RNA–Protein interactions for RNA: ENST00000478171.1

PLXNB1-214, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-214ENST00000478171 KCNA6P17658 529 aa25.08■■□□□ 1.61
PLXNB1-214ENST00000478171 SLC52A1Q9NWF4 448 aa25.07■■□□□ 1.6
PLXNB1-214ENST00000478171 TMEM131LA2VDJ0 1609 aa25.06■■□□□ 1.6
PLXNB1-214ENST00000478171 NKTRP30414 1462 aaKnown RBP25.06■■□□□ 1.6
PLXNB1-214ENST00000478171 RIMS2Q9UQ26 1411 aa25.05■■□□□ 1.6
PLXNB1-214ENST00000478171 E9PCH4 1651 aa25.04■■□□□ 1.6
PLXNB1-214ENST00000478171 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
PLXNB1-214ENST00000478171 BCANQ96GW7 911 aa25.04■■□□□ 1.6
PLXNB1-214ENST00000478171 ROBO1Q9Y6N7 1651 aa25.04■■□□□ 1.6
PLXNB1-214ENST00000478171 FAM135BQ49AJ0 1406 aa25.03■■□□□ 1.6
PLXNB1-214ENST00000478171 PLEKHG1Q9ULL1 1385 aa25.02■■□□□ 1.6
PLXNB1-214ENST00000478171 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
PLXNB1-214ENST00000478171 ROCK1Q13464 1354 aa25■■□□□ 1.59
PLXNB1-214ENST00000478171 CHGAP10645 457 aaKnown RBP24.99■■□□□ 1.59
PLXNB1-214ENST00000478171 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
PLXNB1-214ENST00000478171 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
PLXNB1-214ENST00000478171 ITGAEP38570 1179 aa24.98■■□□□ 1.59
PLXNB1-214ENST00000478171 NUTM2DQ5VT03 806 aaPredicted RBP24.98■■□□□ 1.59
PLXNB1-214ENST00000478171 RGS17Q9UGC6 210 aaPredicted RBP24.95■■□□□ 1.58
PLXNB1-214ENST00000478171 CHD2O14647 1828 aaKnown RBP24.95■■□□□ 1.58
PLXNB1-214ENST00000478171 MSH6P52701 1360 aa24.94■■□□□ 1.58
PLXNB1-214ENST00000478171 ADAMTS13Q76LX8 1427 aa24.94■■□□□ 1.58
PLXNB1-214ENST00000478171 NUP155O75694 1391 aa24.92■■□□□ 1.58
PLXNB1-214ENST00000478171 DIP2AQ14689 1571 aa24.88■■□□□ 1.57
PLXNB1-214ENST00000478171 PHLPP1O60346 1717 aa24.87■■□□□ 1.57
PLXNB1-214ENST00000478171 TBX22Q9Y458 520 aa24.86■■□□□ 1.57
PLXNB1-214ENST00000478171 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
PLXNB1-214ENST00000478171 HDGFP51858 240 aaKnown RBP24.84■■□□□ 1.57
PLXNB1-214ENST00000478171 SLAIN2Q9P270 581 aa24.84■■□□□ 1.57
PLXNB1-214ENST00000478171 PTPRUQ92729 1446 aa24.83■■□□□ 1.57
PLXNB1-214ENST00000478171 SPHKAPQ2M3C7 1700 aa24.82■■□□□ 1.56
PLXNB1-214ENST00000478171 COL16A1Q07092 1604 aaPredicted RBP24.82■■□□□ 1.56
PLXNB1-214ENST00000478171 TRPM2O94759 1503 aa24.81■■□□□ 1.56
PLXNB1-214ENST00000478171 POTEAQ6S8J7 498 aa24.81■■□□□ 1.56
PLXNB1-214ENST00000478171 C14orf37Q86TY3 774 aa24.81■■□□□ 1.56
PLXNB1-214ENST00000478171 NRXN3Q9Y4C0 1643 aa24.81■■□□□ 1.56
PLXNB1-214ENST00000478171 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.8■■□□□ 1.56
PLXNB1-214ENST00000478171 PIK3R4Q99570 1358 aa24.77■■□□□ 1.56
PLXNB1-214ENST00000478171 JCADQ9P266 1359 aa24.77■■□□□ 1.56
PLXNB1-214ENST00000478171 NCOA3Q9Y6Q9 1424 aa24.77■■□□□ 1.56
PLXNB1-214ENST00000478171 CLTCL1P53675 1640 aa24.75■■□□□ 1.55
PLXNB1-214ENST00000478171 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
PLXNB1-214ENST00000478171 SETBP1Q9Y6X0 1596 aa24.75■■□□□ 1.55
PLXNB1-214ENST00000478171 LRP6O75581 1613 aa24.75■■□□□ 1.55
PLXNB1-214ENST00000478171 AMOTL2Q9Y2J4 779 aa24.74■■□□□ 1.55
PLXNB1-214ENST00000478171 AHDC1Q5TGY3 1603 aaPredicted RBP24.72■■□□□ 1.55
PLXNB1-214ENST00000478171 SETD1AO15047 1707 aaKnown RBP24.72■■□□□ 1.55
PLXNB1-214ENST00000478171 RRBP1Q9P2E9 1410 aaKnown RBP24.71■■□□□ 1.55
PLXNB1-214ENST00000478171 METP08581 1390 aa24.7■■□□□ 1.55
PLXNB1-214ENST00000478171 ZNF326Q5BKZ1 582 aaKnown RBP24.7■■□□□ 1.54
PLXNB1-214ENST00000478171 NEXMIFQ5QGS0 1516 aa24.7■■□□□ 1.54
PLXNB1-214ENST00000478171 NAIPQ13075 1403 aa24.69■■□□□ 1.54
PLXNB1-214ENST00000478171 ATF3P18847 181 aa24.69■■□□□ 1.54
PLXNB1-214ENST00000478171 CADPS2Q86UW7 1296 aa24.69■■□□□ 1.54
PLXNB1-214ENST00000478171 C19orf44Q9H6X5 657 aa24.69■■□□□ 1.54
PLXNB1-214ENST00000478171 BRINP3Q76B58 766 aa24.65■■□□□ 1.54
PLXNB1-214ENST00000478171 SHPRHQ149N8 1683 aa24.64■■□□□ 1.53
PLXNB1-214ENST00000478171 ASXL1Q8IXJ9 1541 aa24.64■■□□□ 1.53
PLXNB1-214ENST00000478171 DCCP43146 1447 aa24.63■■□□□ 1.53
PLXNB1-214ENST00000478171 MST1RQ04912 1400 aa24.63■■□□□ 1.53
PLXNB1-214ENST00000478171 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
PLXNB1-214ENST00000478171 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
PLXNB1-214ENST00000478171 ADGRL3Q9HAR2 1447 aa24.59■■□□□ 1.53
PLXNB1-214ENST00000478171 MEX3CQ5U5Q3 659 aaKnown RBP24.58■■□□□ 1.53
PLXNB1-214ENST00000478171 NHSL1Q5SYE7 1610 aa24.57■■□□□ 1.52
PLXNB1-214ENST00000478171 KIF1BO60333 1816 aa24.57■■□□□ 1.52
PLXNB1-214ENST00000478171 HFM1A2PYH4 1435 aa24.55■■□□□ 1.52
PLXNB1-214ENST00000478171 NUTM2BA6NNL0 878 aaPredicted RBP24.54■■□□□ 1.52
PLXNB1-214ENST00000478171 NUTM2EB1AL46 878 aaPredicted RBP24.54■■□□□ 1.52
PLXNB1-214ENST00000478171 NUTM2AQ8IVF1 878 aaPredicted RBP24.54■■□□□ 1.52
PLXNB1-214ENST00000478171 DDX17Q92841 729 aaKnown RBP24.54■■□□□ 1.52
PLXNB1-214ENST00000478171 TRIM52Q96A61 297 aa24.54■■□□□ 1.52
PLXNB1-214ENST00000478171 SETD5Q9C0A6 1442 aa24.51■■□□□ 1.51
PLXNB1-214ENST00000478171 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
PLXNB1-214ENST00000478171 PTCH1Q13635 1447 aa24.5■■□□□ 1.51
PLXNB1-214ENST00000478171 SLC4A1APQ9BWU0 796 aaKnown RBP24.47■■□□□ 1.51
PLXNB1-214ENST00000478171 C1orf167Q5SNV9 1468 aa24.46■■□□□ 1.51
PLXNB1-214ENST00000478171 FOXD1Q16676 465 aa24.46■■□□□ 1.51
PLXNB1-214ENST00000478171 ZNF772Q68DY9 489 aaPredicted RBP24.46■■□□□ 1.51
PLXNB1-214ENST00000478171 PPLO60437 1756 aa24.46■■□□□ 1.51
PLXNB1-214ENST00000478171 PNPLA6Q8IY17 1366 aa24.45■■□□□ 1.5
PLXNB1-214ENST00000478171 AFF2P51816 1311 aa24.43■■□□□ 1.5
PLXNB1-214ENST00000478171 VGFO15240 615 aaPredicted RBP24.42■■□□□ 1.5
PLXNB1-214ENST00000478171 PRAG1Q86YV5 1406 aa24.42■■□□□ 1.5
PLXNB1-214ENST00000478171 LRRC59Q96AG4 307 aaKnown RBP24.39■■□□□ 1.49
PLXNB1-214ENST00000478171 C8orf37Q96NL8 207 aa24.38■■□□□ 1.49
PLXNB1-214ENST00000478171 ORAI2Q96SN7 254 aa24.38■■□□□ 1.49
PLXNB1-214ENST00000478171 LAMC1P11047 1609 aa24.38■■□□□ 1.49
PLXNB1-214ENST00000478171 RPGRIP1LQ68CZ1 1315 aa24.37■■□□□ 1.49
PLXNB1-214ENST00000478171 ADGRF5Q8IZF2 1346 aa24.36■■□□□ 1.49
PLXNB1-214ENST00000478171 RXRBP28702 533 aa24.36■■□□□ 1.49
PLXNB1-214ENST00000478171 UPF1Q92900 1129 aaKnown RBP eCLIP24.34■■□□□ 1.49
PLXNB1-214ENST00000478171 CCDC144AA2RUR9 1427 aa24.34■■□□□ 1.49
PLXNB1-214ENST00000478171 RGS12O14924 1447 aa24.34■■□□□ 1.49
PLXNB1-214ENST00000478171 SPATA31E1Q6ZUB1 1445 aa24.33■■□□□ 1.49
PLXNB1-214ENST00000478171 CDK12Q9NYV4 1490 aaPredicted RBP24.32■■□□□ 1.48
PLXNB1-214ENST00000478171 ADAMTS2O95450 1211 aa24.32■■□□□ 1.48
PLXNB1-214ENST00000478171 CDC42BPGQ6DT37 1551 aa24.32■■□□□ 1.48
PLXNB1-214ENST00000478171 RGL3Q3MIN7 710 aa24.31■■□□□ 1.48
PLXNB1-214ENST00000478171 IFT172Q9UG01 1749 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms