RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 SKAP1Q86WV1 359 aa8.03□□□□□ -1.12
SH3D19-207ENST00000478503 AAMPQ13685 434 aa8.03□□□□□ -1.12
SH3D19-207ENST00000478503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.03□□□□□ -1.12
SH3D19-207ENST00000478503 PTMSP20962 102 aa8.03□□□□□ -1.12
SH3D19-207ENST00000478503 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
SH3D19-207ENST00000478503 MYBBP1AQ9BQG0 1328 aaKnown RBP8.03□□□□□ -1.12
SH3D19-207ENST00000478503 CHD1O14646 1710 aa8.02□□□□□ -1.12
SH3D19-207ENST00000478503 TESK2Q96S53 571 aa8.02□□□□□ -1.12
SH3D19-207ENST00000478503 ADGBQ8N7X0 1667 aa8.02□□□□□ -1.13
SH3D19-207ENST00000478503 PUS7Q96PZ0 661 aaKnown RBP8.02□□□□□ -1.13
SH3D19-207ENST00000478503 SCAPERQ9BY12 1400 aa8.02□□□□□ -1.13
SH3D19-207ENST00000478503 RALGAPBQ86X10 1494 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 TMF1P82094 1093 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 CFAP70Q5T0N1 1121 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 ADCY10Q96PN6 1610 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 PRAG1Q86YV5 1406 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 PER1O15534 1290 aaPredicted RBP8.01□□□□□ -1.13
SH3D19-207ENST00000478503 EXOC6Q8TAG9 804 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 CDC42BPBQ9Y5S2 1711 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 KTN1Q86UP2 1357 aaKnown RBP8.01□□□□□ -1.13
SH3D19-207ENST00000478503 A2MP01023 1474 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 SHANK2Q9UPX8 1470 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 KDM5CP41229 1560 aa8.01□□□□□ -1.13
SH3D19-207ENST00000478503 CCDC146Q8IYE0 955 aa8□□□□□ -1.13
SH3D19-207ENST00000478503 CNPY4Q8N129 248 aa8□□□□□ -1.13
SH3D19-207ENST00000478503 NLRP13Q86W25 1043 aa8□□□□□ -1.13
SH3D19-207ENST00000478503 CROCC2H7BZ55 1655 aa8□□□□□ -1.13
SH3D19-207ENST00000478503 SAFB2Q14151 953 aaKnown RBP eCLIP8□□□□□ -1.13
SH3D19-207ENST00000478503 RALBP1Q15311 655 aa8□□□□□ -1.13
SH3D19-207ENST00000478503 UHRF1BP1Q6BDS2 1440 aa8□□□□□ -1.13
SH3D19-207ENST00000478503 NEUROD2Q15784 382 aa8□□□□□ -1.13
SH3D19-207ENST00000478503 KNSTRNQ9Y448 316 aa8□□□□□ -1.13
SH3D19-207ENST00000478503 ADAMTS8Q9UP79 889 aa7.99□□□□□ -1.13
SH3D19-207ENST00000478503 MTMR7Q9Y216 660 aa7.99□□□□□ -1.13
SH3D19-207ENST00000478503 TMEM132EQ6IEE7 984 aa7.99□□□□□ -1.13
SH3D19-207ENST00000478503 TMED8Q6PL24 325 aaPredicted RBP7.99□□□□□ -1.13
SH3D19-207ENST00000478503 PLCH2O75038 1416 aa7.98□□□□□ -1.13
SH3D19-207ENST00000478503 ABCC2Q92887 1545 aa7.98□□□□□ -1.13
SH3D19-207ENST00000478503 NPM1P06748 294 aaKnown RBP eCLIP7.98□□□□□ -1.13
SH3D19-207ENST00000478503 WWC1Q8IX03 1113 aa7.98□□□□□ -1.13
SH3D19-207ENST00000478503 RCAN3Q9UKA8 241 aa7.98□□□□□ -1.13
SH3D19-207ENST00000478503 TRAK1Q9UPV9 953 aa7.98□□□□□ -1.13
SH3D19-207ENST00000478503 ADGRF5Q8IZF2 1346 aa7.97□□□□□ -1.13
SH3D19-207ENST00000478503 RAPGEF3O95398 923 aa7.97□□□□□ -1.13
SH3D19-207ENST00000478503 TICAM2Q86XR7 235 aa7.97□□□□□ -1.13
SH3D19-207ENST00000478503 CLSTN1O94985 981 aa7.97□□□□□ -1.13
SH3D19-207ENST00000478503 ERBINQ96RT1 1412 aa7.96□□□□□ -1.13
SH3D19-207ENST00000478503 CERS3Q8IU89 383 aa7.96□□□□□ -1.13
SH3D19-207ENST00000478503 PREX2Q70Z35 1606 aa7.96□□□□□ -1.14
SH3D19-207ENST00000478503 APBB1O00213 710 aa7.96□□□□□ -1.14
SH3D19-207ENST00000478503 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.14
SH3D19-207ENST00000478503 KDM5DQ9BY66 1539 aa7.96□□□□□ -1.14
SH3D19-207ENST00000478503 ARHGEF5Q12774 1597 aa7.95□□□□□ -1.14
SH3D19-207ENST00000478503 BRD4O60885 1362 aaPredicted RBP7.95□□□□□ -1.14
SH3D19-207ENST00000478503 WDR43Q15061 677 aaKnown RBP eCLIP7.95□□□□□ -1.14
SH3D19-207ENST00000478503 RRP1P56182 461 aaKnown RBP7.95□□□□□ -1.14
SH3D19-207ENST00000478503 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
SH3D19-207ENST00000478503 C20orf194Q5TEA3 1177 aa7.95□□□□□ -1.14
SH3D19-207ENST00000478503 PIAS4Q8N2W9 510 aaPredicted RBP7.95□□□□□ -1.14
SH3D19-207ENST00000478503 PLCD4Q9BRC7 762 aa7.94□□□□□ -1.14
SH3D19-207ENST00000478503 PPP2R1AP30153 589 aa7.94□□□□□ -1.14
SH3D19-207ENST00000478503 STK26Q9P289 416 aa7.94□□□□□ -1.14
SH3D19-207ENST00000478503 UGGT1Q9NYU2 1555 aa7.94□□□□□ -1.14
SH3D19-207ENST00000478503 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
SH3D19-207ENST00000478503 FANCAO15360 1455 aa7.93□□□□□ -1.14
SH3D19-207ENST00000478503 PATL2C9JE40 543 aaKnown RBP7.93□□□□□ -1.14
SH3D19-207ENST00000478503 PARD3Q8TEW0 1356 aa7.93□□□□□ -1.14
SH3D19-207ENST00000478503 RRP7AQ9Y3A4 280 aaKnown RBP7.93□□□□□ -1.14
SH3D19-207ENST00000478503 PAK3O75914 559 aaPredicted RBP7.92□□□□□ -1.14
SH3D19-207ENST00000478503 CRBNQ96SW2 442 aa7.92□□□□□ -1.14
SH3D19-207ENST00000478503 LRPPRCP42704 1394 aaKnown RBP7.92□□□□□ -1.14
SH3D19-207ENST00000478503 KANK1Q14678 1352 aa7.92□□□□□ -1.14
SH3D19-207ENST00000478503 APAF1O14727 1248 aa7.92□□□□□ -1.14
SH3D19-207ENST00000478503 SLC12A5Q9H2X9 1139 aa7.92□□□□□ -1.14
SH3D19-207ENST00000478503 DUOX2Q9NRD8 1548 aa7.92□□□□□ -1.14
SH3D19-207ENST00000478503 ZCCHC11Q5TAX3 1644 aaKnown RBP7.92□□□□□ -1.14
SH3D19-207ENST00000478503 ERICH6BQ5W0A0 696 aa7.92□□□□□ -1.14
SH3D19-207ENST00000478503 CYB5RLQ6IPT4 315 aa7.92□□□□□ -1.14
SH3D19-207ENST00000478503 WASHC2CQ9Y4E1 1318 aa7.92□□□□□ -1.14
SH3D19-207ENST00000478503 ADGRL1O94910 1474 aa7.91□□□□□ -1.14
SH3D19-207ENST00000478503 KDM4AO75164 1064 aa7.91□□□□□ -1.14
SH3D19-207ENST00000478503 OSCARQ8IYS5 282 aa7.91□□□□□ -1.14
SH3D19-207ENST00000478503 CFAP65Q6ZU64 1925 aaKnown RBP7.91□□□□□ -1.14
SH3D19-207ENST00000478503 RSPH6AQ9H0K4 717 aa7.91□□□□□ -1.14
SH3D19-207ENST00000478503 NAP1L2Q9ULW6 460 aaPredicted RBP7.91□□□□□ -1.14
SH3D19-207ENST00000478503 MAGI2Q86UL8 1455 aa7.91□□□□□ -1.14
SH3D19-207ENST00000478503 CARD14Q9BXL6 1004 aa7.91□□□□□ -1.14
SH3D19-207ENST00000478503 ASXL2Q76L83 1435 aa7.9□□□□□ -1.14
SH3D19-207ENST00000478503 MYO5CQ9NQX4 1742 aa7.9□□□□□ -1.14
SH3D19-207ENST00000478503 FAM177A1Q8N128 213 aaPredicted RBP7.9□□□□□ -1.14
SH3D19-207ENST00000478503 SPINK5Q9NQ38 1064 aaPredicted RBP7.9□□□□□ -1.14
SH3D19-207ENST00000478503 GPRASP1Q5JY77 1395 aa7.9□□□□□ -1.14
SH3D19-207ENST00000478503 COL17A1Q9UMD9 1497 aaPredicted RBP7.9□□□□□ -1.14
SH3D19-207ENST00000478503 MLECQ14165 292 aa7.9□□□□□ -1.15
SH3D19-207ENST00000478503 DMRT2Q9Y5R5 561 aa7.9□□□□□ -1.15
SH3D19-207ENST00000478503 ATP10AO60312 1499 aa7.9□□□□□ -1.15
SH3D19-207ENST00000478503 C1orf115Q9H7X2 142 aa7.89□□□□□ -1.15
SH3D19-207ENST00000478503 WDR7Q9Y4E6 1490 aa7.89□□□□□ -1.15
SH3D19-207ENST00000478503 TRPM1Q7Z4N2 1603 aa7.89□□□□□ -1.15
SH3D19-207ENST00000478503 ZMYND15Q9H091 742 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms