RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 MYO5BQ9ULV0 1848 aa19.97■□□□□ 0.79
TDP2-204ENST00000478507 ROBO1Q9Y6N7 1651 aa19.97■□□□□ 0.79
TDP2-204ENST00000478507 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
TDP2-204ENST00000478507 GCC2Q8IWJ2 1684 aa19.94■□□□□ 0.78
TDP2-204ENST00000478507 UNC13BO14795 1591 aa19.93■□□□□ 0.78
TDP2-204ENST00000478507 CHD2O14647 1828 aaKnown RBP19.92■□□□□ 0.78
TDP2-204ENST00000478507 PROSER2Q86WR7 435 aaPredicted RBP19.92■□□□□ 0.78
TDP2-204ENST00000478507 RBM33Q96EV2 1170 aaKnown RBP19.92■□□□□ 0.78
TDP2-204ENST00000478507 PLEKHG1Q9ULL1 1385 aa19.92■□□□□ 0.78
TDP2-204ENST00000478507 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
TDP2-204ENST00000478507 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
TDP2-204ENST00000478507 E9PCH4 1651 aa19.87■□□□□ 0.77
TDP2-204ENST00000478507 MSH6P52701 1360 aa19.86■□□□□ 0.77
TDP2-204ENST00000478507 ADAMTS13Q76LX8 1427 aa19.85■□□□□ 0.77
TDP2-204ENST00000478507 IQGAP3Q86VI3 1631 aa19.84■□□□□ 0.77
TDP2-204ENST00000478507 POTEAQ6S8J7 498 aa19.84■□□□□ 0.77
TDP2-204ENST00000478507 SLAIN2Q9P270 581 aa19.84■□□□□ 0.77
TDP2-204ENST00000478507 ROCK1Q13464 1354 aa19.83■□□□□ 0.77
TDP2-204ENST00000478507 PHLPP1O60346 1717 aa19.83■□□□□ 0.77
TDP2-204ENST00000478507 TBX22Q9Y458 520 aa19.83■□□□□ 0.77
TDP2-204ENST00000478507 NCOA3Q9Y6Q9 1424 aa19.83■□□□□ 0.76
TDP2-204ENST00000478507 DIP2AQ14689 1571 aa19.82■□□□□ 0.76
TDP2-204ENST00000478507 COL16A1Q07092 1604 aaPredicted RBP19.81■□□□□ 0.76
TDP2-204ENST00000478507 BCANQ96GW7 911 aa19.81■□□□□ 0.76
TDP2-204ENST00000478507 HDGFP51858 240 aaKnown RBP19.8■□□□□ 0.76
TDP2-204ENST00000478507 PPP1R15AO75807 674 aaPredicted RBP19.79■□□□□ 0.76
TDP2-204ENST00000478507 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
TDP2-204ENST00000478507 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
TDP2-204ENST00000478507 JCADQ9P266 1359 aa19.78■□□□□ 0.76
TDP2-204ENST00000478507 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.77■□□□□ 0.76
TDP2-204ENST00000478507 AHDC1Q5TGY3 1603 aaPredicted RBP19.75■□□□□ 0.75
TDP2-204ENST00000478507 PTPRUQ92729 1446 aa19.74■□□□□ 0.75
TDP2-204ENST00000478507 NRXN3Q9Y4C0 1643 aa19.73■□□□□ 0.75
TDP2-204ENST00000478507 TRPM2O94759 1503 aa19.73■□□□□ 0.75
TDP2-204ENST00000478507 NUTM2DQ5VT03 806 aaPredicted RBP19.73■□□□□ 0.75
TDP2-204ENST00000478507 LRP6O75581 1613 aa19.73■□□□□ 0.75
TDP2-204ENST00000478507 CHGAP10645 457 aaKnown RBP19.72■□□□□ 0.75
TDP2-204ENST00000478507 NUP155O75694 1391 aa19.71■□□□□ 0.75
TDP2-204ENST00000478507 C19orf44Q9H6X5 657 aa19.71■□□□□ 0.75
TDP2-204ENST00000478507 SETD1AO15047 1707 aaKnown RBP19.71■□□□□ 0.75
TDP2-204ENST00000478507 XRN1Q8IZH2 1706 aaKnown RBP19.71■□□□□ 0.75
TDP2-204ENST00000478507 SETBP1Q9Y6X0 1596 aa19.7■□□□□ 0.74
TDP2-204ENST00000478507 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
TDP2-204ENST00000478507 SPHKAPQ2M3C7 1700 aa19.69■□□□□ 0.74
TDP2-204ENST00000478507 CADPS2Q86UW7 1296 aa19.69■□□□□ 0.74
TDP2-204ENST00000478507 SPATA31A6Q5VVP1 1343 aa19.68■□□□□ 0.74
TDP2-204ENST00000478507 DCCP43146 1447 aa19.68■□□□□ 0.74
TDP2-204ENST00000478507 AMOTL2Q9Y2J4 779 aa19.67■□□□□ 0.74
TDP2-204ENST00000478507 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
TDP2-204ENST00000478507 ATF3P18847 181 aa19.65■□□□□ 0.74
TDP2-204ENST00000478507 BRINP3Q76B58 766 aa19.64■□□□□ 0.73
TDP2-204ENST00000478507 ASXL1Q8IXJ9 1541 aa19.62■□□□□ 0.73
TDP2-204ENST00000478507 MST1RQ04912 1400 aa19.61■□□□□ 0.73
TDP2-204ENST00000478507 METP08581 1390 aa19.61■□□□□ 0.73
TDP2-204ENST00000478507 NHSL1Q5SYE7 1610 aa19.61■□□□□ 0.73
TDP2-204ENST00000478507 NEXMIFQ5QGS0 1516 aa19.61■□□□□ 0.73
TDP2-204ENST00000478507 ITGAEP38570 1179 aa19.6■□□□□ 0.73
TDP2-204ENST00000478507 CLTCL1P53675 1640 aa19.6■□□□□ 0.73
TDP2-204ENST00000478507 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
TDP2-204ENST00000478507 ZNF772Q68DY9 489 aaPredicted RBP19.57■□□□□ 0.72
TDP2-204ENST00000478507 NALCNQ8IZF0 1738 aa19.56■□□□□ 0.72
TDP2-204ENST00000478507 ADGRL3Q9HAR2 1447 aa19.56■□□□□ 0.72
TDP2-204ENST00000478507 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
TDP2-204ENST00000478507 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
TDP2-204ENST00000478507 NAIPQ13075 1403 aa19.52■□□□□ 0.72
TDP2-204ENST00000478507 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
TDP2-204ENST00000478507 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.72
TDP2-204ENST00000478507 KIF1BO60333 1816 aa19.52■□□□□ 0.72
TDP2-204ENST00000478507 CDK12Q9NYV4 1490 aaPredicted RBP19.52■□□□□ 0.72
TDP2-204ENST00000478507 LAMC1P11047 1609 aa19.51■□□□□ 0.71
TDP2-204ENST00000478507 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
TDP2-204ENST00000478507 UPF1Q92900 1129 aaKnown RBP eCLIP19.5■□□□□ 0.71
TDP2-204ENST00000478507 PNPLA6Q8IY17 1366 aa19.49■□□□□ 0.71
TDP2-204ENST00000478507 PTCH1Q13635 1447 aa19.49■□□□□ 0.71
TDP2-204ENST00000478507 NUTM2BA6NNL0 878 aaPredicted RBP19.48■□□□□ 0.71
TDP2-204ENST00000478507 NUTM2EB1AL46 878 aaPredicted RBP19.48■□□□□ 0.71
TDP2-204ENST00000478507 NUTM2AQ8IVF1 878 aaPredicted RBP19.48■□□□□ 0.71
TDP2-204ENST00000478507 TRIM52Q96A61 297 aa19.48■□□□□ 0.71
TDP2-204ENST00000478507 RXRBP28702 533 aa19.47■□□□□ 0.71
TDP2-204ENST00000478507 DDX17Q92841 729 aaKnown RBP19.47■□□□□ 0.71
TDP2-204ENST00000478507 LRRC59Q96AG4 307 aaKnown RBP19.47■□□□□ 0.71
TDP2-204ENST00000478507 AFF2P51816 1311 aa19.47■□□□□ 0.71
TDP2-204ENST00000478507 C1orf167Q5SNV9 1468 aa19.47■□□□□ 0.71
TDP2-204ENST00000478507 ROBO2Q9HCK4 1378 aa19.45■□□□□ 0.7
TDP2-204ENST00000478507 HFM1A2PYH4 1435 aa19.43■□□□□ 0.7
TDP2-204ENST00000478507 PPLO60437 1756 aa19.43■□□□□ 0.7
TDP2-204ENST00000478507 VGFO15240 615 aaPredicted RBP19.41■□□□□ 0.7
TDP2-204ENST00000478507 RGS12O14924 1447 aa19.41■□□□□ 0.7
TDP2-204ENST00000478507 SOS2Q07890 1332 aaPredicted RBP19.4■□□□□ 0.7
TDP2-204ENST00000478507 C8orf37Q96NL8 207 aa19.39■□□□□ 0.69
TDP2-204ENST00000478507 RPGRIP1LQ68CZ1 1315 aa19.39■□□□□ 0.69
TDP2-204ENST00000478507 ORAI2Q96SN7 254 aa19.38■□□□□ 0.69
TDP2-204ENST00000478507 COL22A1Q8NFW1 1626 aaPredicted RBP19.36■□□□□ 0.69
TDP2-204ENST00000478507 RBM6P78332 1123 aaKnown RBP19.36■□□□□ 0.69
TDP2-204ENST00000478507 QTRT2Q9H974 415 aaKnown RBP19.35■□□□□ 0.69
TDP2-204ENST00000478507 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
TDP2-204ENST00000478507 SLC4A1APQ9BWU0 796 aaKnown RBP19.33■□□□□ 0.68
TDP2-204ENST00000478507 SRCAPQ6ZRS2 3230 aa19.33■□□□□ 0.68
TDP2-204ENST00000478507 ADAMTS2O95450 1211 aa19.32■□□□□ 0.68
TDP2-204ENST00000478507 MYOM2P54296 1465 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms