RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
APTX-222ENST00000478279 CHD2O14647 1828 aaKnown RBP16.67■□□□□ 0.26
APTX-222ENST00000478279 SPATA31A6Q5VVP1 1343 aa16.67■□□□□ 0.26
APTX-222ENST00000478279 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
APTX-222ENST00000478279 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
APTX-222ENST00000478279 ANKRD30AQ9BXX3 1397 aa16.66■□□□□ 0.26
APTX-222ENST00000478279 ZNF772Q68DY9 489 aaPredicted RBP16.66■□□□□ 0.26
APTX-222ENST00000478279 PLEKHG1Q9ULL1 1385 aa16.65■□□□□ 0.26
APTX-222ENST00000478279 FGD6Q6ZV73 1430 aa16.65■□□□□ 0.26
APTX-222ENST00000478279 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
APTX-222ENST00000478279 CHIC2Q9UKJ5 165 aa16.65■□□□□ 0.26
APTX-222ENST00000478279 NCOA3Q9Y6Q9 1424 aa16.64■□□□□ 0.25
APTX-222ENST00000478279 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
APTX-222ENST00000478279 TBX22Q9Y458 520 aa16.64■□□□□ 0.25
APTX-222ENST00000478279 LRP6O75581 1613 aa16.63■□□□□ 0.25
APTX-222ENST00000478279 ZFYVE9O95405 1425 aa16.63■□□□□ 0.25
APTX-222ENST00000478279 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
APTX-222ENST00000478279 TRIM52Q96A61 297 aa16.62■□□□□ 0.25
APTX-222ENST00000478279 RIMS2Q9UQ26 1411 aa16.62■□□□□ 0.25
APTX-222ENST00000478279 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
APTX-222ENST00000478279 CADPS2Q86UW7 1296 aa16.61■□□□□ 0.25
APTX-222ENST00000478279 RPRD2Q5VT52 1461 aaKnown RBP16.61■□□□□ 0.25
APTX-222ENST00000478279 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
APTX-222ENST00000478279 MYO5BQ9ULV0 1848 aa16.59■□□□□ 0.25
APTX-222ENST00000478279 LOC105371045A0A1W2PR82 267 aa16.59■□□□□ 0.25
APTX-222ENST00000478279 RXRBP28702 533 aa16.59■□□□□ 0.25
APTX-222ENST00000478279 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
APTX-222ENST00000478279 ATF3P18847 181 aa16.58■□□□□ 0.24
APTX-222ENST00000478279 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
APTX-222ENST00000478279 SHPRHQ149N8 1683 aa16.58■□□□□ 0.24
APTX-222ENST00000478279 APLP2Q06481 763 aa16.57■□□□□ 0.24
APTX-222ENST00000478279 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
APTX-222ENST00000478279 GCC2Q8IWJ2 1684 aa16.56■□□□□ 0.24
APTX-222ENST00000478279 TMEM131LA2VDJ0 1609 aa16.56■□□□□ 0.24
APTX-222ENST00000478279 ADGRL2O95490 1459 aa16.55■□□□□ 0.24
APTX-222ENST00000478279 ADAMTS13Q76LX8 1427 aa16.55■□□□□ 0.24
APTX-222ENST00000478279 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
APTX-222ENST00000478279 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
APTX-222ENST00000478279 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
APTX-222ENST00000478279 CHGAP10645 457 aaKnown RBP16.53■□□□□ 0.24
APTX-222ENST00000478279 BRINP3Q76B58 766 aa16.53■□□□□ 0.24
APTX-222ENST00000478279 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
APTX-222ENST00000478279 DIP2AQ14689 1571 aa16.52■□□□□ 0.24
APTX-222ENST00000478279 NUTM2BA6NNL0 878 aaPredicted RBP16.52■□□□□ 0.24
APTX-222ENST00000478279 NUTM2EB1AL46 878 aaPredicted RBP16.52■□□□□ 0.24
APTX-222ENST00000478279 NUTM2AQ8IVF1 878 aaPredicted RBP16.52■□□□□ 0.24
APTX-222ENST00000478279 NUTM2DQ5VT03 806 aaPredicted RBP16.51■□□□□ 0.23
APTX-222ENST00000478279 AFF2P51816 1311 aa16.5■□□□□ 0.23
APTX-222ENST00000478279 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
APTX-222ENST00000478279 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
APTX-222ENST00000478279 DCCP43146 1447 aa16.47■□□□□ 0.23
APTX-222ENST00000478279 PTPRUQ92729 1446 aa16.47■□□□□ 0.23
APTX-222ENST00000478279 TRPM2O94759 1503 aa16.47■□□□□ 0.23
APTX-222ENST00000478279 FAM50AQ14320 339 aaKnown RBP16.46■□□□□ 0.23
APTX-222ENST00000478279 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
APTX-222ENST00000478279 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
APTX-222ENST00000478279 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
APTX-222ENST00000478279 QTRT2Q9H974 415 aaKnown RBP16.45■□□□□ 0.22
APTX-222ENST00000478279 E9PCH4 1651 aa16.43■□□□□ 0.22
APTX-222ENST00000478279 UNC13BO14795 1591 aa16.43■□□□□ 0.22
APTX-222ENST00000478279 C8orf37Q96NL8 207 aa16.43■□□□□ 0.22
APTX-222ENST00000478279 NHSL1Q5SYE7 1610 aa16.43■□□□□ 0.22
APTX-222ENST00000478279 RGS12O14924 1447 aa16.43■□□□□ 0.22
APTX-222ENST00000478279 MST1RQ04912 1400 aa16.43■□□□□ 0.22
APTX-222ENST00000478279 XRN1Q8IZH2 1706 aaKnown RBP16.4■□□□□ 0.22
APTX-222ENST00000478279 PNPLA6Q8IY17 1366 aa16.39■□□□□ 0.21
APTX-222ENST00000478279 DDX17Q92841 729 aaKnown RBP16.39■□□□□ 0.21
APTX-222ENST00000478279 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
APTX-222ENST00000478279 IQGAP3Q86VI3 1631 aa16.37■□□□□ 0.21
APTX-222ENST00000478279 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
APTX-222ENST00000478279 SETBP1Q9Y6X0 1596 aa16.37■□□□□ 0.21
APTX-222ENST00000478279 NUP155O75694 1391 aa16.36■□□□□ 0.21
APTX-222ENST00000478279 METP08581 1390 aa16.36■□□□□ 0.21
APTX-222ENST00000478279 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
APTX-222ENST00000478279 ADAMTS2O95450 1211 aa16.35■□□□□ 0.21
APTX-222ENST00000478279 ATAD2Q6PL18 1390 aa16.35■□□□□ 0.21
APTX-222ENST00000478279 ROCK1Q13464 1354 aa16.34■□□□□ 0.21
APTX-222ENST00000478279 FOXD1Q16676 465 aa16.33■□□□□ 0.2
APTX-222ENST00000478279 ZNF326Q5BKZ1 582 aaKnown RBP16.33■□□□□ 0.2
APTX-222ENST00000478279 USP21Q9UK80 565 aa16.32■□□□□ 0.2
APTX-222ENST00000478279 TRPC5Q9UL62 973 aaPredicted RBP16.32■□□□□ 0.2
APTX-222ENST00000478279 EP400Q96L91 3159 aa16.32■□□□□ 0.2
APTX-222ENST00000478279 C1orf167Q5SNV9 1468 aa16.31■□□□□ 0.2
APTX-222ENST00000478279 SOS2Q07890 1332 aaPredicted RBP16.3■□□□□ 0.2
APTX-222ENST00000478279 FNBP4Q8N3X1 1017 aaPredicted RBP16.3■□□□□ 0.2
APTX-222ENST00000478279 ZRANB1Q9UGI0 708 aa16.3■□□□□ 0.2
APTX-222ENST00000478279 NALCNQ8IZF0 1738 aa16.3■□□□□ 0.2
APTX-222ENST00000478279 LAMC1P11047 1609 aa16.29■□□□□ 0.2
APTX-222ENST00000478279 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
APTX-222ENST00000478279 SPHKAPQ2M3C7 1700 aa16.28■□□□□ 0.2
APTX-222ENST00000478279 ORAI2Q96SN7 254 aa16.27■□□□□ 0.2
APTX-222ENST00000478279 ATRNO75882 1429 aa16.26■□□□□ 0.19
APTX-222ENST00000478279 CCDC125Q86Z20 511 aa16.25■□□□□ 0.19
APTX-222ENST00000478279 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
APTX-222ENST00000478279 ROBO2Q9HCK4 1378 aa16.22■□□□□ 0.19
APTX-222ENST00000478279 COL22A1Q8NFW1 1626 aaPredicted RBP16.21■□□□□ 0.19
APTX-222ENST00000478279 ITGAEP38570 1179 aa16.21■□□□□ 0.19
APTX-222ENST00000478279 MYOM2P54296 1465 aa16.2■□□□□ 0.18
APTX-222ENST00000478279 CLTCL1P53675 1640 aa16.19■□□□□ 0.18
APTX-222ENST00000478279 BCL9LQ86UU0 1499 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms