RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
SF3B1-209ENST00000479532 RABGEF1Q9UJ41 708 aa9.98□□□□□ -0.81
SF3B1-209ENST00000479532 SOWAHBA6NEL2 793 aa9.97□□□□□ -0.81
SF3B1-209ENST00000479532 UBTFP17480 764 aaKnown RBP9.97□□□□□ -0.81
SF3B1-209ENST00000479532 ADAM33Q9BZ11 813 aa9.97□□□□□ -0.81
SF3B1-209ENST00000479532 SHROOM2Q13796 1616 aa9.96□□□□□ -0.81
SF3B1-209ENST00000479532 PRKCSHP14314 528 aaPredicted RBP9.96□□□□□ -0.82
SF3B1-209ENST00000479532 WBP1LQ9NX94 342 aa9.96□□□□□ -0.82
SF3B1-209ENST00000479532 NRG2O14511 850 aaPredicted RBP9.95□□□□□ -0.82
SF3B1-209ENST00000479532 CARMIL2Q6F5E8 1435 aa9.93□□□□□ -0.82
SF3B1-209ENST00000479532 NBR1Q14596 966 aa9.93□□□□□ -0.82
SF3B1-209ENST00000479532 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
SF3B1-209ENST00000479532 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
SF3B1-209ENST00000479532 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
SF3B1-209ENST00000479532 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
SF3B1-209ENST00000479532 ARHGEF11O15085 1522 aa9.92□□□□□ -0.82
SF3B1-209ENST00000479532 PRG4Q92954 1404 aaPredicted RBP9.92□□□□□ -0.82
SF3B1-209ENST00000479532 PROX2Q3B8N5 592 aa9.92□□□□□ -0.82
SF3B1-209ENST00000479532 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
SF3B1-209ENST00000479532 UGGT2Q9NYU1 1516 aa9.92□□□□□ -0.82
SF3B1-209ENST00000479532 PPP1R3GB7ZBB8 358 aa9.91□□□□□ -0.82
SF3B1-209ENST00000479532 EVI5O60447 810 aa9.91□□□□□ -0.82
SF3B1-209ENST00000479532 ZNF775Q96BV0 537 aaPredicted RBP9.91□□□□□ -0.82
SF3B1-209ENST00000479532 ZFRQ96KR1 1074 aaKnown RBP9.91□□□□□ -0.82
SF3B1-209ENST00000479532 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
SF3B1-209ENST00000479532 TPRNQ4KMQ1 711 aa9.89□□□□□ -0.83
SF3B1-209ENST00000479532 EFCAB5A4FU69 1503 aa9.88□□□□□ -0.83
SF3B1-209ENST00000479532 KIAA1468Q9P260 1216 aa9.88□□□□□ -0.83
SF3B1-209ENST00000479532 KIAA0556O60303 1618 aa9.88□□□□□ -0.83
SF3B1-209ENST00000479532 TNIKQ9UKE5 1360 aa9.88□□□□□ -0.83
SF3B1-209ENST00000479532 PPP1R15BQ5SWA1 713 aa9.87□□□□□ -0.83
SF3B1-209ENST00000479532 RANGAP1P46060 587 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-209ENST00000479532 ERCC6L2Q5T890 1561 aa9.86□□□□□ -0.83
SF3B1-209ENST00000479532 TSR3Q9UJK0 312 aaKnown RBP9.86□□□□□ -0.83
SF3B1-209ENST00000479532 SAMD9Q5K651 1589 aa9.85□□□□□ -0.83
SF3B1-209ENST00000479532 DISP1Q96F81 1524 aa9.85□□□□□ -0.83
SF3B1-209ENST00000479532 COL9A1P20849 921 aa9.84□□□□□ -0.83
SF3B1-209ENST00000479532 CADPS2Q86UW7 1296 aa9.84□□□□□ -0.83
SF3B1-209ENST00000479532 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
SF3B1-209ENST00000479532 ARAP1Q96P48 1450 aa9.84□□□□□ -0.83
SF3B1-209ENST00000479532 PTPRGP23470 1445 aa9.83□□□□□ -0.84
SF3B1-209ENST00000479532 MAP3K9P80192 1104 aa9.83□□□□□ -0.84
SF3B1-209ENST00000479532 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
SF3B1-209ENST00000479532 PDZRN3Q9UPQ7 1066 aa9.83□□□□□ -0.84
SF3B1-209ENST00000479532 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
SF3B1-209ENST00000479532 LOC105371045A0A1W2PR82 267 aa9.82□□□□□ -0.84
SF3B1-209ENST00000479532 CYB5RLQ6IPT4 315 aa9.82□□□□□ -0.84
SF3B1-209ENST00000479532 LRCH3Q96II8 777 aa9.82□□□□□ -0.84
SF3B1-209ENST00000479532 SEPT9Q9UHD8 586 aaPredicted RBP9.82□□□□□ -0.84
SF3B1-209ENST00000479532 V9GY48 417 aaPredicted RBP9.82□□□□□ -0.84
SF3B1-209ENST00000479532 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
SF3B1-209ENST00000479532 CLIP1P30622 1438 aa9.81□□□□□ -0.84
SF3B1-209ENST00000479532 CEP162Q5TB80 1403 aa9.8□□□□□ -0.84
SF3B1-209ENST00000479532 PCDHGA10Q9Y5H3 936 aa9.79□□□□□ -0.84
SF3B1-209ENST00000479532 FHOD3Q2V2M9 1422 aa9.79□□□□□ -0.84
SF3B1-209ENST00000479532 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
SF3B1-209ENST00000479532 ONECUT3O60422 494 aaPredicted RBP9.78□□□□□ -0.84
SF3B1-209ENST00000479532 PDE4AP27815 886 aa9.78□□□□□ -0.84
SF3B1-209ENST00000479532 FBXW7Q969H0 707 aa9.78□□□□□ -0.84
SF3B1-209ENST00000479532 CRISPLD2Q9H0B8 497 aa9.78□□□□□ -0.84
SF3B1-209ENST00000479532 WDR70Q9NW82 654 aa9.78□□□□□ -0.84
SF3B1-209ENST00000479532 FMN1Q68DA7 1419 aa9.78□□□□□ -0.84
SF3B1-209ENST00000479532 UACAQ9BZF9 1416 aa9.77□□□□□ -0.85
SF3B1-209ENST00000479532 PPP4CP60510 307 aa9.77□□□□□ -0.85
SF3B1-209ENST00000479532 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
SF3B1-209ENST00000479532 RAPGEF6Q8TEU7 1601 aa9.76□□□□□ -0.85
SF3B1-209ENST00000479532 TYW1BQ6NUM6 668 aa9.76□□□□□ -0.85
SF3B1-209ENST00000479532 PPP1R18Q6NYC8 613 aa9.76□□□□□ -0.85
SF3B1-209ENST00000479532 ABCC2Q92887 1545 aa9.76□□□□□ -0.85
SF3B1-209ENST00000479532 UHRF1BP1LA0JNW5 1464 aa9.75□□□□□ -0.85
SF3B1-209ENST00000479532 ABCA8O94911 1581 aa9.75□□□□□ -0.85
SF3B1-209ENST00000479532 ADCY10Q96PN6 1610 aa9.74□□□□□ -0.85
SF3B1-209ENST00000479532 PLB1Q6P1J6 1458 aa9.73□□□□□ -0.85
SF3B1-209ENST00000479532 MYT1Q01538 1121 aa9.73□□□□□ -0.85
SF3B1-209ENST00000479532 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
SF3B1-209ENST00000479532 HECW1Q76N89 1606 aa9.73□□□□□ -0.85
SF3B1-209ENST00000479532 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
SF3B1-209ENST00000479532 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.72□□□□□ -0.85
SF3B1-209ENST00000479532 ATP1B4Q9UN42 357 aaPredicted RBP9.71□□□□□ -0.86
SF3B1-209ENST00000479532 TRIM6-TRIM34B2RNG4 842 aa9.7□□□□□ -0.86
SF3B1-209ENST00000479532 PHF14O94880 888 aa9.7□□□□□ -0.86
SF3B1-209ENST00000479532 IL21Q9HBE4 155 aa9.7□□□□□ -0.86
SF3B1-209ENST00000479532 FYCO1Q9BQS8 1478 aa9.7□□□□□ -0.86
SF3B1-209ENST00000479532 ZCCHC11Q5TAX3 1644 aaKnown RBP9.7□□□□□ -0.86
SF3B1-209ENST00000479532 PCF11O94913 1555 aaKnown RBP9.69□□□□□ -0.86
SF3B1-209ENST00000479532 C6orf132Q5T0Z8 1188 aa9.69□□□□□ -0.86
SF3B1-209ENST00000479532 CASKIN1Q8WXD9 1431 aa9.69□□□□□ -0.86
SF3B1-209ENST00000479532 KDM5BQ9UGL1 1544 aa9.69□□□□□ -0.86
SF3B1-209ENST00000479532 CCDC18Q5T9S5 1454 aa9.68□□□□□ -0.86
SF3B1-209ENST00000479532 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
SF3B1-209ENST00000479532 MAPKBP1O60336 1514 aa9.67□□□□□ -0.86
SF3B1-209ENST00000479532 NUP153P49790 1475 aaKnown RBP9.67□□□□□ -0.86
SF3B1-209ENST00000479532 VPS8Q8N3P4 1428 aa9.67□□□□□ -0.86
SF3B1-209ENST00000479532 MTRQ99707 1265 aa9.67□□□□□ -0.86
SF3B1-209ENST00000479532 NCKAP5LQ9HCH0 1330 aa9.66□□□□□ -0.86
SF3B1-209ENST00000479532 GGCXP38435 758 aa9.66□□□□□ -0.86
SF3B1-209ENST00000479532 PACS2Q86VP3 889 aa9.66□□□□□ -0.86
SF3B1-209ENST00000479532 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
SF3B1-209ENST00000479532 CDK11AQ9UQ88 783 aaPredicted RBP9.66□□□□□ -0.86
SF3B1-209ENST00000479532 ARID3CA6NKF2 412 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms