RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 THEMISQ8N1K5 641 aaPredicted RBP19.62■□□□□ 0.73
SMARCAL1-211ENST00000479008 KDM2AQ9Y2K7 1162 aa19.62■□□□□ 0.73
SMARCAL1-211ENST00000479008 SLIT1O75093 1534 aa19.61■□□□□ 0.73
SMARCAL1-211ENST00000479008 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
SMARCAL1-211ENST00000479008 MYOM2P54296 1465 aa19.6■□□□□ 0.73
SMARCAL1-211ENST00000479008 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
SMARCAL1-211ENST00000479008 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
SMARCAL1-211ENST00000479008 NUTM2DQ5VT03 806 aaPredicted RBP19.59■□□□□ 0.73
SMARCAL1-211ENST00000479008 LMTK3Q96Q04 1460 aa19.59■□□□□ 0.73
SMARCAL1-211ENST00000479008 POLR1AO95602 1720 aaPredicted RBP19.57■□□□□ 0.72
SMARCAL1-211ENST00000479008 PPP1R15AO75807 674 aaPredicted RBP19.57■□□□□ 0.72
SMARCAL1-211ENST00000479008 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMARCAL1-211ENST00000479008 ADGRF5Q8IZF2 1346 aa19.55■□□□□ 0.72
SMARCAL1-211ENST00000479008 VGFO15240 615 aaPredicted RBP19.55■□□□□ 0.72
SMARCAL1-211ENST00000479008 HDGFP51858 240 aaKnown RBP19.55■□□□□ 0.72
SMARCAL1-211ENST00000479008 STAC3Q96MF2 364 aa19.55■□□□□ 0.72
SMARCAL1-211ENST00000479008 NRXN1Q9ULB1 1477 aa19.54■□□□□ 0.72
SMARCAL1-211ENST00000479008 PRAG1Q86YV5 1406 aa19.54■□□□□ 0.72
SMARCAL1-211ENST00000479008 TXNDC2Q86VQ3 553 aa19.54■□□□□ 0.72
SMARCAL1-211ENST00000479008 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
SMARCAL1-211ENST00000479008 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
SMARCAL1-211ENST00000479008 LTKP29376 864 aa19.53■□□□□ 0.72
SMARCAL1-211ENST00000479008 IQGAP1P46940 1657 aa19.52■□□□□ 0.72
SMARCAL1-211ENST00000479008 TRPM1Q7Z4N2 1603 aa19.52■□□□□ 0.72
SMARCAL1-211ENST00000479008 HSPA2P54652 639 aa19.52■□□□□ 0.72
SMARCAL1-211ENST00000479008 NBPF8Q3BBV2 869 aa19.52■□□□□ 0.72
SMARCAL1-211ENST00000479008 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
SMARCAL1-211ENST00000479008 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
SMARCAL1-211ENST00000479008 PIK3C2GO75747 1445 aa19.51■□□□□ 0.71
SMARCAL1-211ENST00000479008 ANKLE2Q86XL3 938 aa19.5■□□□□ 0.71
SMARCAL1-211ENST00000479008 NRXN3Q9Y4C0 1643 aa19.5■□□□□ 0.71
SMARCAL1-211ENST00000479008 LAMC1P11047 1609 aa19.49■□□□□ 0.71
SMARCAL1-211ENST00000479008 PLEKHG1Q9ULL1 1385 aa19.48■□□□□ 0.71
SMARCAL1-211ENST00000479008 SETBP1Q9Y6X0 1596 aa19.48■□□□□ 0.71
SMARCAL1-211ENST00000479008 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
SMARCAL1-211ENST00000479008 SETD1AO15047 1707 aaKnown RBP19.47■□□□□ 0.71
SMARCAL1-211ENST00000479008 STRCQ7RTU9 1775 aa19.47■□□□□ 0.71
SMARCAL1-211ENST00000479008 BCANQ96GW7 911 aa19.46■□□□□ 0.71
SMARCAL1-211ENST00000479008 ALKQ9UM73 1620 aa19.46■□□□□ 0.71
SMARCAL1-211ENST00000479008 RALGAPBQ86X10 1494 aa19.46■□□□□ 0.71
SMARCAL1-211ENST00000479008 NCKAP5LQ9HCH0 1330 aa19.46■□□□□ 0.71
SMARCAL1-211ENST00000479008 CFAP70Q5T0N1 1121 aa19.44■□□□□ 0.7
SMARCAL1-211ENST00000479008 NPHP4O75161 1426 aaPredicted RBP19.43■□□□□ 0.7
SMARCAL1-211ENST00000479008 MED14O60244 1454 aa19.43■□□□□ 0.7
SMARCAL1-211ENST00000479008 C14orf93Q9H972 538 aaKnown RBP19.43■□□□□ 0.7
SMARCAL1-211ENST00000479008 ADAMTS13Q76LX8 1427 aa19.42■□□□□ 0.7
SMARCAL1-211ENST00000479008 DIP2AQ14689 1571 aa19.41■□□□□ 0.7
SMARCAL1-211ENST00000479008 ROCK2O75116 1388 aaKnown RBP19.41■□□□□ 0.7
SMARCAL1-211ENST00000479008 ASXL1Q8IXJ9 1541 aa19.41■□□□□ 0.7
SMARCAL1-211ENST00000479008 NBPF1Q3BBV0 1214 aa19.4■□□□□ 0.7
SMARCAL1-211ENST00000479008 SLC26A8Q96RN1 970 aa19.39■□□□□ 0.69
SMARCAL1-211ENST00000479008 ADGRB1O14514 1584 aa19.39■□□□□ 0.69
SMARCAL1-211ENST00000479008 GPRASP1Q5JY77 1395 aa19.36■□□□□ 0.69
SMARCAL1-211ENST00000479008 TMEM132EQ6IEE7 984 aa19.36■□□□□ 0.69
SMARCAL1-211ENST00000479008 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
SMARCAL1-211ENST00000479008 TBX22Q9Y458 520 aa19.35■□□□□ 0.69
SMARCAL1-211ENST00000479008 METP08581 1390 aa19.34■□□□□ 0.69
SMARCAL1-211ENST00000479008 CHD2O14647 1828 aaKnown RBP19.32■□□□□ 0.68
SMARCAL1-211ENST00000479008 KNDC1Q76NI1 1749 aa19.32■□□□□ 0.68
SMARCAL1-211ENST00000479008 YTHDC2Q9H6S0 1430 aaKnown RBP19.32■□□□□ 0.68
SMARCAL1-211ENST00000479008 ARHGEF28Q8N1W1 1705 aaKnown RBP19.31■□□□□ 0.68
SMARCAL1-211ENST00000479008 XRN1Q8IZH2 1706 aaKnown RBP19.29■□□□□ 0.68
SMARCAL1-211ENST00000479008 PTPRUQ92729 1446 aa19.29■□□□□ 0.68
SMARCAL1-211ENST00000479008 STK26Q9P289 416 aa19.29■□□□□ 0.68
SMARCAL1-211ENST00000479008 LRPPRCP42704 1394 aaKnown RBP19.29■□□□□ 0.68
SMARCAL1-211ENST00000479008 PIK3R4Q99570 1358 aa19.29■□□□□ 0.68
SMARCAL1-211ENST00000479008 TRAK1Q9UPV9 953 aa19.28■□□□□ 0.68
SMARCAL1-211ENST00000479008 USP47Q96K76 1375 aa19.28■□□□□ 0.68
SMARCAL1-211ENST00000479008 DMRT2Q9Y5R5 561 aa19.26■□□□□ 0.67
SMARCAL1-211ENST00000479008 NWD1Q149M9 1564 aa19.26■□□□□ 0.67
SMARCAL1-211ENST00000479008 CPS1P31327 1500 aa19.25■□□□□ 0.67
SMARCAL1-211ENST00000479008 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
SMARCAL1-211ENST00000479008 STRCP1A6NGW2 1772 aa19.25■□□□□ 0.67
SMARCAL1-211ENST00000479008 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMARCAL1-211ENST00000479008 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
SMARCAL1-211ENST00000479008 ABCC11Q96J66 1382 aa19.24■□□□□ 0.67
SMARCAL1-211ENST00000479008 AMOTL2Q9Y2J4 779 aa19.24■□□□□ 0.67
SMARCAL1-211ENST00000479008 TECPR2O15040 1411 aa19.24■□□□□ 0.67
SMARCAL1-211ENST00000479008 QRICH2Q9H0J4 1663 aa19.24■□□□□ 0.67
SMARCAL1-211ENST00000479008 HSPA5P11021 654 aaKnown RBP19.23■□□□□ 0.67
SMARCAL1-211ENST00000479008 KCNA6P17658 529 aa19.21■□□□□ 0.67
SMARCAL1-211ENST00000479008 PTCH1Q13635 1447 aa19.2■□□□□ 0.66
SMARCAL1-211ENST00000479008 HIRIP3Q9BW71 556 aaPredicted RBP19.2■□□□□ 0.66
SMARCAL1-211ENST00000479008 ROBO2Q9HCK4 1378 aa19.19■□□□□ 0.66
SMARCAL1-211ENST00000479008 ST20-MTHFSA0A0A6YYL1 179 aa19.19■□□□□ 0.66
SMARCAL1-211ENST00000479008 CENPJQ9HC77 1338 aaPredicted RBP19.19■□□□□ 0.66
SMARCAL1-211ENST00000479008 FAM135BQ49AJ0 1406 aa19.18■□□□□ 0.66
SMARCAL1-211ENST00000479008 PRAM1Q96QH2 718 aa19.18■□□□□ 0.66
SMARCAL1-211ENST00000479008 POGKQ9P215 609 aa19.18■□□□□ 0.66
SMARCAL1-211ENST00000479008 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
SMARCAL1-211ENST00000479008 NKTRP30414 1462 aaKnown RBP19.17■□□□□ 0.66
SMARCAL1-211ENST00000479008 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
SMARCAL1-211ENST00000479008 SIRT1Q96EB6 747 aa19.17■□□□□ 0.66
SMARCAL1-211ENST00000479008 SAFB2Q14151 953 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMARCAL1-211ENST00000479008 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
SMARCAL1-211ENST00000479008 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.14■□□□□ 0.66
SMARCAL1-211ENST00000479008 XIRP1Q702N8 1843 aaKnown RBP19.12■□□□□ 0.65
SMARCAL1-211ENST00000479008 NALCNQ8IZF0 1738 aa19.12■□□□□ 0.65
SMARCAL1-211ENST00000479008 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
SMARCAL1-211ENST00000479008 MINK1Q8N4C8 1332 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms