RNA–Protein interactions for RNA: ENST00000479153.1

SUMO3-206, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 1,736 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-206ENST00000479153 RIMS2Q9UQ26 1411 aa18.98■□□□□ 0.63
SUMO3-206ENST00000479153 SLIT1O75093 1534 aa18.97■□□□□ 0.63
SUMO3-206ENST00000479153 TONSLQ96HA7 1378 aa18.96■□□□□ 0.63
SUMO3-206ENST00000479153 L3MBTL2Q969R5 705 aa18.96■□□□□ 0.63
SUMO3-206ENST00000479153 KDM2AQ9Y2K7 1162 aa18.96■□□□□ 0.63
SUMO3-206ENST00000479153 ARHGAP23Q9P227 1491 aa18.96■□□□□ 0.63
SUMO3-206ENST00000479153 ZFYVE9O95405 1425 aa18.95■□□□□ 0.62
SUMO3-206ENST00000479153 POLR1AO95602 1720 aaPredicted RBP18.95■□□□□ 0.62
SUMO3-206ENST00000479153 LTKP29376 864 aa18.95■□□□□ 0.62
SUMO3-206ENST00000479153 TXNDC2Q86VQ3 553 aa18.95■□□□□ 0.62
SUMO3-206ENST00000479153 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
SUMO3-206ENST00000479153 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
SUMO3-206ENST00000479153 NCKAP5LQ9HCH0 1330 aa18.93■□□□□ 0.62
SUMO3-206ENST00000479153 EID1Q9Y6B2 187 aa18.93■□□□□ 0.62
SUMO3-206ENST00000479153 RPGRIP1LQ68CZ1 1315 aa18.93■□□□□ 0.62
SUMO3-206ENST00000479153 STRCQ7RTU9 1775 aa18.92■□□□□ 0.62
SUMO3-206ENST00000479153 ANKLE2Q86XL3 938 aa18.92■□□□□ 0.62
SUMO3-206ENST00000479153 SCAF11Q99590 1463 aaKnown RBP18.91■□□□□ 0.62
SUMO3-206ENST00000479153 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.91■□□□□ 0.62
SUMO3-206ENST00000479153 ADGRF5Q8IZF2 1346 aa18.9■□□□□ 0.62
SUMO3-206ENST00000479153 HDGFP51858 240 aaKnown RBP18.9■□□□□ 0.62
SUMO3-206ENST00000479153 VGFO15240 615 aaPredicted RBP18.88■□□□□ 0.61
SUMO3-206ENST00000479153 BCANQ96GW7 911 aa18.88■□□□□ 0.61
SUMO3-206ENST00000479153 IQGAP1P46940 1657 aa18.87■□□□□ 0.61
SUMO3-206ENST00000479153 MYOM2P54296 1465 aa18.87■□□□□ 0.61
SUMO3-206ENST00000479153 NRXN3Q9Y4C0 1643 aa18.84■□□□□ 0.61
SUMO3-206ENST00000479153 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
SUMO3-206ENST00000479153 PLEKHG1Q9ULL1 1385 aa18.84■□□□□ 0.61
SUMO3-206ENST00000479153 SLC26A8Q96RN1 970 aa18.83■□□□□ 0.6
SUMO3-206ENST00000479153 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.6
SUMO3-206ENST00000479153 MED14O60244 1454 aa18.82■□□□□ 0.6
SUMO3-206ENST00000479153 NRXN1Q9ULB1 1477 aa18.82■□□□□ 0.6
SUMO3-206ENST00000479153 PIK3C2GO75747 1445 aa18.81■□□□□ 0.6
SUMO3-206ENST00000479153 PRAG1Q86YV5 1406 aa18.81■□□□□ 0.6
SUMO3-206ENST00000479153 NBPF8Q3BBV2 869 aa18.81■□□□□ 0.6
SUMO3-206ENST00000479153 SETBP1Q9Y6X0 1596 aa18.81■□□□□ 0.6
SUMO3-206ENST00000479153 STAC3Q96MF2 364 aa18.8■□□□□ 0.6
SUMO3-206ENST00000479153 CFAP70Q5T0N1 1121 aa18.8■□□□□ 0.6
SUMO3-206ENST00000479153 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
SUMO3-206ENST00000479153 ADAMTS13Q76LX8 1427 aa18.79■□□□□ 0.6
SUMO3-206ENST00000479153 SETD1AO15047 1707 aaKnown RBP18.79■□□□□ 0.6
SUMO3-206ENST00000479153 TRPM1Q7Z4N2 1603 aa18.77■□□□□ 0.59
SUMO3-206ENST00000479153 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
SUMO3-206ENST00000479153 C14orf93Q9H972 538 aaKnown RBP18.75■□□□□ 0.59
SUMO3-206ENST00000479153 LAMC1P11047 1609 aa18.75■□□□□ 0.59
SUMO3-206ENST00000479153 KIAA1210Q9ULL0 1709 aa18.74■□□□□ 0.59
SUMO3-206ENST00000479153 NBPF1Q3BBV0 1214 aa18.74■□□□□ 0.59
SUMO3-206ENST00000479153 DIP2AQ14689 1571 aa18.73■□□□□ 0.59
SUMO3-206ENST00000479153 METP08581 1390 aa18.73■□□□□ 0.59
SUMO3-206ENST00000479153 TBX22Q9Y458 520 aa18.73■□□□□ 0.59
SUMO3-206ENST00000479153 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
SUMO3-206ENST00000479153 ASXL1Q8IXJ9 1541 aa18.72■□□□□ 0.59
SUMO3-206ENST00000479153 CHD2O14647 1828 aaKnown RBP18.71■□□□□ 0.59
SUMO3-206ENST00000479153 ROCK2O75116 1388 aaKnown RBP18.69■□□□□ 0.58
SUMO3-206ENST00000479153 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
SUMO3-206ENST00000479153 ADGRB1O14514 1584 aa18.69■□□□□ 0.58
SUMO3-206ENST00000479153 STK26Q9P289 416 aa18.69■□□□□ 0.58
SUMO3-206ENST00000479153 STRCP1A6NGW2 1772 aa18.68■□□□□ 0.58
SUMO3-206ENST00000479153 PTPRUQ92729 1446 aa18.68■□□□□ 0.58
SUMO3-206ENST00000479153 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
SUMO3-206ENST00000479153 ZNF335Q9H4Z2 1342 aaPredicted RBP18.66■□□□□ 0.58
SUMO3-206ENST00000479153 AMOTL2Q9Y2J4 779 aa18.66■□□□□ 0.58
SUMO3-206ENST00000479153 YTHDC2Q9H6S0 1430 aaKnown RBP18.65■□□□□ 0.58
SUMO3-206ENST00000479153 PIK3R4Q99570 1358 aa18.64■□□□□ 0.57
SUMO3-206ENST00000479153 CARD11Q9BXL7 1154 aa18.64■□□□□ 0.57
SUMO3-206ENST00000479153 TRAK1Q9UPV9 953 aa18.64■□□□□ 0.57
SUMO3-206ENST00000479153 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
SUMO3-206ENST00000479153 KCNA6P17658 529 aa18.63■□□□□ 0.57
SUMO3-206ENST00000479153 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
SUMO3-206ENST00000479153 KNDC1Q76NI1 1749 aa18.62■□□□□ 0.57
SUMO3-206ENST00000479153 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
SUMO3-206ENST00000479153 GPRASP1Q5JY77 1395 aa18.61■□□□□ 0.57
SUMO3-206ENST00000479153 ARHGEF28Q8N1W1 1705 aaKnown RBP18.61■□□□□ 0.57
SUMO3-206ENST00000479153 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
SUMO3-206ENST00000479153 ABCC11Q96J66 1382 aa18.58■□□□□ 0.56
SUMO3-206ENST00000479153 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.56
SUMO3-206ENST00000479153 CPS1P31327 1500 aa18.58■□□□□ 0.56
SUMO3-206ENST00000479153 SAFB2Q14151 953 aaKnown RBP eCLIP18.57■□□□□ 0.56
SUMO3-206ENST00000479153 WAPLQ7Z5K2 1190 aa18.57■□□□□ 0.56
SUMO3-206ENST00000479153 TECPR2O15040 1411 aa18.56■□□□□ 0.56
SUMO3-206ENST00000479153 PLEKHH1Q9ULM0 1364 aa18.56■□□□□ 0.56
SUMO3-206ENST00000479153 PROSER2Q86WR7 435 aaPredicted RBP18.56■□□□□ 0.56
SUMO3-206ENST00000479153 PRAM1Q96QH2 718 aa18.55■□□□□ 0.56
SUMO3-206ENST00000479153 XIRP1Q702N8 1843 aaKnown RBP18.55■□□□□ 0.56
SUMO3-206ENST00000479153 NKTRP30414 1462 aaKnown RBP18.55■□□□□ 0.56
SUMO3-206ENST00000479153 DLC1Q96QB1 1528 aa18.55■□□□□ 0.56
SUMO3-206ENST00000479153 POGKQ9P215 609 aa18.54■□□□□ 0.56
SUMO3-206ENST00000479153 PTCH1Q13635 1447 aa18.54■□□□□ 0.56
SUMO3-206ENST00000479153 LTBP4Q8N2S1 1624 aa18.54■□□□□ 0.56
SUMO3-206ENST00000479153 USP47Q96K76 1375 aa18.54■□□□□ 0.56
SUMO3-206ENST00000479153 QRICH2Q9H0J4 1663 aa18.52■□□□□ 0.56
SUMO3-206ENST00000479153 HIRIP3Q9BW71 556 aaPredicted RBP18.52■□□□□ 0.55
SUMO3-206ENST00000479153 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.51■□□□□ 0.55
SUMO3-206ENST00000479153 LRRC7Q96NW7 1537 aa18.51■□□□□ 0.55
SUMO3-206ENST00000479153 TMEM94Q12767 1356 aa18.51■□□□□ 0.55
SUMO3-206ENST00000479153 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
SUMO3-206ENST00000479153 FAM135BQ49AJ0 1406 aa18.5■□□□□ 0.55
SUMO3-206ENST00000479153 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
SUMO3-206ENST00000479153 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
SUMO3-206ENST00000479153 NALCNQ8IZF0 1738 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms