RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-222ENST00000479739 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
SH3YL1-222ENST00000479739 SLIT1O75093 1534 aa12.66□□□□□ -0.38
SH3YL1-222ENST00000479739 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
SH3YL1-222ENST00000479739 TONSLQ96HA7 1378 aa12.66□□□□□ -0.38
SH3YL1-222ENST00000479739 MED14O60244 1454 aa12.66□□□□□ -0.38
SH3YL1-222ENST00000479739 IDI1Q13907 227 aa12.65□□□□□ -0.38
SH3YL1-222ENST00000479739 ADGRB3O60242 1522 aa12.65□□□□□ -0.38
SH3YL1-222ENST00000479739 SLC52A1Q9NWF4 448 aa12.64□□□□□ -0.39
SH3YL1-222ENST00000479739 SPHKAPQ2M3C7 1700 aa12.63□□□□□ -0.39
SH3YL1-222ENST00000479739 ANKLE2Q86XL3 938 aa12.62□□□□□ -0.39
SH3YL1-222ENST00000479739 TMEM131LA2VDJ0 1609 aa12.62□□□□□ -0.39
SH3YL1-222ENST00000479739 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
SH3YL1-222ENST00000479739 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
SH3YL1-222ENST00000479739 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
SH3YL1-222ENST00000479739 TMEM2Q9UHN6 1383 aa12.61□□□□□ -0.39
SH3YL1-222ENST00000479739 SCAF11Q99590 1463 aaKnown RBP12.61□□□□□ -0.39
SH3YL1-222ENST00000479739 BCANQ96GW7 911 aa12.6□□□□□ -0.39
SH3YL1-222ENST00000479739 NPHP4O75161 1426 aaPredicted RBP12.6□□□□□ -0.39
SH3YL1-222ENST00000479739 TRPM2O94759 1503 aa12.59□□□□□ -0.39
SH3YL1-222ENST00000479739 LTKP29376 864 aa12.59□□□□□ -0.39
SH3YL1-222ENST00000479739 ERICH6BQ5W0A0 696 aa12.58□□□□□ -0.4
SH3YL1-222ENST00000479739 RBM19Q9Y4C8 960 aaKnown RBP12.58□□□□□ -0.4
SH3YL1-222ENST00000479739 ZFYVE9O95405 1425 aa12.58□□□□□ -0.4
SH3YL1-222ENST00000479739 TRIM52Q96A61 297 aa12.57□□□□□ -0.4
SH3YL1-222ENST00000479739 CLTCL1P53675 1640 aa12.57□□□□□ -0.4
SH3YL1-222ENST00000479739 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
SH3YL1-222ENST00000479739 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
SH3YL1-222ENST00000479739 TXNDC2Q86VQ3 553 aa12.56□□□□□ -0.4
SH3YL1-222ENST00000479739 CERKQ8TCT0 537 aa12.56□□□□□ -0.4
SH3YL1-222ENST00000479739 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
SH3YL1-222ENST00000479739 EID1Q9Y6B2 187 aa12.54□□□□□ -0.4
SH3YL1-222ENST00000479739 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
SH3YL1-222ENST00000479739 STRCP1A6NGW2 1772 aa12.53□□□□□ -0.4
SH3YL1-222ENST00000479739 RIMS2Q9UQ26 1411 aa12.53□□□□□ -0.4
SH3YL1-222ENST00000479739 KIF1BO60333 1816 aa12.52□□□□□ -0.4
SH3YL1-222ENST00000479739 MPHOSPH9Q99550 1183 aa12.52□□□□□ -0.41
SH3YL1-222ENST00000479739 CPS1P31327 1500 aa12.51□□□□□ -0.41
SH3YL1-222ENST00000479739 ILDR1Q86SU0 546 aaPredicted RBP12.51□□□□□ -0.41
SH3YL1-222ENST00000479739 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
SH3YL1-222ENST00000479739 PLEKHG1Q9ULL1 1385 aa12.5□□□□□ -0.41
SH3YL1-222ENST00000479739 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
SH3YL1-222ENST00000479739 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
SH3YL1-222ENST00000479739 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
SH3YL1-222ENST00000479739 FOXD1Q16676 465 aa12.49□□□□□ -0.41
SH3YL1-222ENST00000479739 NEXMIFQ5QGS0 1516 aa12.49□□□□□ -0.41
SH3YL1-222ENST00000479739 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.48□□□□□ -0.41
SH3YL1-222ENST00000479739 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
SH3YL1-222ENST00000479739 NWD1Q149M9 1564 aa12.46□□□□□ -0.41
SH3YL1-222ENST00000479739 ADAMTS13Q76LX8 1427 aa12.46□□□□□ -0.41
SH3YL1-222ENST00000479739 HNRNPUQ00839 825 aaKnown RBP eCLIP12.46□□□□□ -0.41
SH3YL1-222ENST00000479739 NRXN3Q9Y4C0 1643 aa12.46□□□□□ -0.41
SH3YL1-222ENST00000479739 DIP2AQ14689 1571 aa12.46□□□□□ -0.41
SH3YL1-222ENST00000479739 LRRC7Q96NW7 1537 aa12.46□□□□□ -0.42
SH3YL1-222ENST00000479739 SETBP1Q9Y6X0 1596 aa12.46□□□□□ -0.42
SH3YL1-222ENST00000479739 SLC26A8Q96RN1 970 aa12.45□□□□□ -0.42
SH3YL1-222ENST00000479739 CHD2O14647 1828 aaKnown RBP12.45□□□□□ -0.42
SH3YL1-222ENST00000479739 CCDC144AA2RUR9 1427 aa12.45□□□□□ -0.42
SH3YL1-222ENST00000479739 XIRP1Q702N8 1843 aaKnown RBP12.45□□□□□ -0.42
SH3YL1-222ENST00000479739 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
SH3YL1-222ENST00000479739 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
SH3YL1-222ENST00000479739 PPLO60437 1756 aa12.44□□□□□ -0.42
SH3YL1-222ENST00000479739 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
SH3YL1-222ENST00000479739 TBX22Q9Y458 520 aa12.43□□□□□ -0.42
SH3YL1-222ENST00000479739 IFT172Q9UG01 1749 aa12.43□□□□□ -0.42
SH3YL1-222ENST00000479739 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
SH3YL1-222ENST00000479739 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
SH3YL1-222ENST00000479739 NKTRP30414 1462 aaKnown RBP12.42□□□□□ -0.42
SH3YL1-222ENST00000479739 HSPA5P11021 654 aaKnown RBP12.42□□□□□ -0.42
SH3YL1-222ENST00000479739 KCNA6P17658 529 aa12.42□□□□□ -0.42
SH3YL1-222ENST00000479739 PPP4R2Q9NY27 417 aa12.42□□□□□ -0.42
SH3YL1-222ENST00000479739 PIK3R4Q99570 1358 aa12.41□□□□□ -0.42
SH3YL1-222ENST00000479739 ANKRD30BQ9BXX2 1392 aa12.41□□□□□ -0.42
SH3YL1-222ENST00000479739 RPGRIP1LQ68CZ1 1315 aa12.41□□□□□ -0.42
SH3YL1-222ENST00000479739 ALKQ9UM73 1620 aa12.41□□□□□ -0.42
SH3YL1-222ENST00000479739 SETD1AO15047 1707 aaKnown RBP12.41□□□□□ -0.42
SH3YL1-222ENST00000479739 SENP3Q9H4L4 574 aaPredicted RBP12.39□□□□□ -0.43
SH3YL1-222ENST00000479739 XRN1Q8IZH2 1706 aaKnown RBP12.38□□□□□ -0.43
SH3YL1-222ENST00000479739 PTPRUQ92729 1446 aa12.38□□□□□ -0.43
SH3YL1-222ENST00000479739 ZBED9Q6R2W3 1325 aa12.38□□□□□ -0.43
SH3YL1-222ENST00000479739 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
SH3YL1-222ENST00000479739 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
SH3YL1-222ENST00000479739 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
SH3YL1-222ENST00000479739 TMEM94Q12767 1356 aa12.36□□□□□ -0.43
SH3YL1-222ENST00000479739 UBAP1LF5GYI3 381 aa12.36□□□□□ -0.43
SH3YL1-222ENST00000479739 METP08581 1390 aa12.36□□□□□ -0.43
SH3YL1-222ENST00000479739 MSH5O43196 834 aa12.35□□□□□ -0.43
SH3YL1-222ENST00000479739 PRKRIP1Q9H875 184 aaPredicted RBP12.35□□□□□ -0.43
SH3YL1-222ENST00000479739 RGL3Q3MIN7 710 aa12.35□□□□□ -0.43
SH3YL1-222ENST00000479739 NRXN1Q9ULB1 1477 aa12.34□□□□□ -0.43
SH3YL1-222ENST00000479739 PROSER2Q86WR7 435 aaPredicted RBP12.34□□□□□ -0.43
SH3YL1-222ENST00000479739 PIK3C2GO75747 1445 aa12.34□□□□□ -0.43
SH3YL1-222ENST00000479739 PRAG1Q86YV5 1406 aa12.34□□□□□ -0.43
SH3YL1-222ENST00000479739 NCOA3Q9Y6Q9 1424 aa12.34□□□□□ -0.43
SH3YL1-222ENST00000479739 ADGRF5Q8IZF2 1346 aa12.34□□□□□ -0.43
SH3YL1-222ENST00000479739 MYOM2P54296 1465 aa12.33□□□□□ -0.44
SH3YL1-222ENST00000479739 TOM1O60784 492 aa12.33□□□□□ -0.44
SH3YL1-222ENST00000479739 AMOTL2Q9Y2J4 779 aa12.33□□□□□ -0.44
SH3YL1-222ENST00000479739 RBM33Q96EV2 1170 aaKnown RBP12.31□□□□□ -0.44
SH3YL1-222ENST00000479739 L3MBTL2Q969R5 705 aa12.31□□□□□ -0.44
SH3YL1-222ENST00000479739 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms