RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
PCIF1-202ENST00000479348 LTKP29376 864 aa20.44■□□□□ 0.86
PCIF1-202ENST00000479348 POLR1AO95602 1720 aaPredicted RBP20.43■□□□□ 0.86
PCIF1-202ENST00000479348 NEURL4Q96JN8 1562 aa20.43■□□□□ 0.86
PCIF1-202ENST00000479348 MYO5BQ9ULV0 1848 aa20.43■□□□□ 0.86
PCIF1-202ENST00000479348 ZNF326Q5BKZ1 582 aaKnown RBP20.43■□□□□ 0.86
PCIF1-202ENST00000479348 RPGRIP1LQ68CZ1 1315 aa20.43■□□□□ 0.86
PCIF1-202ENST00000479348 NPHP4O75161 1426 aaPredicted RBP20.41■□□□□ 0.86
PCIF1-202ENST00000479348 SPATA31E1Q6ZUB1 1445 aa20.41■□□□□ 0.86
PCIF1-202ENST00000479348 PPP1R15AO75807 674 aaPredicted RBP20.39■□□□□ 0.85
PCIF1-202ENST00000479348 PLEKHG1Q9ULL1 1385 aa20.37■□□□□ 0.85
PCIF1-202ENST00000479348 VGFO15240 615 aaPredicted RBP20.36■□□□□ 0.85
PCIF1-202ENST00000479348 NEXMIFQ5QGS0 1516 aa20.35■□□□□ 0.85
PCIF1-202ENST00000479348 RGL3Q3MIN7 710 aa20.35■□□□□ 0.85
PCIF1-202ENST00000479348 IQGAP1P46940 1657 aa20.35■□□□□ 0.85
PCIF1-202ENST00000479348 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
PCIF1-202ENST00000479348 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
PCIF1-202ENST00000479348 BCANQ96GW7 911 aa20.31■□□□□ 0.84
PCIF1-202ENST00000479348 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
PCIF1-202ENST00000479348 PPLO60437 1756 aa20.29■□□□□ 0.84
PCIF1-202ENST00000479348 TBX22Q9Y458 520 aa20.28■□□□□ 0.84
PCIF1-202ENST00000479348 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.83
PCIF1-202ENST00000479348 DIP2AQ14689 1571 aa20.26■□□□□ 0.83
PCIF1-202ENST00000479348 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
PCIF1-202ENST00000479348 IFT172Q9UG01 1749 aa20.26■□□□□ 0.83
PCIF1-202ENST00000479348 SIN3AQ96ST3 1273 aa20.26■□□□□ 0.83
PCIF1-202ENST00000479348 MYOM2P54296 1465 aa20.25■□□□□ 0.83
PCIF1-202ENST00000479348 ADAMTS13Q76LX8 1427 aa20.24■□□□□ 0.83
PCIF1-202ENST00000479348 DCAF11Q8TEB1 546 aa20.24■□□□□ 0.83
PCIF1-202ENST00000479348 ADGRF5Q8IZF2 1346 aa20.23■□□□□ 0.83
PCIF1-202ENST00000479348 PIK3R4Q99570 1358 aa20.23■□□□□ 0.83
PCIF1-202ENST00000479348 NEUROD1Q13562 356 aa20.23■□□□□ 0.83
PCIF1-202ENST00000479348 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
PCIF1-202ENST00000479348 NRXN1Q9ULB1 1477 aa20.2■□□□□ 0.82
PCIF1-202ENST00000479348 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
PCIF1-202ENST00000479348 KCNA6P17658 529 aa20.2■□□□□ 0.82
PCIF1-202ENST00000479348 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
PCIF1-202ENST00000479348 PIK3C2GO75747 1445 aa20.19■□□□□ 0.82
PCIF1-202ENST00000479348 CCER1Q8TC90 406 aaPredicted RBP20.19■□□□□ 0.82
PCIF1-202ENST00000479348 KDM2AQ9Y2K7 1162 aa20.19■□□□□ 0.82
PCIF1-202ENST00000479348 LTBP4Q8N2S1 1624 aa20.18■□□□□ 0.82
PCIF1-202ENST00000479348 CPS1P31327 1500 aa20.18■□□□□ 0.82
PCIF1-202ENST00000479348 L3MBTL2Q969R5 705 aa20.17■□□□□ 0.82
PCIF1-202ENST00000479348 ALKQ9UM73 1620 aa20.17■□□□□ 0.82
PCIF1-202ENST00000479348 C14orf93Q9H972 538 aaKnown RBP20.15■□□□□ 0.82
PCIF1-202ENST00000479348 METP08581 1390 aa20.14■□□□□ 0.81
PCIF1-202ENST00000479348 TONSLQ96HA7 1378 aa20.14■□□□□ 0.81
PCIF1-202ENST00000479348 NWD1Q149M9 1564 aa20.13■□□□□ 0.81
PCIF1-202ENST00000479348 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
PCIF1-202ENST00000479348 LAMC1P11047 1609 aa20.12■□□□□ 0.81
PCIF1-202ENST00000479348 NKTRP30414 1462 aaKnown RBP20.12■□□□□ 0.81
PCIF1-202ENST00000479348 CERKQ8TCT0 537 aa20.12■□□□□ 0.81
PCIF1-202ENST00000479348 TIMELESSQ9UNS1 1208 aa20.12■□□□□ 0.81
PCIF1-202ENST00000479348 AMOTL2Q9Y2J4 779 aa20.11■□□□□ 0.81
PCIF1-202ENST00000479348 SETD1AO15047 1707 aaKnown RBP20.11■□□□□ 0.81
PCIF1-202ENST00000479348 CFAP70Q5T0N1 1121 aa20.1■□□□□ 0.81
PCIF1-202ENST00000479348 STRCP1A6NGW2 1772 aa20.1■□□□□ 0.81
PCIF1-202ENST00000479348 IQSEC2Q5JU85 1478 aa20.1■□□□□ 0.81
PCIF1-202ENST00000479348 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
PCIF1-202ENST00000479348 FBXO41Q8TF61 875 aa20.09■□□□□ 0.81
PCIF1-202ENST00000479348 PRAG1Q86YV5 1406 aa20.09■□□□□ 0.81
PCIF1-202ENST00000479348 PROSER2Q86WR7 435 aaPredicted RBP20.08■□□□□ 0.81
PCIF1-202ENST00000479348 LRRC7Q96NW7 1537 aa20.07■□□□□ 0.8
PCIF1-202ENST00000479348 NCOA3Q9Y6Q9 1424 aa20.06■□□□□ 0.8
PCIF1-202ENST00000479348 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
PCIF1-202ENST00000479348 LRPPRCP42704 1394 aaKnown RBP20.05■□□□□ 0.8
PCIF1-202ENST00000479348 TMEM132EQ6IEE7 984 aa20.04■□□□□ 0.8
PCIF1-202ENST00000479348 ABCC11Q96J66 1382 aa20.04■□□□□ 0.8
PCIF1-202ENST00000479348 KIAA1210Q9ULL0 1709 aa20.04■□□□□ 0.8
PCIF1-202ENST00000479348 PTCH1Q13635 1447 aa20.03■□□□□ 0.8
PCIF1-202ENST00000479348 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
PCIF1-202ENST00000479348 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
PCIF1-202ENST00000479348 TMEM94Q12767 1356 aa20.02■□□□□ 0.8
PCIF1-202ENST00000479348 TECPR2O15040 1411 aa20.02■□□□□ 0.8
PCIF1-202ENST00000479348 SIRT1Q96EB6 747 aa20.02■□□□□ 0.79
PCIF1-202ENST00000479348 ADGRB1O14514 1584 aa20■□□□□ 0.79
PCIF1-202ENST00000479348 STK26Q9P289 416 aa20■□□□□ 0.79
PCIF1-202ENST00000479348 ROBO2Q9HCK4 1378 aa19.98■□□□□ 0.79
PCIF1-202ENST00000479348 FAM135BQ49AJ0 1406 aa19.97■□□□□ 0.79
PCIF1-202ENST00000479348 KNDC1Q76NI1 1749 aa19.97■□□□□ 0.79
PCIF1-202ENST00000479348 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
PCIF1-202ENST00000479348 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
PCIF1-202ENST00000479348 C19orf44Q9H6X5 657 aa19.96■□□□□ 0.79
PCIF1-202ENST00000479348 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
PCIF1-202ENST00000479348 DLC1Q96QB1 1528 aa19.95■□□□□ 0.78
PCIF1-202ENST00000479348 MSH6P52701 1360 aa19.95■□□□□ 0.78
PCIF1-202ENST00000479348 C14orf37Q86TY3 774 aa19.95■□□□□ 0.78
PCIF1-202ENST00000479348 RBM33Q96EV2 1170 aaKnown RBP19.95■□□□□ 0.78
PCIF1-202ENST00000479348 TRPM1Q7Z4N2 1603 aa19.95■□□□□ 0.78
PCIF1-202ENST00000479348 TOM1O60784 492 aa19.93■□□□□ 0.78
PCIF1-202ENST00000479348 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
PCIF1-202ENST00000479348 ROCK2O75116 1388 aaKnown RBP19.92■□□□□ 0.78
PCIF1-202ENST00000479348 GPRASP1Q5JY77 1395 aa19.92■□□□□ 0.78
PCIF1-202ENST00000479348 DCCP43146 1447 aa19.91■□□□□ 0.78
PCIF1-202ENST00000479348 ADGRL3Q9HAR2 1447 aa19.91■□□□□ 0.78
PCIF1-202ENST00000479348 RALGAPBQ86X10 1494 aa19.91■□□□□ 0.78
PCIF1-202ENST00000479348 WAPLQ7Z5K2 1190 aa19.91■□□□□ 0.78
PCIF1-202ENST00000479348 UBAP1LF5GYI3 381 aa19.9■□□□□ 0.78
PCIF1-202ENST00000479348 CADPS2Q86UW7 1296 aa19.9■□□□□ 0.78
PCIF1-202ENST00000479348 POGKQ9P215 609 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms