RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
HDLBP-237ENST00000479169 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
HDLBP-237ENST00000479169 BCANQ96GW7 911 aa17.19■□□□□ 0.34
HDLBP-237ENST00000479169 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
HDLBP-237ENST00000479169 POTEAQ6S8J7 498 aa17.18■□□□□ 0.34
HDLBP-237ENST00000479169 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
HDLBP-237ENST00000479169 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
HDLBP-237ENST00000479169 SLC52A1Q9NWF4 448 aa17.17■□□□□ 0.34
HDLBP-237ENST00000479169 ANKRD50Q9ULJ7 1429 aa17.17■□□□□ 0.34
HDLBP-237ENST00000479169 TMEM131LA2VDJ0 1609 aa17.17■□□□□ 0.34
HDLBP-237ENST00000479169 RPRD2Q5VT52 1461 aaKnown RBP17.17■□□□□ 0.34
HDLBP-237ENST00000479169 MSH6P52701 1360 aa17.15■□□□□ 0.34
HDLBP-237ENST00000479169 RIMS2Q9UQ26 1411 aa17.15■□□□□ 0.34
HDLBP-237ENST00000479169 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
HDLBP-237ENST00000479169 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
HDLBP-237ENST00000479169 UNC13BO14795 1591 aa17.13■□□□□ 0.33
HDLBP-237ENST00000479169 PPP1R15AO75807 674 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-237ENST00000479169 SLAIN2Q9P270 581 aa17.12■□□□□ 0.33
HDLBP-237ENST00000479169 E9PCH4 1651 aa17.12■□□□□ 0.33
HDLBP-237ENST00000479169 COL16A1Q07092 1604 aaPredicted RBP17.1■□□□□ 0.33
HDLBP-237ENST00000479169 CHGAP10645 457 aaKnown RBP17.09■□□□□ 0.33
HDLBP-237ENST00000479169 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
HDLBP-237ENST00000479169 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
HDLBP-237ENST00000479169 JCADQ9P266 1359 aa17.08■□□□□ 0.32
HDLBP-237ENST00000479169 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
HDLBP-237ENST00000479169 TBX22Q9Y458 520 aa17.06■□□□□ 0.32
HDLBP-237ENST00000479169 IQGAP3Q86VI3 1631 aa17.06■□□□□ 0.32
HDLBP-237ENST00000479169 HDGFP51858 240 aaKnown RBP17.05■□□□□ 0.32
HDLBP-237ENST00000479169 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
HDLBP-237ENST00000479169 DIP2AQ14689 1571 aa17.05■□□□□ 0.32
HDLBP-237ENST00000479169 LRP6O75581 1613 aa17.04■□□□□ 0.32
HDLBP-237ENST00000479169 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.04■□□□□ 0.32
HDLBP-237ENST00000479169 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
HDLBP-237ENST00000479169 AHDC1Q5TGY3 1603 aaPredicted RBP17.03■□□□□ 0.32
HDLBP-237ENST00000479169 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
HDLBP-237ENST00000479169 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
HDLBP-237ENST00000479169 TRPM2O94759 1503 aa17.01■□□□□ 0.31
HDLBP-237ENST00000479169 ROCK1Q13464 1354 aa17■□□□□ 0.31
HDLBP-237ENST00000479169 PIK3R4Q99570 1358 aa17■□□□□ 0.31
HDLBP-237ENST00000479169 ATF3P18847 181 aa16.99■□□□□ 0.31
HDLBP-237ENST00000479169 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
HDLBP-237ENST00000479169 CADPS2Q86UW7 1296 aa16.98■□□□□ 0.31
HDLBP-237ENST00000479169 C19orf44Q9H6X5 657 aa16.98■□□□□ 0.31
HDLBP-237ENST00000479169 SPHKAPQ2M3C7 1700 aa16.98■□□□□ 0.31
HDLBP-237ENST00000479169 SPATA31A6Q5VVP1 1343 aa16.97■□□□□ 0.31
HDLBP-237ENST00000479169 XRN1Q8IZH2 1706 aaKnown RBP16.97■□□□□ 0.31
HDLBP-237ENST00000479169 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
HDLBP-237ENST00000479169 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
HDLBP-237ENST00000479169 NUP155O75694 1391 aa16.97■□□□□ 0.31
HDLBP-237ENST00000479169 ITGAEP38570 1179 aa16.95■□□□□ 0.3
HDLBP-237ENST00000479169 BRINP3Q76B58 766 aa16.95■□□□□ 0.3
HDLBP-237ENST00000479169 TRIM52Q96A61 297 aa16.94■□□□□ 0.3
HDLBP-237ENST00000479169 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
HDLBP-237ENST00000479169 ASXL1Q8IXJ9 1541 aa16.93■□□□□ 0.3
HDLBP-237ENST00000479169 NHSL1Q5SYE7 1610 aa16.92■□□□□ 0.3
HDLBP-237ENST00000479169 DCCP43146 1447 aa16.91■□□□□ 0.3
HDLBP-237ENST00000479169 NUTM2BA6NNL0 878 aaPredicted RBP16.91■□□□□ 0.3
HDLBP-237ENST00000479169 NUTM2EB1AL46 878 aaPredicted RBP16.91■□□□□ 0.3
HDLBP-237ENST00000479169 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
HDLBP-237ENST00000479169 NUTM2AQ8IVF1 878 aaPredicted RBP16.91■□□□□ 0.3
HDLBP-237ENST00000479169 MST1RQ04912 1400 aa16.9■□□□□ 0.3
HDLBP-237ENST00000479169 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
HDLBP-237ENST00000479169 METP08581 1390 aa16.89■□□□□ 0.3
HDLBP-237ENST00000479169 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
HDLBP-237ENST00000479169 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.29
HDLBP-237ENST00000479169 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
HDLBP-237ENST00000479169 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
HDLBP-237ENST00000479169 DDX17Q92841 729 aaKnown RBP16.87■□□□□ 0.29
HDLBP-237ENST00000479169 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
HDLBP-237ENST00000479169 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
HDLBP-237ENST00000479169 KIF1BO60333 1816 aa16.86■□□□□ 0.29
HDLBP-237ENST00000479169 RXRBP28702 533 aa16.85■□□□□ 0.29
HDLBP-237ENST00000479169 AFF2P51816 1311 aa16.85■□□□□ 0.29
HDLBP-237ENST00000479169 ADGRL3Q9HAR2 1447 aa16.85■□□□□ 0.29
HDLBP-237ENST00000479169 CDK12Q9NYV4 1490 aaPredicted RBP16.82■□□□□ 0.28
HDLBP-237ENST00000479169 PNPLA6Q8IY17 1366 aa16.81■□□□□ 0.28
HDLBP-237ENST00000479169 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
HDLBP-237ENST00000479169 C8orf37Q96NL8 207 aa16.8■□□□□ 0.28
HDLBP-237ENST00000479169 RGS12O14924 1447 aa16.79■□□□□ 0.28
HDLBP-237ENST00000479169 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
HDLBP-237ENST00000479169 LAMC1P11047 1609 aa16.78■□□□□ 0.28
HDLBP-237ENST00000479169 NAIPQ13075 1403 aa16.76■□□□□ 0.27
HDLBP-237ENST00000479169 ROBO2Q9HCK4 1378 aa16.76■□□□□ 0.27
HDLBP-237ENST00000479169 ADAMTS2O95450 1211 aa16.75■□□□□ 0.27
HDLBP-237ENST00000479169 QTRT2Q9H974 415 aaKnown RBP16.75■□□□□ 0.27
HDLBP-237ENST00000479169 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
HDLBP-237ENST00000479169 PPLO60437 1756 aa16.74■□□□□ 0.27
HDLBP-237ENST00000479169 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
HDLBP-237ENST00000479169 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
HDLBP-237ENST00000479169 SRCAPQ6ZRS2 3230 aa16.73■□□□□ 0.27
HDLBP-237ENST00000479169 NGLY1Q96IV0 654 aa16.72■□□□□ 0.27
HDLBP-237ENST00000479169 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.27
HDLBP-237ENST00000479169 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
HDLBP-237ENST00000479169 VGFO15240 615 aaPredicted RBP16.69■□□□□ 0.26
HDLBP-237ENST00000479169 EP400Q96L91 3159 aa16.69■□□□□ 0.26
HDLBP-237ENST00000479169 PRAG1Q86YV5 1406 aa16.69■□□□□ 0.26
HDLBP-237ENST00000479169 COL22A1Q8NFW1 1626 aaPredicted RBP16.68■□□□□ 0.26
HDLBP-237ENST00000479169 USP21Q9UK80 565 aa16.67■□□□□ 0.26
HDLBP-237ENST00000479169 HFM1A2PYH4 1435 aa16.67■□□□□ 0.26
HDLBP-237ENST00000479169 MARF1Q9Y4F3 1742 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms