RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 L3MBTL2Q969R5 705 aa26.92■■□□□ 1.9
RUNX3-204ENST00000479341 ZFYVE9O95405 1425 aa26.9■■□□□ 1.9
RUNX3-204ENST00000479341 RIMS2Q9UQ26 1411 aa26.9■■□□□ 1.9
RUNX3-204ENST00000479341 TONSLQ96HA7 1378 aa26.9■■□□□ 1.9
RUNX3-204ENST00000479341 TIMELESSQ9UNS1 1208 aa26.9■■□□□ 1.9
RUNX3-204ENST00000479341 NEXMIFQ5QGS0 1516 aa26.9■■□□□ 1.9
RUNX3-204ENST00000479341 HDGFP51858 240 aaKnown RBP26.87■■□□□ 1.89
RUNX3-204ENST00000479341 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.87■■□□□ 1.89
RUNX3-204ENST00000479341 LTKP29376 864 aa26.86■■□□□ 1.89
RUNX3-204ENST00000479341 DCAF11Q8TEB1 546 aa26.86■■□□□ 1.89
RUNX3-204ENST00000479341 STAC3Q96MF2 364 aa26.86■■□□□ 1.89
RUNX3-204ENST00000479341 TXNDC2Q86VQ3 553 aa26.85■■□□□ 1.89
RUNX3-204ENST00000479341 IFT172Q9UG01 1749 aa26.85■■□□□ 1.89
RUNX3-204ENST00000479341 PPLO60437 1756 aa26.84■■□□□ 1.89
RUNX3-204ENST00000479341 VGFO15240 615 aaPredicted RBP26.83■■□□□ 1.89
RUNX3-204ENST00000479341 NUTM2DQ5VT03 806 aaPredicted RBP26.83■■□□□ 1.89
RUNX3-204ENST00000479341 ANKLE2Q86XL3 938 aa26.83■■□□□ 1.89
RUNX3-204ENST00000479341 EID1Q9Y6B2 187 aa26.83■■□□□ 1.89
RUNX3-204ENST00000479341 KDM2AQ9Y2K7 1162 aa26.82■■□□□ 1.88
RUNX3-204ENST00000479341 MYOM2P54296 1465 aa26.81■■□□□ 1.88
RUNX3-204ENST00000479341 SCAF11Q99590 1463 aaKnown RBP26.81■■□□□ 1.88
RUNX3-204ENST00000479341 ADGRF5Q8IZF2 1346 aa26.8■■□□□ 1.88
RUNX3-204ENST00000479341 PPP1R15AO75807 674 aaPredicted RBP26.78■■□□□ 1.88
RUNX3-204ENST00000479341 CERKQ8TCT0 537 aa26.78■■□□□ 1.88
RUNX3-204ENST00000479341 NRXN1Q9ULB1 1477 aa26.77■■□□□ 1.88
RUNX3-204ENST00000479341 NCKAP5LQ9HCH0 1330 aa26.77■■□□□ 1.88
RUNX3-204ENST00000479341 PLEKHG1Q9ULL1 1385 aa26.75■■□□□ 1.87
RUNX3-204ENST00000479341 DMRT2Q9Y5R5 561 aa26.74■■□□□ 1.87
RUNX3-204ENST00000479341 MED14O60244 1454 aa26.73■■□□□ 1.87
RUNX3-204ENST00000479341 PRAG1Q86YV5 1406 aa26.73■■□□□ 1.87
RUNX3-204ENST00000479341 POLR1AO95602 1720 aaPredicted RBP26.71■■□□□ 1.87
RUNX3-204ENST00000479341 PIK3C2GO75747 1445 aa26.71■■□□□ 1.87
RUNX3-204ENST00000479341 NBPF8Q3BBV2 869 aa26.7■■□□□ 1.86
RUNX3-204ENST00000479341 STRCQ7RTU9 1775 aa26.7■■□□□ 1.86
RUNX3-204ENST00000479341 NPHP4O75161 1426 aaPredicted RBP26.7■■□□□ 1.86
RUNX3-204ENST00000479341 SETBP1Q9Y6X0 1596 aa26.68■■□□□ 1.86
RUNX3-204ENST00000479341 C14orf93Q9H972 538 aaKnown RBP26.67■■□□□ 1.86
RUNX3-204ENST00000479341 ADAMTS13Q76LX8 1427 aa26.66■■□□□ 1.86
RUNX3-204ENST00000479341 NRXN3Q9Y4C0 1643 aa26.66■■□□□ 1.86
RUNX3-204ENST00000479341 SENP3Q9H4L4 574 aaPredicted RBP26.66■■□□□ 1.86
RUNX3-204ENST00000479341 ZEB1P37275 1124 aaPredicted RBP26.65■■□□□ 1.86
RUNX3-204ENST00000479341 BCANQ96GW7 911 aa26.65■■□□□ 1.86
RUNX3-204ENST00000479341 CFAP70Q5T0N1 1121 aa26.64■■□□□ 1.86
RUNX3-204ENST00000479341 TBX22Q9Y458 520 aa26.63■■□□□ 1.85
RUNX3-204ENST00000479341 IQGAP1P46940 1657 aa26.63■■□□□ 1.85
RUNX3-204ENST00000479341 ALKQ9UM73 1620 aa26.62■■□□□ 1.85
RUNX3-204ENST00000479341 SLC26A8Q96RN1 970 aa26.62■■□□□ 1.85
RUNX3-204ENST00000479341 KIAA1210Q9ULL0 1709 aa26.58■■□□□ 1.85
RUNX3-204ENST00000479341 DIP2AQ14689 1571 aa26.58■■□□□ 1.85
RUNX3-204ENST00000479341 SETD1AO15047 1707 aaKnown RBP26.57■■□□□ 1.84
RUNX3-204ENST00000479341 NBPF1Q3BBV0 1214 aa26.57■■□□□ 1.84
RUNX3-204ENST00000479341 LAMC1P11047 1609 aa26.57■■□□□ 1.84
RUNX3-204ENST00000479341 TRPM1Q7Z4N2 1603 aa26.56■■□□□ 1.84
RUNX3-204ENST00000479341 RALGAPBQ86X10 1494 aa26.55■■□□□ 1.84
RUNX3-204ENST00000479341 METP08581 1390 aa26.55■■□□□ 1.84
RUNX3-204ENST00000479341 TMEM132EQ6IEE7 984 aa26.53■■□□□ 1.84
RUNX3-204ENST00000479341 ASXL1Q8IXJ9 1541 aa26.53■■□□□ 1.84
RUNX3-204ENST00000479341 ADGRB1O14514 1584 aa26.52■■□□□ 1.84
RUNX3-204ENST00000479341 PIK3R4Q99570 1358 aa26.52■■□□□ 1.84
RUNX3-204ENST00000479341 GPRASP1Q5JY77 1395 aa26.51■■□□□ 1.83
RUNX3-204ENST00000479341 ROCK2O75116 1388 aaKnown RBP26.49■■□□□ 1.83
RUNX3-204ENST00000479341 PTPRUQ92729 1446 aa26.48■■□□□ 1.83
RUNX3-204ENST00000479341 LRPPRCP42704 1394 aaKnown RBP26.46■■□□□ 1.83
RUNX3-204ENST00000479341 YTHDC2Q9H6S0 1430 aaKnown RBP26.46■■□□□ 1.83
RUNX3-204ENST00000479341 KCNA6P17658 529 aa26.45■■□□□ 1.82
RUNX3-204ENST00000479341 CARD11Q9BXL7 1154 aa26.44■■□□□ 1.82
RUNX3-204ENST00000479341 AMOTL2Q9Y2J4 779 aa26.44■■□□□ 1.82
RUNX3-204ENST00000479341 ABCC11Q96J66 1382 aa26.44■■□□□ 1.82
RUNX3-204ENST00000479341 CHD2O14647 1828 aaKnown RBP26.42■■□□□ 1.82
RUNX3-204ENST00000479341 STK26Q9P289 416 aa26.42■■□□□ 1.82
RUNX3-204ENST00000479341 TECPR2O15040 1411 aa26.39■■□□□ 1.82
RUNX3-204ENST00000479341 NWD1Q149M9 1564 aa26.39■■□□□ 1.82
RUNX3-204ENST00000479341 TRAK1Q9UPV9 953 aa26.39■■□□□ 1.82
RUNX3-204ENST00000479341 XRN1Q8IZH2 1706 aaKnown RBP26.39■■□□□ 1.81
RUNX3-204ENST00000479341 SIRT1Q96EB6 747 aa26.38■■□□□ 1.81
RUNX3-204ENST00000479341 ZNF335Q9H4Z2 1342 aaPredicted RBP26.38■■□□□ 1.81
RUNX3-204ENST00000479341 DLC1Q96QB1 1528 aa26.36■■□□□ 1.81
RUNX3-204ENST00000479341 KNDC1Q76NI1 1749 aa26.35■■□□□ 1.81
RUNX3-204ENST00000479341 LTBP4Q8N2S1 1624 aa26.35■■□□□ 1.81
RUNX3-204ENST00000479341 ROBO2Q9HCK4 1378 aa26.34■■□□□ 1.81
RUNX3-204ENST00000479341 STRCP1A6NGW2 1772 aa26.34■■□□□ 1.81
RUNX3-204ENST00000479341 PTCH1Q13635 1447 aa26.33■■□□□ 1.81
RUNX3-204ENST00000479341 CPS1P31327 1500 aa26.33■■□□□ 1.81
RUNX3-204ENST00000479341 FAM135BQ49AJ0 1406 aa26.32■■□□□ 1.8
RUNX3-204ENST00000479341 NKTRP30414 1462 aaKnown RBP26.31■■□□□ 1.8
RUNX3-204ENST00000479341 USP47Q96K76 1375 aa26.31■■□□□ 1.8
RUNX3-204ENST00000479341 ARHGEF28Q8N1W1 1705 aaKnown RBP26.29■■□□□ 1.8
RUNX3-204ENST00000479341 WAPLQ7Z5K2 1190 aa26.29■■□□□ 1.8
RUNX3-204ENST00000479341 PRAM1Q96QH2 718 aa26.29■■□□□ 1.8
RUNX3-204ENST00000479341 PLEKHH1Q9ULM0 1364 aa26.28■■□□□ 1.8
RUNX3-204ENST00000479341 EIF4G2P78344 907 aaKnown RBP eCLIP26.27■■□□□ 1.8
RUNX3-204ENST00000479341 PROSER2Q86WR7 435 aaPredicted RBP26.27■■□□□ 1.8
RUNX3-204ENST00000479341 EIF3AQ14152 1382 aaKnown RBP26.27■■□□□ 1.8
RUNX3-204ENST00000479341 IQSEC2Q5JU85 1478 aa26.26■■□□□ 1.79
RUNX3-204ENST00000479341 DISP3Q9P2K9 1392 aa26.26■■□□□ 1.79
RUNX3-204ENST00000479341 POGKQ9P215 609 aa26.26■■□□□ 1.79
RUNX3-204ENST00000479341 CENPJQ9HC77 1338 aaPredicted RBP26.25■■□□□ 1.79
RUNX3-204ENST00000479341 ST20-MTHFSA0A0A6YYL1 179 aa26.24■■□□□ 1.79
RUNX3-204ENST00000479341 HSPA5P11021 654 aaKnown RBP26.24■■□□□ 1.79
RUNX3-204ENST00000479341 LRRC7Q96NW7 1537 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms