RNA–Protein interactions for RNA: ENST00000480007.1

CLASP1-212, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 4

Gene CLASP1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-212ENST00000480007 RABGEF1Q9UJ41 708 aa14.5□□□□□ -0.09
CLASP1-212ENST00000480007 PNMA3Q9UL41 463 aa14.5□□□□□ -0.09
CLASP1-212ENST00000480007 LSM11P83369 360 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLASP1-212ENST00000480007 TTLL12Q14166 644 aaPredicted RBP14.49□□□□□ -0.09
CLASP1-212ENST00000480007 TK2O00142 265 aa14.48□□□□□ -0.09
CLASP1-212ENST00000480007 KDM4CQ9H3R0 1056 aa14.46□□□□□ -0.09
CLASP1-212ENST00000480007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.45□□□□□ -0.1
CLASP1-212ENST00000480007 CLCN1P35523 988 aa14.45□□□□□ -0.1
CLASP1-212ENST00000480007 MDM2Q00987 491 aaPredicted RBP14.45□□□□□ -0.1
CLASP1-212ENST00000480007 TMUB1Q9BVT8 246 aa14.45□□□□□ -0.1
CLASP1-212ENST00000480007 NLRP7Q8WX94 980 aa14.44□□□□□ -0.1
CLASP1-212ENST00000480007 GPCPD1Q9NPB8 672 aa14.44□□□□□ -0.1
CLASP1-212ENST00000480007 RCCD1A6NED2 376 aa14.43□□□□□ -0.1
CLASP1-212ENST00000480007 SMAPO00193 183 aa14.43□□□□□ -0.1
CLASP1-212ENST00000480007 DNAJB2P25686 324 aa14.42□□□□□ -0.1
CLASP1-212ENST00000480007 ADGRD1Q6QNK2 874 aa14.42□□□□□ -0.1
CLASP1-212ENST00000480007 GIGYF2Q6Y7W6 1299 aaKnown RBP14.42□□□□□ -0.1
CLASP1-212ENST00000480007 REPIN1Q9BWE0 567 aaKnown RBP14.41□□□□□ -0.1
CLASP1-212ENST00000480007 NBPF3Q9H094 633 aa14.41□□□□□ -0.1
CLASP1-212ENST00000480007 SOGA1O94964 1423 aa14.41□□□□□ -0.1
CLASP1-212ENST00000480007 POTEGQ6S5H5 508 aa14.4□□□□□ -0.1
CLASP1-212ENST00000480007 SEPT9Q9UHD8 586 aaPredicted RBP14.4□□□□□ -0.1
CLASP1-212ENST00000480007 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
CLASP1-212ENST00000480007 POTEMA6NI47 508 aa14.39□□□□□ -0.11
CLASP1-212ENST00000480007 BHMG1C9JSJ3 638 aaPredicted RBP14.39□□□□□ -0.11
CLASP1-212ENST00000480007 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
CLASP1-212ENST00000480007 KRTAP3-3Q9BYR6 98 aa14.39□□□□□ -0.11
CLASP1-212ENST00000480007 KRTAP3-2Q9BYR7 98 aa14.39□□□□□ -0.11
CLASP1-212ENST00000480007 FAM98CQ17RN3 349 aaKnown RBP14.38□□□□□ -0.11
CLASP1-212ENST00000480007 TMEM134Q9H6X4 195 aa14.38□□□□□ -0.11
CLASP1-212ENST00000480007 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
CLASP1-212ENST00000480007 LAPTM4BQ86VI4 370 aa14.37□□□□□ -0.11
CLASP1-212ENST00000480007 CFTRP13569 1480 aa14.37□□□□□ -0.11
CLASP1-212ENST00000480007 ANKRD13DQ6ZTN6 518 aa14.36□□□□□ -0.11
CLASP1-212ENST00000480007 HRO43593 1189 aa14.35□□□□□ -0.11
CLASP1-212ENST00000480007 FAM217BQ9NTX9 383 aaPredicted RBP14.35□□□□□ -0.11
CLASP1-212ENST00000480007 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
CLASP1-212ENST00000480007 CC2D2AQ9P2K1 1620 aa14.34□□□□□ -0.11
CLASP1-212ENST00000480007 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
CLASP1-212ENST00000480007 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
CLASP1-212ENST00000480007 MS4A1P11836 297 aa14.33□□□□□ -0.12
CLASP1-212ENST00000480007 TNIKQ9UKE5 1360 aa14.33□□□□□ -0.12
CLASP1-212ENST00000480007 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
CLASP1-212ENST00000480007 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
CLASP1-212ENST00000480007 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
CLASP1-212ENST00000480007 DDRGK1Q96HY6 314 aa14.31□□□□□ -0.12
CLASP1-212ENST00000480007 FAM117AQ9C073 453 aa14.31□□□□□ -0.12
CLASP1-212ENST00000480007 SSTR3P32745 418 aaPredicted RBP14.3□□□□□ -0.12
CLASP1-212ENST00000480007 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
CLASP1-212ENST00000480007 SWT1Q5T5J6 900 aaKnown RBP14.28□□□□□ -0.12
CLASP1-212ENST00000480007 SULF1Q8IWU6 871 aa14.28□□□□□ -0.12
CLASP1-212ENST00000480007 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
CLASP1-212ENST00000480007 GOLGA3Q08378 1498 aa14.27□□□□□ -0.12
CLASP1-212ENST00000480007 ZFRQ96KR1 1074 aaKnown RBP14.27□□□□□ -0.13
CLASP1-212ENST00000480007 PRDM2Q13029 1718 aa14.26□□□□□ -0.13
CLASP1-212ENST00000480007 PLEKHG3A1L390 1219 aa14.25□□□□□ -0.13
CLASP1-212ENST00000480007 HRCP23327 699 aa14.25□□□□□ -0.13
CLASP1-212ENST00000480007 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
CLASP1-212ENST00000480007 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
CLASP1-212ENST00000480007 STAC3Q96MF2 364 aa14.25□□□□□ -0.13
CLASP1-212ENST00000480007 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
CLASP1-212ENST00000480007 KIF21BO75037 1637 aa14.24□□□□□ -0.13
CLASP1-212ENST00000480007 DDX11L8A8MPP1 907 aa14.24□□□□□ -0.13
CLASP1-212ENST00000480007 UBTFP17480 764 aaKnown RBP14.24□□□□□ -0.13
CLASP1-212ENST00000480007 SAMD7Q7Z3H4 446 aa14.24□□□□□ -0.13
CLASP1-212ENST00000480007 CD46P15529 392 aa14.23□□□□□ -0.13
CLASP1-212ENST00000480007 BEGAINQ9BUH8 593 aa14.23□□□□□ -0.13
CLASP1-212ENST00000480007 CUX1P39880 1505 aa14.22□□□□□ -0.13
CLASP1-212ENST00000480007 CEP162Q5TB80 1403 aa14.22□□□□□ -0.13
CLASP1-212ENST00000480007 SLC4A3P48751 1232 aa14.21□□□□□ -0.13
CLASP1-212ENST00000480007 SLF2Q8IX21 1173 aa14.21□□□□□ -0.13
CLASP1-212ENST00000480007 GOLGA8CPA6NN73 597 aa14.19□□□□□ -0.14
CLASP1-212ENST00000480007 RDH13Q8NBN7 331 aa14.19□□□□□ -0.14
CLASP1-212ENST00000480007 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
CLASP1-212ENST00000480007 RSPH4AQ5TD94 716 aa14.18□□□□□ -0.14
CLASP1-212ENST00000480007 ANKK1Q8NFD2 765 aa14.18□□□□□ -0.14
CLASP1-212ENST00000480007 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.17□□□□□ -0.14
CLASP1-212ENST00000480007 SLC10A3P09131 477 aa14.16□□□□□ -0.14
CLASP1-212ENST00000480007 RNF40O75150 1001 aa14.15□□□□□ -0.14
CLASP1-212ENST00000480007 SOWAHBA6NEL2 793 aa14.14□□□□□ -0.15
CLASP1-212ENST00000480007 WNT2BQ93097 391 aa14.14□□□□□ -0.15
CLASP1-212ENST00000480007 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
CLASP1-212ENST00000480007 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
CLASP1-212ENST00000480007 GOPCQ9HD26 462 aa14.12□□□□□ -0.15
CLASP1-212ENST00000480007 PCDH10Q9P2E7 1040 aa14.12□□□□□ -0.15
CLASP1-212ENST00000480007 GCGRP47871 477 aa14.11□□□□□ -0.15
CLASP1-212ENST00000480007 SH3D19Q5HYK7 790 aa14.11□□□□□ -0.15
CLASP1-212ENST00000480007 RSPH6AQ9H0K4 717 aa14.11□□□□□ -0.15
CLASP1-212ENST00000480007 BCAMP50895 628 aa14.1□□□□□ -0.15
CLASP1-212ENST00000480007 DIXDC1Q155Q3 683 aa14.1□□□□□ -0.15
CLASP1-212ENST00000480007 TBC1D2Q9BYX2 928 aa14.1□□□□□ -0.15
CLASP1-212ENST00000480007 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
CLASP1-212ENST00000480007 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
CLASP1-212ENST00000480007 CFHP08603 1231 aa14.09□□□□□ -0.15
CLASP1-212ENST00000480007 PRXQ9BXM0 1461 aa14.09□□□□□ -0.15
CLASP1-212ENST00000480007 RAPGEF2Q9Y4G8 1499 aa14.09□□□□□ -0.15
CLASP1-212ENST00000480007 NUTM1Q86Y26 1132 aa14.08□□□□□ -0.16
CLASP1-212ENST00000480007 SPIRE2Q8WWL2 714 aa14.08□□□□□ -0.16
CLASP1-212ENST00000480007 MYSM1Q5VVJ2 828 aa14.07□□□□□ -0.16
CLASP1-212ENST00000480007 CLIP1P30622 1438 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms