RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 RIMS2Q9UQ26 1411 aa15.9■□□□□ 0.14
ATG4B-219ENST00000479941 KIF1BO60333 1816 aa15.89■□□□□ 0.13
ATG4B-219ENST00000479941 MYO5BQ9ULV0 1848 aa15.89■□□□□ 0.13
ATG4B-219ENST00000479941 ANKRD30BQ9BXX2 1392 aa15.89■□□□□ 0.13
ATG4B-219ENST00000479941 PPP1R15AO75807 674 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-219ENST00000479941 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
ATG4B-219ENST00000479941 RPGRIP1LQ68CZ1 1315 aa15.86■□□□□ 0.13
ATG4B-219ENST00000479941 IQGAP1P46940 1657 aa15.86■□□□□ 0.13
ATG4B-219ENST00000479941 PLEKHG1Q9ULL1 1385 aa15.85■□□□□ 0.13
ATG4B-219ENST00000479941 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
ATG4B-219ENST00000479941 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-219ENST00000479941 BCANQ96GW7 911 aa15.83■□□□□ 0.12
ATG4B-219ENST00000479941 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-219ENST00000479941 NEXMIFQ5QGS0 1516 aa15.82■□□□□ 0.12
ATG4B-219ENST00000479941 RGL3Q3MIN7 710 aa15.81■□□□□ 0.12
ATG4B-219ENST00000479941 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
ATG4B-219ENST00000479941 ZNF335Q9H4Z2 1342 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-219ENST00000479941 SLC26A8Q96RN1 970 aa15.79■□□□□ 0.12
ATG4B-219ENST00000479941 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
ATG4B-219ENST00000479941 LTBP4Q8N2S1 1624 aa15.77■□□□□ 0.12
ATG4B-219ENST00000479941 ADAMTS13Q76LX8 1427 aa15.77■□□□□ 0.11
ATG4B-219ENST00000479941 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-219ENST00000479941 PPLO60437 1756 aa15.76■□□□□ 0.11
ATG4B-219ENST00000479941 DIP2AQ14689 1571 aa15.75■□□□□ 0.11
ATG4B-219ENST00000479941 SETBP1Q9Y6X0 1596 aa15.75■□□□□ 0.11
ATG4B-219ENST00000479941 CPS1P31327 1500 aa15.74■□□□□ 0.11
ATG4B-219ENST00000479941 KCNA6P17658 529 aa15.74■□□□□ 0.11
ATG4B-219ENST00000479941 CERKQ8TCT0 537 aa15.74■□□□□ 0.11
ATG4B-219ENST00000479941 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
ATG4B-219ENST00000479941 PIK3R4Q99570 1358 aa15.74■□□□□ 0.11
ATG4B-219ENST00000479941 ADGRF5Q8IZF2 1346 aa15.72■□□□□ 0.11
ATG4B-219ENST00000479941 IFT172Q9UG01 1749 aa15.72■□□□□ 0.11
ATG4B-219ENST00000479941 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
ATG4B-219ENST00000479941 MYOM2P54296 1465 aa15.71■□□□□ 0.1
ATG4B-219ENST00000479941 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
ATG4B-219ENST00000479941 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
ATG4B-219ENST00000479941 IQSEC2Q5JU85 1478 aa15.7■□□□□ 0.1
ATG4B-219ENST00000479941 NRXN1Q9ULB1 1477 aa15.69■□□□□ 0.1
ATG4B-219ENST00000479941 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
ATG4B-219ENST00000479941 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
ATG4B-219ENST00000479941 NWD1Q149M9 1564 aa15.68■□□□□ 0.1
ATG4B-219ENST00000479941 METP08581 1390 aa15.68■□□□□ 0.1
ATG4B-219ENST00000479941 NKTRP30414 1462 aaKnown RBP15.67■□□□□ 0.1
ATG4B-219ENST00000479941 CHD2O14647 1828 aaKnown RBP15.67■□□□□ 0.1
ATG4B-219ENST00000479941 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
ATG4B-219ENST00000479941 AMOTL2Q9Y2J4 779 aa15.67■□□□□ 0.1
ATG4B-219ENST00000479941 KDM2AQ9Y2K7 1162 aa15.67■□□□□ 0.1
ATG4B-219ENST00000479941 ALKQ9UM73 1620 aa15.67■□□□□ 0.1
ATG4B-219ENST00000479941 LRRC7Q96NW7 1537 aa15.66■□□□□ 0.1
ATG4B-219ENST00000479941 PROSER2Q86WR7 435 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-219ENST00000479941 C14orf93Q9H972 538 aaKnown RBP15.65■□□□□ 0.1
ATG4B-219ENST00000479941 PTPRUQ92729 1446 aa15.64■□□□□ 0.09
ATG4B-219ENST00000479941 CLSPNQ9HAW4 1339 aa15.64■□□□□ 0.09
ATG4B-219ENST00000479941 SETD1AO15047 1707 aaKnown RBP15.63■□□□□ 0.09
ATG4B-219ENST00000479941 L3MBTL2Q969R5 705 aa15.63■□□□□ 0.09
ATG4B-219ENST00000479941 TMEM94Q12767 1356 aa15.62■□□□□ 0.09
ATG4B-219ENST00000479941 CFAP70Q5T0N1 1121 aa15.62■□□□□ 0.09
ATG4B-219ENST00000479941 NCOA3Q9Y6Q9 1424 aa15.61■□□□□ 0.09
ATG4B-219ENST00000479941 LAMC1P11047 1609 aa15.61■□□□□ 0.09
ATG4B-219ENST00000479941 XRN1Q8IZH2 1706 aaKnown RBP15.6■□□□□ 0.09
ATG4B-219ENST00000479941 FBXO41Q8TF61 875 aa15.6■□□□□ 0.09
ATG4B-219ENST00000479941 TONSLQ96HA7 1378 aa15.6■□□□□ 0.09
ATG4B-219ENST00000479941 PRAG1Q86YV5 1406 aa15.6■□□□□ 0.09
ATG4B-219ENST00000479941 TMEM132EQ6IEE7 984 aa15.59■□□□□ 0.09
ATG4B-219ENST00000479941 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
ATG4B-219ENST00000479941 CCER1Q8TC90 406 aaPredicted RBP15.58■□□□□ 0.08
ATG4B-219ENST00000479941 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.08
ATG4B-219ENST00000479941 LRPPRCP42704 1394 aaKnown RBP15.58■□□□□ 0.08
ATG4B-219ENST00000479941 UBAP1LF5GYI3 381 aa15.57■□□□□ 0.08
ATG4B-219ENST00000479941 TOM1O60784 492 aa15.57■□□□□ 0.08
ATG4B-219ENST00000479941 ABCC11Q96J66 1382 aa15.57■□□□□ 0.08
ATG4B-219ENST00000479941 YTHDC2Q9H6S0 1430 aaKnown RBP15.57■□□□□ 0.08
ATG4B-219ENST00000479941 ASXL1Q8IXJ9 1541 aa15.57■□□□□ 0.08
ATG4B-219ENST00000479941 TECPR2O15040 1411 aa15.56■□□□□ 0.08
ATG4B-219ENST00000479941 XIRP1Q702N8 1843 aaKnown RBP15.56■□□□□ 0.08
ATG4B-219ENST00000479941 MSH6P52701 1360 aa15.55■□□□□ 0.08
ATG4B-219ENST00000479941 C14orf37Q86TY3 774 aa15.55■□□□□ 0.08
ATG4B-219ENST00000479941 STK26Q9P289 416 aa15.55■□□□□ 0.08
ATG4B-219ENST00000479941 ADGRB1O14514 1584 aa15.54■□□□□ 0.08
ATG4B-219ENST00000479941 ROBO2Q9HCK4 1378 aa15.54■□□□□ 0.08
ATG4B-219ENST00000479941 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
ATG4B-219ENST00000479941 C19orf44Q9H6X5 657 aa15.54■□□□□ 0.08
ATG4B-219ENST00000479941 TIMELESSQ9UNS1 1208 aa15.54■□□□□ 0.08
ATG4B-219ENST00000479941 KIAA1210Q9ULL0 1709 aa15.53■□□□□ 0.08
ATG4B-219ENST00000479941 FAM135BQ49AJ0 1406 aa15.51■□□□□ 0.07
ATG4B-219ENST00000479941 KNDC1Q76NI1 1749 aa15.51■□□□□ 0.07
ATG4B-219ENST00000479941 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
ATG4B-219ENST00000479941 ATF3P18847 181 aa15.5■□□□□ 0.07
ATG4B-219ENST00000479941 CADPS2Q86UW7 1296 aa15.5■□□□□ 0.07
ATG4B-219ENST00000479941 DCCP43146 1447 aa15.5■□□□□ 0.07
ATG4B-219ENST00000479941 DLC1Q96QB1 1528 aa15.49■□□□□ 0.07
ATG4B-219ENST00000479941 NBPF1Q3BBV0 1214 aa15.49■□□□□ 0.07
ATG4B-219ENST00000479941 WAPLQ7Z5K2 1190 aa15.49■□□□□ 0.07
ATG4B-219ENST00000479941 ILDR1Q86SU0 546 aaPredicted RBP15.49■□□□□ 0.07
ATG4B-219ENST00000479941 TRAK1Q9UPV9 953 aa15.49■□□□□ 0.07
ATG4B-219ENST00000479941 NBPF8Q3BBV2 869 aa15.48■□□□□ 0.07
ATG4B-219ENST00000479941 PIP4K2BP78356 416 aa15.47■□□□□ 0.07
ATG4B-219ENST00000479941 PRAM1Q96QH2 718 aa15.47■□□□□ 0.07
ATG4B-219ENST00000479941 POGKQ9P215 609 aa15.47■□□□□ 0.07
ATG4B-219ENST00000479941 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms