RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 NUDT18Q6ZVK8 323 aa12.27□□□□□ -0.45
CDK13-204ENST00000478563 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.27□□□□□ -0.45
CDK13-204ENST00000478563 TESPA1A2RU30 521 aaPredicted RBP12.26□□□□□ -0.45
CDK13-204ENST00000478563 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
CDK13-204ENST00000478563 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
CDK13-204ENST00000478563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDK13-204ENST00000478563 EYA1Q99502 592 aa12.22□□□□□ -0.45
CDK13-204ENST00000478563 C14orf37Q86TY3 774 aa12.21□□□□□ -0.45
CDK13-204ENST00000478563 ARXQ96QS3 562 aa12.21□□□□□ -0.45
CDK13-204ENST00000478563 APLP1P51693 650 aa12.18□□□□□ -0.46
CDK13-204ENST00000478563 NUTM2FA1L443 756 aa12.17□□□□□ -0.46
CDK13-204ENST00000478563 RBM26Q5T8P6 1007 aaKnown RBP12.15□□□□□ -0.46
CDK13-204ENST00000478563 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
CDK13-204ENST00000478563 GPR37O15354 613 aa12.14□□□□□ -0.47
CDK13-204ENST00000478563 SWT1Q5T5J6 900 aaKnown RBP12.14□□□□□ -0.47
CDK13-204ENST00000478563 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
CDK13-204ENST00000478563 POTECB2RU33 542 aa12.12□□□□□ -0.47
CDK13-204ENST00000478563 FCHSD2O94868 740 aa12.12□□□□□ -0.47
CDK13-204ENST00000478563 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
CDK13-204ENST00000478563 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
CDK13-204ENST00000478563 RNF40O75150 1001 aa12.1□□□□□ -0.47
CDK13-204ENST00000478563 COPS2P61201 443 aa12.09□□□□□ -0.47
CDK13-204ENST00000478563 MYT1Q01538 1121 aa12.08□□□□□ -0.48
CDK13-204ENST00000478563 SMYD5Q6GMV2 418 aa12.08□□□□□ -0.48
CDK13-204ENST00000478563 FECHP22830 423 aa12.07□□□□□ -0.48
CDK13-204ENST00000478563 GGCXP38435 758 aa12.07□□□□□ -0.48
CDK13-204ENST00000478563 HIC1Q14526 733 aa12.07□□□□□ -0.48
CDK13-204ENST00000478563 EMID1Q96A84 441 aaPredicted RBP12.07□□□□□ -0.48
CDK13-204ENST00000478563 DNAJB2P25686 324 aa12.06□□□□□ -0.48
CDK13-204ENST00000478563 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
CDK13-204ENST00000478563 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
CDK13-204ENST00000478563 TMUB1Q9BVT8 246 aa12.06□□□□□ -0.48
CDK13-204ENST00000478563 TMEM134Q9H6X4 195 aa12.06□□□□□ -0.48
CDK13-204ENST00000478563 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
CDK13-204ENST00000478563 ZC3H15Q8WU90 426 aaKnown RBP12.05□□□□□ -0.48
CDK13-204ENST00000478563 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
CDK13-204ENST00000478563 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
CDK13-204ENST00000478563 GNPATO15228 680 aa12.02□□□□□ -0.49
CDK13-204ENST00000478563 SLC19A1P41440 591 aa12.02□□□□□ -0.49
CDK13-204ENST00000478563 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
CDK13-204ENST00000478563 PKDCCQ504Y2 493 aa12.02□□□□□ -0.49
CDK13-204ENST00000478563 HOMEZQ8IX15 550 aa12.02□□□□□ -0.49
CDK13-204ENST00000478563 ZPR1O75312 459 aa12.01□□□□□ -0.49
CDK13-204ENST00000478563 DGAT1O75907 488 aa12.01□□□□□ -0.49
CDK13-204ENST00000478563 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
CDK13-204ENST00000478563 RNF223E7ERA6 249 aa11.99□□□□□ -0.49
CDK13-204ENST00000478563 LCE2AQ5TA79 106 aaPredicted RBP11.99□□□□□ -0.49
CDK13-204ENST00000478563 METTL3Q86U44 580 aaKnown RBP11.99□□□□□ -0.49
CDK13-204ENST00000478563 NECTIN2Q92692 538 aa11.99□□□□□ -0.49
CDK13-204ENST00000478563 SLC24A3Q9HC58 644 aa11.99□□□□□ -0.49
CDK13-204ENST00000478563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
CDK13-204ENST00000478563 OATP04181 439 aa11.97□□□□□ -0.49
CDK13-204ENST00000478563 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
CDK13-204ENST00000478563 SLC10A3P09131 477 aa11.95□□□□□ -0.5
CDK13-204ENST00000478563 TREML4Q6UXN2 200 aa11.95□□□□□ -0.5
CDK13-204ENST00000478563 GPIHBP1Q8IV16 184 aa11.95□□□□□ -0.5
CDK13-204ENST00000478563 PRR20EP86478 221 aa11.94□□□□□ -0.5
CDK13-204ENST00000478563 PRR20CP86479 221 aa11.94□□□□□ -0.5
CDK13-204ENST00000478563 PRR20DP86480 221 aa11.94□□□□□ -0.5
CDK13-204ENST00000478563 PRR20BP86481 221 aa11.94□□□□□ -0.5
CDK13-204ENST00000478563 PRR20AP86496 221 aa11.94□□□□□ -0.5
CDK13-204ENST00000478563 ZNF598Q86UK7 904 aaKnown RBP11.93□□□□□ -0.5
CDK13-204ENST00000478563 PHOX2BQ99453 314 aa11.92□□□□□ -0.5
CDK13-204ENST00000478563 SLC4A3P48751 1232 aa11.91□□□□□ -0.5
CDK13-204ENST00000478563 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
CDK13-204ENST00000478563 FAM187AA6NFU0 413 aa11.9□□□□□ -0.5
CDK13-204ENST00000478563 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
CDK13-204ENST00000478563 BLOC1S3Q6QNY0 202 aa11.9□□□□□ -0.5
CDK13-204ENST00000478563 ST8SIA5O15466 376 aa11.89□□□□□ -0.51
CDK13-204ENST00000478563 ACTN4O43707 911 aaKnown RBP11.89□□□□□ -0.51
CDK13-204ENST00000478563 TLL1O43897 1013 aa11.89□□□□□ -0.51
CDK13-204ENST00000478563 PRR14Q9BWN1 585 aa11.89□□□□□ -0.51
CDK13-204ENST00000478563 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
CDK13-204ENST00000478563 TNFRSF10AO00220 468 aa11.88□□□□□ -0.51
CDK13-204ENST00000478563 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
CDK13-204ENST00000478563 GDF9O60383 454 aa11.88□□□□□ -0.51
CDK13-204ENST00000478563 ZNF697Q5TEC3 545 aa11.88□□□□□ -0.51
CDK13-204ENST00000478563 CFHP08603 1231 aa11.87□□□□□ -0.51
CDK13-204ENST00000478563 NLRP7Q8WX94 980 aa11.87□□□□□ -0.51
CDK13-204ENST00000478563 ZMYND10O75800 440 aa11.86□□□□□ -0.51
CDK13-204ENST00000478563 ANKLE1Q8NAG6 615 aa11.86□□□□□ -0.51
CDK13-204ENST00000478563 AAASQ9NRG9 546 aa11.86□□□□□ -0.51
CDK13-204ENST00000478563 S1PR4O95977 384 aa11.84□□□□□ -0.51
CDK13-204ENST00000478563 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
CDK13-204ENST00000478563 MAP2K5Q13163 448 aa11.82□□□□□ -0.52
CDK13-204ENST00000478563 IRF6O14896 467 aa11.79□□□□□ -0.52
CDK13-204ENST00000478563 PLA2G2CQ5R387 149 aa11.78□□□□□ -0.52
CDK13-204ENST00000478563 DACH1Q9UI36 760 aa11.78□□□□□ -0.52
CDK13-204ENST00000478563 BARGINQ6ZT62 677 aa11.77□□□□□ -0.53
CDK13-204ENST00000478563 DDX11L8A8MPP1 907 aa11.76□□□□□ -0.53
CDK13-204ENST00000478563 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
CDK13-204ENST00000478563 WFS1O76024 890 aa11.74□□□□□ -0.53
CDK13-204ENST00000478563 GCGRP47871 477 aa11.74□□□□□ -0.53
CDK13-204ENST00000478563 PUS10Q3MIT2 529 aaKnown RBP11.74□□□□□ -0.53
CDK13-204ENST00000478563 PKD2L1Q9P0L9 805 aa11.74□□□□□ -0.53
CDK13-204ENST00000478563 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
CDK13-204ENST00000478563 SCUBE3Q8IX30 993 aa11.73□□□□□ -0.53
CDK13-204ENST00000478563 RDH13Q8NBN7 331 aa11.73□□□□□ -0.53
CDK13-204ENST00000478563 CCDC102AQ96A19 550 aa11.72□□□□□ -0.53
CDK13-204ENST00000478563 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms