RNA–Protein interactions for RNA: ENST00000479215.1

ITCH-204, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene ITCH, Length 205 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-204ENST00000479215 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
ITCH-204ENST00000479215 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
ITCH-204ENST00000479215 ATF3P18847 181 aa13.97□□□□□ -0.17
ITCH-204ENST00000479215 APLP2Q06481 763 aa13.97□□□□□ -0.17
ITCH-204ENST00000479215 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
ITCH-204ENST00000479215 TBX22Q9Y458 520 aa13.97□□□□□ -0.17
ITCH-204ENST00000479215 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
ITCH-204ENST00000479215 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.17
ITCH-204ENST00000479215 LMTK2Q8IWU2 1503 aa13.95□□□□□ -0.18
ITCH-204ENST00000479215 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
ITCH-204ENST00000479215 ABCC5O15440 1437 aa13.95□□□□□ -0.18
ITCH-204ENST00000479215 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
ITCH-204ENST00000479215 NOS1P29475 1434 aa13.94□□□□□ -0.18
ITCH-204ENST00000479215 PHLPP1O60346 1717 aa13.93□□□□□ -0.18
ITCH-204ENST00000479215 NWD1Q149M9 1564 aa13.93□□□□□ -0.18
ITCH-204ENST00000479215 FOXD1Q16676 465 aa13.93□□□□□ -0.18
ITCH-204ENST00000479215 ADGRB3O60242 1522 aa13.91□□□□□ -0.18
ITCH-204ENST00000479215 CHIC2Q9UKJ5 165 aa13.91□□□□□ -0.18
ITCH-204ENST00000479215 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
ITCH-204ENST00000479215 DAPK1P53355 1430 aa13.9□□□□□ -0.18
ITCH-204ENST00000479215 PIK3R4Q99570 1358 aa13.9□□□□□ -0.18
ITCH-204ENST00000479215 CDK12Q9NYV4 1490 aaPredicted RBP13.89□□□□□ -0.19
ITCH-204ENST00000479215 RIMS2Q9UQ26 1411 aa13.89□□□□□ -0.19
ITCH-204ENST00000479215 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
ITCH-204ENST00000479215 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
ITCH-204ENST00000479215 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
ITCH-204ENST00000479215 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
ITCH-204ENST00000479215 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
ITCH-204ENST00000479215 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
ITCH-204ENST00000479215 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
ITCH-204ENST00000479215 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
ITCH-204ENST00000479215 LRP6O75581 1613 aa13.86□□□□□ -0.19
ITCH-204ENST00000479215 BRINP3Q76B58 766 aa13.85□□□□□ -0.19
ITCH-204ENST00000479215 NGLY1Q96IV0 654 aa13.85□□□□□ -0.19
ITCH-204ENST00000479215 PTPN23Q9H3S7 1636 aa13.85□□□□□ -0.19
ITCH-204ENST00000479215 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
ITCH-204ENST00000479215 RBM6P78332 1123 aaKnown RBP13.84□□□□□ -0.19
ITCH-204ENST00000479215 AMOTL2Q9Y2J4 779 aa13.84□□□□□ -0.19
ITCH-204ENST00000479215 AFF2P51816 1311 aa13.84□□□□□ -0.19
ITCH-204ENST00000479215 CHD2O14647 1828 aaKnown RBP13.83□□□□□ -0.2
ITCH-204ENST00000479215 DCCP43146 1447 aa13.83□□□□□ -0.2
ITCH-204ENST00000479215 CROCC2H7BZ55 1655 aa13.83□□□□□ -0.2
ITCH-204ENST00000479215 QTRT2Q9H974 415 aaKnown RBP13.83□□□□□ -0.2
ITCH-204ENST00000479215 ANKRD50Q9ULJ7 1429 aa13.82□□□□□ -0.2
ITCH-204ENST00000479215 DIP2AQ14689 1571 aa13.81□□□□□ -0.2
ITCH-204ENST00000479215 NUTM2DQ5VT03 806 aaPredicted RBP13.81□□□□□ -0.2
ITCH-204ENST00000479215 SHPRHQ149N8 1683 aa13.81□□□□□ -0.2
ITCH-204ENST00000479215 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
ITCH-204ENST00000479215 C8orf37Q96NL8 207 aa13.8□□□□□ -0.2
ITCH-204ENST00000479215 ADAMTS13Q76LX8 1427 aa13.8□□□□□ -0.2
ITCH-204ENST00000479215 ADGRL2O95490 1459 aa13.8□□□□□ -0.2
ITCH-204ENST00000479215 FAM50AQ14320 339 aaKnown RBP13.78□□□□□ -0.2
ITCH-204ENST00000479215 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.78□□□□□ -0.2
ITCH-204ENST00000479215 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
ITCH-204ENST00000479215 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.21
ITCH-204ENST00000479215 TRPM2O94759 1503 aa13.77□□□□□ -0.21
ITCH-204ENST00000479215 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
ITCH-204ENST00000479215 ATAD2Q6PL18 1390 aa13.76□□□□□ -0.21
ITCH-204ENST00000479215 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
ITCH-204ENST00000479215 TRPC5Q9UL62 973 aaPredicted RBP13.74□□□□□ -0.21
ITCH-204ENST00000479215 ASXL1Q8IXJ9 1541 aa13.74□□□□□ -0.21
ITCH-204ENST00000479215 RGS12O14924 1447 aa13.73□□□□□ -0.21
ITCH-204ENST00000479215 MST1RQ04912 1400 aa13.73□□□□□ -0.21
ITCH-204ENST00000479215 GCC2Q8IWJ2 1684 aa13.72□□□□□ -0.21
ITCH-204ENST00000479215 PNPLA6Q8IY17 1366 aa13.72□□□□□ -0.21
ITCH-204ENST00000479215 USP21Q9UK80 565 aa13.72□□□□□ -0.21
ITCH-204ENST00000479215 ADAMTS2O95450 1211 aa13.71□□□□□ -0.21
ITCH-204ENST00000479215 ZNF326Q5BKZ1 582 aaKnown RBP13.71□□□□□ -0.21
ITCH-204ENST00000479215 PTPRUQ92729 1446 aa13.71□□□□□ -0.22
ITCH-204ENST00000479215 NUP155O75694 1391 aa13.69□□□□□ -0.22
ITCH-204ENST00000479215 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
ITCH-204ENST00000479215 ADGRL3Q9HAR2 1447 aa13.68□□□□□ -0.22
ITCH-204ENST00000479215 FNBP4Q8N3X1 1017 aaPredicted RBP13.68□□□□□ -0.22
ITCH-204ENST00000479215 ROCK1Q13464 1354 aa13.67□□□□□ -0.22
ITCH-204ENST00000479215 PTCH1Q13635 1447 aa13.66□□□□□ -0.22
ITCH-204ENST00000479215 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
ITCH-204ENST00000479215 METP08581 1390 aa13.66□□□□□ -0.22
ITCH-204ENST00000479215 SOS2Q07890 1332 aaPredicted RBP13.65□□□□□ -0.22
ITCH-204ENST00000479215 SETBP1Q9Y6X0 1596 aa13.65□□□□□ -0.22
ITCH-204ENST00000479215 NHSL1Q5SYE7 1610 aa13.64□□□□□ -0.23
ITCH-204ENST00000479215 UNC13BO14795 1591 aa13.64□□□□□ -0.23
ITCH-204ENST00000479215 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
ITCH-204ENST00000479215 VGFO15240 615 aaPredicted RBP13.63□□□□□ -0.23
ITCH-204ENST00000479215 XRN1Q8IZH2 1706 aaKnown RBP13.62□□□□□ -0.23
ITCH-204ENST00000479215 E9PCH4 1651 aa13.62□□□□□ -0.23
ITCH-204ENST00000479215 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
ITCH-204ENST00000479215 ORAI2Q96SN7 254 aa13.61□□□□□ -0.23
ITCH-204ENST00000479215 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
ITCH-204ENST00000479215 ATRNO75882 1429 aa13.6□□□□□ -0.23
ITCH-204ENST00000479215 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
ITCH-204ENST00000479215 GJD4Q96KN9 370 aaPredicted RBP13.6□□□□□ -0.23
ITCH-204ENST00000479215 SRCAPQ6ZRS2 3230 aa13.6□□□□□ -0.23
ITCH-204ENST00000479215 LRPPRCP42704 1394 aaKnown RBP13.59□□□□□ -0.23
ITCH-204ENST00000479215 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
ITCH-204ENST00000479215 RPGRIP1LQ68CZ1 1315 aa13.57□□□□□ -0.24
ITCH-204ENST00000479215 NRXN3Q9Y4C0 1643 aa13.57□□□□□ -0.24
ITCH-204ENST00000479215 HFM1A2PYH4 1435 aa13.56□□□□□ -0.24
ITCH-204ENST00000479215 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
ITCH-204ENST00000479215 LAMC1P11047 1609 aa13.55□□□□□ -0.24
ITCH-204ENST00000479215 UNC5CLQ8IV45 518 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms