RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 RRAGDQ9NQL2 400 aaPredicted RBP17.48■□□□□ 0.39
C9orf78-205ENST00000480023 NINLQ9Y2I6 1382 aa17.48■□□□□ 0.39
C9orf78-205ENST00000480023 ANTXR1Q9H6X2 564 aa17.48■□□□□ 0.39
C9orf78-205ENST00000480023 SYNMO15061 1565 aa17.47■□□□□ 0.39
C9orf78-205ENST00000480023 PLXNC1O60486 1568 aa17.47■□□□□ 0.39
C9orf78-205ENST00000480023 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
C9orf78-205ENST00000480023 ABCA8O94911 1581 aa17.46■□□□□ 0.39
C9orf78-205ENST00000480023 CGNL1Q0VF96 1302 aa17.45■□□□□ 0.38
C9orf78-205ENST00000480023 ATP10AO60312 1499 aa17.45■□□□□ 0.38
C9orf78-205ENST00000480023 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
C9orf78-205ENST00000480023 AMER1Q5JTC6 1135 aaPredicted RBP17.44■□□□□ 0.38
C9orf78-205ENST00000480023 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
C9orf78-205ENST00000480023 PDE3AQ14432 1141 aa17.44■□□□□ 0.38
C9orf78-205ENST00000480023 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
C9orf78-205ENST00000480023 IGHDP01880 384 aa17.43■□□□□ 0.38
C9orf78-205ENST00000480023 ASXL1Q8IXJ9 1541 aa17.43■□□□□ 0.38
C9orf78-205ENST00000480023 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
C9orf78-205ENST00000480023 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
C9orf78-205ENST00000480023 FSD2A1L4K1 749 aa17.42■□□□□ 0.38
C9orf78-205ENST00000480023 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
C9orf78-205ENST00000480023 KNSTRNQ9Y448 316 aa17.42■□□□□ 0.38
C9orf78-205ENST00000480023 SEC24BO95487 1268 aa17.41■□□□□ 0.38
C9orf78-205ENST00000480023 E9PSI1 815 aa17.41■□□□□ 0.38
C9orf78-205ENST00000480023 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
C9orf78-205ENST00000480023 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.38
C9orf78-205ENST00000480023 RGL3Q3MIN7 710 aa17.39■□□□□ 0.38
C9orf78-205ENST00000480023 SAMD9LQ8IVG5 1584 aa17.39■□□□□ 0.37
C9orf78-205ENST00000480023 BCAR3O75815 825 aa17.39■□□□□ 0.37
C9orf78-205ENST00000480023 CLCN1P35523 988 aa17.39■□□□□ 0.37
C9orf78-205ENST00000480023 CLUAP1Q96AJ1 413 aa17.39■□□□□ 0.37
C9orf78-205ENST00000480023 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
C9orf78-205ENST00000480023 AAMPQ13685 434 aa17.38■□□□□ 0.37
C9orf78-205ENST00000480023 TBC1D32Q96NH3 1257 aa17.38■□□□□ 0.37
C9orf78-205ENST00000480023 SLKQ9H2G2 1235 aaPredicted RBP17.38■□□□□ 0.37
C9orf78-205ENST00000480023 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
C9orf78-205ENST00000480023 RSPH4AQ5TD94 716 aa17.38■□□□□ 0.37
C9orf78-205ENST00000480023 ATP10BO94823 1461 aa17.37■□□□□ 0.37
C9orf78-205ENST00000480023 GLIPR1L2Q4G1C9 344 aa17.37■□□□□ 0.37
C9orf78-205ENST00000480023 MYOM1P52179 1685 aa17.37■□□□□ 0.37
C9orf78-205ENST00000480023 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.37
C9orf78-205ENST00000480023 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
C9orf78-205ENST00000480023 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.37
C9orf78-205ENST00000480023 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
C9orf78-205ENST00000480023 GOLGA6L3A6NEY3 463 aa17.35■□□□□ 0.37
C9orf78-205ENST00000480023 CDCA8Q53HL2 280 aa17.35■□□□□ 0.37
C9orf78-205ENST00000480023 TBC1D2Q9BYX2 928 aa17.35■□□□□ 0.37
C9orf78-205ENST00000480023 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
C9orf78-205ENST00000480023 CDC42BPBQ9Y5S2 1711 aa17.34■□□□□ 0.37
C9orf78-205ENST00000480023 APAF1O14727 1248 aa17.33■□□□□ 0.36
C9orf78-205ENST00000480023 SCAPERQ9BY12 1400 aa17.32■□□□□ 0.36
C9orf78-205ENST00000480023 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
C9orf78-205ENST00000480023 MCM4P33991 863 aa17.32■□□□□ 0.36
C9orf78-205ENST00000480023 PMFBP1Q8TBY8 1022 aa17.32■□□□□ 0.36
C9orf78-205ENST00000480023 CENPJQ9HC77 1338 aaPredicted RBP17.32■□□□□ 0.36
C9orf78-205ENST00000480023 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
C9orf78-205ENST00000480023 SCAF11Q99590 1463 aaKnown RBP17.3■□□□□ 0.36
C9orf78-205ENST00000480023 RRP9O43818 475 aaKnown RBP17.3■□□□□ 0.36
C9orf78-205ENST00000480023 PKNOX2Q96KN3 472 aa17.29■□□□□ 0.36
C9orf78-205ENST00000480023 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
C9orf78-205ENST00000480023 DUOX2Q9NRD8 1548 aa17.29■□□□□ 0.36
C9orf78-205ENST00000480023 MRE11P49959 708 aa17.28■□□□□ 0.36
C9orf78-205ENST00000480023 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
C9orf78-205ENST00000480023 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
C9orf78-205ENST00000480023 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
C9orf78-205ENST00000480023 PANK1Q8TE04 598 aa17.27■□□□□ 0.36
C9orf78-205ENST00000480023 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.36
C9orf78-205ENST00000480023 KDM5AP29375 1690 aaKnown RBP17.27■□□□□ 0.35
C9orf78-205ENST00000480023 NAP1L5Q96NT1 182 aaPredicted RBP17.26■□□□□ 0.35
C9orf78-205ENST00000480023 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
C9orf78-205ENST00000480023 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
C9orf78-205ENST00000480023 CHMP5Q9NZZ3 219 aa17.26■□□□□ 0.35
C9orf78-205ENST00000480023 TTC37Q6PGP7 1564 aa17.25■□□□□ 0.35
C9orf78-205ENST00000480023 STAC3Q96MF2 364 aa17.25■□□□□ 0.35
C9orf78-205ENST00000480023 CEP152O94986 1710 aa17.24■□□□□ 0.35
C9orf78-205ENST00000480023 HSP90AA1P07900 732 aaKnown RBP17.24■□□□□ 0.35
C9orf78-205ENST00000480023 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
C9orf78-205ENST00000480023 WWC1Q8IX03 1113 aa17.24■□□□□ 0.35
C9orf78-205ENST00000480023 TRAK2O60296 914 aa17.23■□□□□ 0.35
C9orf78-205ENST00000480023 HSP90AA2PQ14568 343 aaPredicted RBP17.23■□□□□ 0.35
C9orf78-205ENST00000480023 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
C9orf78-205ENST00000480023 PDZRN3Q9UPQ7 1066 aa17.23■□□□□ 0.35
C9orf78-205ENST00000480023 PCDHB15Q9Y5E8 787 aa17.23■□□□□ 0.35
C9orf78-205ENST00000480023 POLR3AO14802 1390 aaPredicted RBP17.23■□□□□ 0.35
C9orf78-205ENST00000480023 KIAA1210Q9ULL0 1709 aa17.22■□□□□ 0.35
C9orf78-205ENST00000480023 RARSP54136 660 aaKnown RBP17.21■□□□□ 0.35
C9orf78-205ENST00000480023 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.35
C9orf78-205ENST00000480023 DDX11L8A8MPP1 907 aa17.21■□□□□ 0.35
C9orf78-205ENST00000480023 IQSEC2Q5JU85 1478 aa17.2■□□□□ 0.34
C9orf78-205ENST00000480023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
C9orf78-205ENST00000480023 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
C9orf78-205ENST00000480023 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
C9orf78-205ENST00000480023 GRPEL1Q9HAV7 217 aa17.2■□□□□ 0.34
C9orf78-205ENST00000480023 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
C9orf78-205ENST00000480023 TRPM2O94759 1503 aa17.19■□□□□ 0.34
C9orf78-205ENST00000480023 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
C9orf78-205ENST00000480023 KANK1Q14678 1352 aa17.19■□□□□ 0.34
C9orf78-205ENST00000480023 ESPNB1AK53 854 aa17.18■□□□□ 0.34
C9orf78-205ENST00000480023 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
C9orf78-205ENST00000480023 GZF1Q9H116 711 aaPredicted RBP17.18■□□□□ 0.34
C9orf78-205ENST00000480023 MYH16Q9H6N6 1097 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms