RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 HDGFP51858 240 aaKnown RBP26.44■■□□□ 1.82
PLOD3-213ENST00000478264 ANKLE2Q86XL3 938 aa26.44■■□□□ 1.82
PLOD3-213ENST00000478264 SIN3AQ96ST3 1273 aa26.44■■□□□ 1.82
PLOD3-213ENST00000478264 EID1Q9Y6B2 187 aa26.44■■□□□ 1.82
PLOD3-213ENST00000478264 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.43■■□□□ 1.82
PLOD3-213ENST00000478264 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
PLOD3-213ENST00000478264 RGL3Q3MIN7 710 aa26.42■■□□□ 1.82
PLOD3-213ENST00000478264 PPLO60437 1756 aa26.41■■□□□ 1.82
PLOD3-213ENST00000478264 TXNDC2Q86VQ3 553 aa26.41■■□□□ 1.82
PLOD3-213ENST00000478264 IFT172Q9UG01 1749 aa26.41■■□□□ 1.82
PLOD3-213ENST00000478264 LTKP29376 864 aa26.4■■□□□ 1.82
PLOD3-213ENST00000478264 MED14O60244 1454 aa26.4■■□□□ 1.82
PLOD3-213ENST00000478264 NCKAP5LQ9HCH0 1330 aa26.39■■□□□ 1.82
PLOD3-213ENST00000478264 NEUROD1Q13562 356 aa26.39■■□□□ 1.82
PLOD3-213ENST00000478264 PPP1R15AO75807 674 aaPredicted RBP26.38■■□□□ 1.81
PLOD3-213ENST00000478264 NPHP4O75161 1426 aaPredicted RBP26.36■■□□□ 1.81
PLOD3-213ENST00000478264 PLEKHG1Q9ULL1 1385 aa26.35■■□□□ 1.81
PLOD3-213ENST00000478264 IQGAP1P46940 1657 aa26.35■■□□□ 1.81
PLOD3-213ENST00000478264 MYOM2P54296 1465 aa26.35■■□□□ 1.81
PLOD3-213ENST00000478264 NUTM2DQ5VT03 806 aaPredicted RBP26.34■■□□□ 1.81
PLOD3-213ENST00000478264 VGFO15240 615 aaPredicted RBP26.33■■□□□ 1.81
PLOD3-213ENST00000478264 DMRT2Q9Y5R5 561 aa26.31■■□□□ 1.8
PLOD3-213ENST00000478264 TONSLQ96HA7 1378 aa26.31■■□□□ 1.8
PLOD3-213ENST00000478264 STAC3Q96MF2 364 aa26.3■■□□□ 1.8
PLOD3-213ENST00000478264 SETBP1Q9Y6X0 1596 aa26.29■■□□□ 1.8
PLOD3-213ENST00000478264 DCAF11Q8TEB1 546 aa26.28■■□□□ 1.8
PLOD3-213ENST00000478264 NRXN1Q9ULB1 1477 aa26.28■■□□□ 1.8
PLOD3-213ENST00000478264 NRXN3Q9Y4C0 1643 aa26.26■■□□□ 1.79
PLOD3-213ENST00000478264 DIP2AQ14689 1571 aa26.26■■□□□ 1.79
PLOD3-213ENST00000478264 ADGRF5Q8IZF2 1346 aa26.26■■□□□ 1.79
PLOD3-213ENST00000478264 L3MBTL2Q969R5 705 aa26.26■■□□□ 1.79
PLOD3-213ENST00000478264 PIK3C2GO75747 1445 aa26.25■■□□□ 1.79
PLOD3-213ENST00000478264 BCANQ96GW7 911 aa26.25■■□□□ 1.79
PLOD3-213ENST00000478264 ADAMTS13Q76LX8 1427 aa26.23■■□□□ 1.79
PLOD3-213ENST00000478264 KDM2AQ9Y2K7 1162 aa26.22■■□□□ 1.79
PLOD3-213ENST00000478264 TIMELESSQ9UNS1 1208 aa26.21■■□□□ 1.79
PLOD3-213ENST00000478264 LAMC1P11047 1609 aa26.19■■□□□ 1.78
PLOD3-213ENST00000478264 SENP3Q9H4L4 574 aaPredicted RBP26.19■■□□□ 1.78
PLOD3-213ENST00000478264 ALKQ9UM73 1620 aa26.18■■□□□ 1.78
PLOD3-213ENST00000478264 SLC26A8Q96RN1 970 aa26.18■■□□□ 1.78
PLOD3-213ENST00000478264 SETD1AO15047 1707 aaKnown RBP26.17■■□□□ 1.78
PLOD3-213ENST00000478264 PRAG1Q86YV5 1406 aa26.17■■□□□ 1.78
PLOD3-213ENST00000478264 TBX22Q9Y458 520 aa26.17■■□□□ 1.78
PLOD3-213ENST00000478264 PIK3R4Q99570 1358 aa26.13■■□□□ 1.77
PLOD3-213ENST00000478264 C14orf93Q9H972 538 aaKnown RBP26.11■■□□□ 1.77
PLOD3-213ENST00000478264 KIAA1210Q9ULL0 1709 aa26.11■■□□□ 1.77
PLOD3-213ENST00000478264 METP08581 1390 aa26.09■■□□□ 1.77
PLOD3-213ENST00000478264 NWD1Q149M9 1564 aa26.09■■□□□ 1.77
PLOD3-213ENST00000478264 ASXL1Q8IXJ9 1541 aa26.09■■□□□ 1.77
PLOD3-213ENST00000478264 CFAP70Q5T0N1 1121 aa26.08■■□□□ 1.77
PLOD3-213ENST00000478264 CHD2O14647 1828 aaKnown RBP26.06■■□□□ 1.76
PLOD3-213ENST00000478264 ZNF335Q9H4Z2 1342 aaPredicted RBP26.06■■□□□ 1.76
PLOD3-213ENST00000478264 TRPM1Q7Z4N2 1603 aa26.06■■□□□ 1.76
PLOD3-213ENST00000478264 ADGRB1O14514 1584 aa26.05■■□□□ 1.76
PLOD3-213ENST00000478264 PTPRUQ92729 1446 aa26.04■■□□□ 1.76
PLOD3-213ENST00000478264 XRN1Q8IZH2 1706 aaKnown RBP26.03■■□□□ 1.76
PLOD3-213ENST00000478264 KCNA6P17658 529 aa26.03■■□□□ 1.76
PLOD3-213ENST00000478264 NBPF8Q3BBV2 869 aa26.02■■□□□ 1.76
PLOD3-213ENST00000478264 NKTRP30414 1462 aaKnown RBP26.02■■□□□ 1.76
PLOD3-213ENST00000478264 STRCP1A6NGW2 1772 aa26.02■■□□□ 1.76
PLOD3-213ENST00000478264 CPS1P31327 1500 aa26.01■■□□□ 1.75
PLOD3-213ENST00000478264 RALGAPBQ86X10 1494 aa26■■□□□ 1.75
PLOD3-213ENST00000478264 ILDR1Q86SU0 546 aaPredicted RBP26■■□□□ 1.75
PLOD3-213ENST00000478264 LTBP4Q8N2S1 1624 aa25.99■■□□□ 1.75
PLOD3-213ENST00000478264 YTHDC2Q9H6S0 1430 aaKnown RBP25.99■■□□□ 1.75
PLOD3-213ENST00000478264 LRPPRCP42704 1394 aaKnown RBP25.99■■□□□ 1.75
PLOD3-213ENST00000478264 TMEM132EQ6IEE7 984 aa25.99■■□□□ 1.75
PLOD3-213ENST00000478264 AMOTL2Q9Y2J4 779 aa25.99■■□□□ 1.75
PLOD3-213ENST00000478264 KNDC1Q76NI1 1749 aa25.99■■□□□ 1.75
PLOD3-213ENST00000478264 TECPR2O15040 1411 aa25.97■■□□□ 1.75
PLOD3-213ENST00000478264 PTCH1Q13635 1447 aa25.97■■□□□ 1.75
PLOD3-213ENST00000478264 ROCK2O75116 1388 aaKnown RBP25.96■■□□□ 1.75
PLOD3-213ENST00000478264 NBPF1Q3BBV0 1214 aa25.95■■□□□ 1.74
PLOD3-213ENST00000478264 GPRASP1Q5JY77 1395 aa25.95■■□□□ 1.74
PLOD3-213ENST00000478264 ABCC11Q96J66 1382 aa25.95■■□□□ 1.74
PLOD3-213ENST00000478264 DLC1Q96QB1 1528 aa25.92■■□□□ 1.74
PLOD3-213ENST00000478264 STK26Q9P289 416 aa25.91■■□□□ 1.74
PLOD3-213ENST00000478264 LRRC7Q96NW7 1537 aa25.91■■□□□ 1.74
PLOD3-213ENST00000478264 ROBO2Q9HCK4 1378 aa25.89■■□□□ 1.74
PLOD3-213ENST00000478264 FAM135BQ49AJ0 1406 aa25.88■■□□□ 1.73
PLOD3-213ENST00000478264 PROSER2Q86WR7 435 aaPredicted RBP25.87■■□□□ 1.73
PLOD3-213ENST00000478264 TRAK1Q9UPV9 953 aa25.87■■□□□ 1.73
PLOD3-213ENST00000478264 ARHGEF28Q8N1W1 1705 aaKnown RBP25.87■■□□□ 1.73
PLOD3-213ENST00000478264 SIRT1Q96EB6 747 aa25.86■■□□□ 1.73
PLOD3-213ENST00000478264 CARD11Q9BXL7 1154 aa25.86■■□□□ 1.73
PLOD3-213ENST00000478264 NCOA3Q9Y6Q9 1424 aa25.86■■□□□ 1.73
PLOD3-213ENST00000478264 TMEM94Q12767 1356 aa25.85■■□□□ 1.73
PLOD3-213ENST00000478264 IQSEC2Q5JU85 1478 aa25.83■■□□□ 1.73
PLOD3-213ENST00000478264 XIRP1Q702N8 1843 aaKnown RBP25.82■■□□□ 1.72
PLOD3-213ENST00000478264 EIF3AQ14152 1382 aaKnown RBP25.82■■□□□ 1.72
PLOD3-213ENST00000478264 PRAM1Q96QH2 718 aa25.8■■□□□ 1.72
PLOD3-213ENST00000478264 PLEKHH1Q9ULM0 1364 aa25.8■■□□□ 1.72
PLOD3-213ENST00000478264 ZEB1P37275 1124 aaPredicted RBP25.79■■□□□ 1.72
PLOD3-213ENST00000478264 WAPLQ7Z5K2 1190 aa25.78■■□□□ 1.72
PLOD3-213ENST00000478264 RBM33Q96EV2 1170 aaKnown RBP25.78■■□□□ 1.72
PLOD3-213ENST00000478264 POGKQ9P215 609 aa25.78■■□□□ 1.72
PLOD3-213ENST00000478264 ADGRL3Q9HAR2 1447 aa25.78■■□□□ 1.72
PLOD3-213ENST00000478264 NALCNQ8IZF0 1738 aa25.77■■□□□ 1.72
PLOD3-213ENST00000478264 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
PLOD3-213ENST00000478264 C14orf37Q86TY3 774 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms