RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 PNMA3Q9UL41 463 aa8.29□□□□□ -1.08
CALD1-218ENST00000478075 SMAPO00193 183 aa8.28□□□□□ -1.08
CALD1-218ENST00000478075 RGL2O15211 777 aa8.28□□□□□ -1.08
CALD1-218ENST00000478075 PRSS12P56730 875 aa8.28□□□□□ -1.08
CALD1-218ENST00000478075 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
CALD1-218ENST00000478075 NPAS3Q8IXF0 933 aa8.28□□□□□ -1.08
CALD1-218ENST00000478075 CYP4X1Q8N118 509 aa8.28□□□□□ -1.08
CALD1-218ENST00000478075 IRF7Q92985 503 aa8.28□□□□□ -1.08
CALD1-218ENST00000478075 MAP3K7O43318 606 aa8.27□□□□□ -1.09
CALD1-218ENST00000478075 MFSD10Q14728 455 aa8.27□□□□□ -1.09
CALD1-218ENST00000478075 HS6ST3Q8IZP7 471 aa8.27□□□□□ -1.09
CALD1-218ENST00000478075 EMILIN3Q9NT22 766 aa8.27□□□□□ -1.09
CALD1-218ENST00000478075 FOXC1Q12948 553 aa8.26□□□□□ -1.09
CALD1-218ENST00000478075 EN1Q05925 392 aaPredicted RBP8.25□□□□□ -1.09
CALD1-218ENST00000478075 TOR4AQ9NXH8 423 aa8.25□□□□□ -1.09
CALD1-218ENST00000478075 PKD2L1Q9P0L9 805 aa8.25□□□□□ -1.09
CALD1-218ENST00000478075 KCNMA1Q12791 1236 aa8.24□□□□□ -1.09
CALD1-218ENST00000478075 ATP13A2Q9NQ11 1180 aa8.24□□□□□ -1.09
CALD1-218ENST00000478075 S1PR4O95977 384 aa8.23□□□□□ -1.09
CALD1-218ENST00000478075 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.1
CALD1-218ENST00000478075 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
CALD1-218ENST00000478075 GMPRP36959 345 aa8.21□□□□□ -1.1
CALD1-218ENST00000478075 RPIAP49247 311 aa8.21□□□□□ -1.1
CALD1-218ENST00000478075 KCTD17Q8N5Z5 321 aa8.21□□□□□ -1.1
CALD1-218ENST00000478075 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
CALD1-218ENST00000478075 NXF1Q9UBU9 619 aaKnown RBP8.21□□□□□ -1.1
CALD1-218ENST00000478075 PPEF1O14829 653 aaPredicted RBP8.2□□□□□ -1.1
CALD1-218ENST00000478075 CD2BP2O95400 341 aaKnown RBP8.2□□□□□ -1.1
CALD1-218ENST00000478075 BLOC1S3Q6QNY0 202 aa8.19□□□□□ -1.1
CALD1-218ENST00000478075 ADH1BP00325 375 aa8.18□□□□□ -1.1
CALD1-218ENST00000478075 TTC24A2A3L6 582 aaPredicted RBP8.17□□□□□ -1.1
CALD1-218ENST00000478075 NBR1Q14596 966 aa8.17□□□□□ -1.1
CALD1-218ENST00000478075 TSR1Q2NL82 804 aaKnown RBP8.17□□□□□ -1.1
CALD1-218ENST00000478075 NUDT18Q6ZVK8 323 aa8.17□□□□□ -1.1
CALD1-218ENST00000478075 TMEM151AQ8N4L1 468 aa8.17□□□□□ -1.1
CALD1-218ENST00000478075 RNF225M0QZC1 329 aaPredicted RBP8.16□□□□□ -1.1
CALD1-218ENST00000478075 SWT1Q5T5J6 900 aaKnown RBP8.16□□□□□ -1.1
CALD1-218ENST00000478075 DDX12PQ92771 950 aa8.16□□□□□ -1.1
CALD1-218ENST00000478075 SLC6A16Q9GZN6 736 aa8.16□□□□□ -1.1
CALD1-218ENST00000478075 TLL1O43897 1013 aa8.15□□□□□ -1.1
CALD1-218ENST00000478075 DNAJC5Q9H3Z4 198 aa8.15□□□□□ -1.1
CALD1-218ENST00000478075 FAM198AQ9UFP1 575 aa8.14□□□□□ -1.11
CALD1-218ENST00000478075 KMT5BQ4FZB7 885 aa8.13□□□□□ -1.11
CALD1-218ENST00000478075 XP32Q5T750 250 aa8.13□□□□□ -1.11
CALD1-218ENST00000478075 NR1I2O75469 434 aa8.12□□□□□ -1.11
CALD1-218ENST00000478075 IGHA1P01876 353 aa8.12□□□□□ -1.11
CALD1-218ENST00000478075 GDF11O95390 407 aa8.1□□□□□ -1.11
CALD1-218ENST00000478075 PLA2G2CQ5R387 149 aa8.1□□□□□ -1.11
CALD1-218ENST00000478075 DPYSL4O14531 572 aa8.09□□□□□ -1.11
CALD1-218ENST00000478075 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
CALD1-218ENST00000478075 C3orf80F5H4A9 247 aa8.07□□□□□ -1.12
CALD1-218ENST00000478075 H3BM21 787 aa8.07□□□□□ -1.12
CALD1-218ENST00000478075 ACTN4O43707 911 aaKnown RBP8.07□□□□□ -1.12
CALD1-218ENST00000478075 CAMK2BQ13554 666 aa8.07□□□□□ -1.12
CALD1-218ENST00000478075 PKD2Q13563 968 aa8.07□□□□□ -1.12
CALD1-218ENST00000478075 SNIP1Q8TAD8 396 aaKnown RBP8.07□□□□□ -1.12
CALD1-218ENST00000478075 RASSF7Q02833 373 aa8.05□□□□□ -1.12
CALD1-218ENST00000478075 CHGAP10645 457 aaKnown RBP8.03□□□□□ -1.12
CALD1-218ENST00000478075 SMPD1P17405 629 aa8.03□□□□□ -1.12
CALD1-218ENST00000478075 GSK3AP49840 483 aa8.03□□□□□ -1.12
CALD1-218ENST00000478075 FOXK2Q01167 660 aa8.03□□□□□ -1.12
CALD1-218ENST00000478075 SPDYE16A6NNV3 312 aaPredicted RBP8.02□□□□□ -1.13
CALD1-218ENST00000478075 WNT7AO00755 349 aa8.01□□□□□ -1.13
CALD1-218ENST00000478075 ZBTB24O43167 697 aaPredicted RBP8.01□□□□□ -1.13
CALD1-218ENST00000478075 PDIA6Q15084 440 aa7.99□□□□□ -1.13
CALD1-218ENST00000478075 NKX1-1Q15270 411 aaPredicted RBP7.99□□□□□ -1.13
CALD1-218ENST00000478075 REPIN1Q9BWE0 567 aaKnown RBP7.99□□□□□ -1.13
CALD1-218ENST00000478075 DNMT3AQ9Y6K1 912 aaPredicted RBP7.99□□□□□ -1.13
CALD1-218ENST00000478075 TTC13Q8NBP0 860 aa7.98□□□□□ -1.13
CALD1-218ENST00000478075 PSMG3-AS1Q96PY0 264 aa7.98□□□□□ -1.13
CALD1-218ENST00000478075 SPSB2Q99619 263 aa7.98□□□□□ -1.13
CALD1-218ENST00000478075 ERBB4Q15303 1308 aa7.97□□□□□ -1.13
CALD1-218ENST00000478075 GPAT2Q6NUI2 795 aa7.96□□□□□ -1.14
CALD1-218ENST00000478075 FCF1Q9Y324 198 aaKnown RBP7.96□□□□□ -1.14
CALD1-218ENST00000478075 CFHP08603 1231 aa7.95□□□□□ -1.14
CALD1-218ENST00000478075 VSIG8P0DPA2 414 aa7.94□□□□□ -1.14
CALD1-218ENST00000478075 DNAJB2P25686 324 aa7.94□□□□□ -1.14
CALD1-218ENST00000478075 SCUBE3Q8IX30 993 aa7.94□□□□□ -1.14
CALD1-218ENST00000478075 EYA1Q99502 592 aa7.94□□□□□ -1.14
CALD1-218ENST00000478075 VEGFBP49765 207 aa7.92□□□□□ -1.14
CALD1-218ENST00000478075 PADI6Q6TGC4 694 aa7.91□□□□□ -1.14
CALD1-218ENST00000478075 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
CALD1-218ENST00000478075 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.9□□□□□ -1.14
CALD1-218ENST00000478075 J3QL48 77 aa7.9□□□□□ -1.14
CALD1-218ENST00000478075 HPS1Q92902 700 aa7.9□□□□□ -1.14
CALD1-218ENST00000478075 RSPH4AQ5TD94 716 aa7.89□□□□□ -1.15
CALD1-218ENST00000478075 TMEM134Q9H6X4 195 aa7.88□□□□□ -1.15
CALD1-218ENST00000478075 KANK3Q6NY19 840 aa7.87□□□□□ -1.15
CALD1-218ENST00000478075 MRGPRX2Q96LB1 330 aa7.87□□□□□ -1.15
CALD1-218ENST00000478075 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
CALD1-218ENST00000478075 RBM46Q8TBY0 533 aaKnown RBP7.86□□□□□ -1.15
CALD1-218ENST00000478075 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
CALD1-218ENST00000478075 GRXCR2A6NFK2 248 aa7.85□□□□□ -1.15
CALD1-218ENST00000478075 ADAM23O75077 832 aa7.85□□□□□ -1.15
CALD1-218ENST00000478075 CDHR5Q9HBB8 845 aa7.85□□□□□ -1.15
CALD1-218ENST00000478075 ADAMTS8Q9UP79 889 aa7.85□□□□□ -1.15
CALD1-218ENST00000478075 GTPBP6O43824 516 aaPredicted RBP7.84□□□□□ -1.15
CALD1-218ENST00000478075 TRIM32Q13049 653 aa7.83□□□□□ -1.16
CALD1-218ENST00000478075 CAPN5O15484 640 aaPredicted RBP7.8□□□□□ -1.16
CALD1-218ENST00000478075 FMNL1O95466 1100 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms