179 PANK3Q9H999 370 aa19.87■□□□□ 0.77
PKNOX1-206ENST00000480179 QRICH2Q9H0J4 1663 aa19.87■□□□□ 0.77
PKNOX1-206ENST00000480179 CDCA8Q53HL2 280 aa19.86■□□□□ 0.77
PKNOX1-206ENST00000480179 TMEM132EQ6IEE7 984 aa19.85■□□□□ 0.77
PKNOX1-206ENST00000480179 KTN1Q86UP2 1357 aaKnown RBP19.85■□□□□ 0.77
PKNOX1-206ENST00000480179 ZFYVE9O95405 1425 aa19.85■□□□□ 0.77
PKNOX1-206ENST00000480179 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
PKNOX1-206ENST00000480179 NLRP1Q9C000 1473 aa19.84■□□□□ 0.77
PKNOX1-206ENST00000480179 STAG3Q9UJ98 1225 aa19.84■□□□□ 0.77
PKNOX1-206ENST00000480179 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
PKNOX1-206ENST00000480179 RALBP1Q15311 655 aa19.83■□□□□ 0.77
PKNOX1-206ENST00000480179 CENPJQ9HC77 1338 aaPredicted RBP19.83■□□□□ 0.76
PKNOX1-206ENST00000480179 PER1O15534 1290 aaPredicted RBP19.82■□□□□ 0.76
PKNOX1-206ENST00000480179 ILDR2Q71H61 639 aa19.82■□□□□ 0.76
PKNOX1-206ENST00000480179 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
PKNOX1-206ENST00000480179 MYBBP1AQ9BQG0 1328 aaKnown RBP19.82■□□□□ 0.76
PKNOX1-206ENST00000480179 PARD3Q8TEW0 1356 aa19.81■□□□□ 0.76
PKNOX1-206ENST00000480179 ASXL1Q8IXJ9 1541 aa19.81■□□□□ 0.76
PKNOX1-206ENST00000480179 SBNO2Q9Y2G9 1366 aa19.8■□□□□ 0.76
PKNOX1-206ENST00000480179 TOM1O60784 492 aa19.79■□□□□ 0.76
PKNOX1-206ENST00000480179 CC2D1BQ5T0F9 858 aaKnown RBP19.79■□□□□ 0.76
PKNOX1-206ENST00000480179 CPS1P31327 1500 aa19.78■□□□□ 0.76
PKNOX1-206ENST00000480179 SOCS7O14512 581 aa19.78■□□□□ 0.76
PKNOX1-206ENST00000480179 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
PKNOX1-206ENST00000480179 BRD4O60885 1362 aaPredicted RBP19.77■□□□□ 0.75
PKNOX1-206ENST00000480179 TMC1Q8TDI8 760 aa19.76■□□□□ 0.75
PKNOX1-206ENST00000480179 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
PKNOX1-206ENST00000480179 NPHP4O75161 1426 aaPredicted RBP19.75■□□□□ 0.75
PKNOX1-206ENST00000480179 RIMS2Q9UQ26 1411 aa19.75■□□□□ 0.75
PKNOX1-206ENST00000480179 ALKQ9UM73 1620 aa19.74■□□□□ 0.75
PKNOX1-206ENST00000480179 KNSTRNQ9Y448 316 aa19.73■□□□□ 0.75
PKNOX1-206ENST00000480179 MED14O60244 1454 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms