RNA–Protein interactions for RNA: ENST00000477991.1

SCUBE1-206, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 3

Gene SCUBE1, Length 489 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-206ENST00000477991 IQGAP3Q86VI3 1631 aa16.04■□□□□ 0.16
SCUBE1-206ENST00000477991 SLC26A8Q96RN1 970 aa16.02■□□□□ 0.16
SCUBE1-206ENST00000477991 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
SCUBE1-206ENST00000477991 NKTRP30414 1462 aaKnown RBP16.01■□□□□ 0.15
SCUBE1-206ENST00000477991 FAM135BQ49AJ0 1406 aa16.01■□□□□ 0.15
SCUBE1-206ENST00000477991 CHD2O14647 1828 aaKnown RBP16.01■□□□□ 0.15
SCUBE1-206ENST00000477991 PLEKHG1Q9ULL1 1385 aa16■□□□□ 0.15
SCUBE1-206ENST00000477991 RIMS2Q9UQ26 1411 aa15.99■□□□□ 0.15
SCUBE1-206ENST00000477991 HDGFP51858 240 aaKnown RBP15.97■□□□□ 0.15
SCUBE1-206ENST00000477991 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
SCUBE1-206ENST00000477991 TBX22Q9Y458 520 aa15.95■□□□□ 0.14
SCUBE1-206ENST00000477991 ROBO1Q9Y6N7 1651 aa15.95■□□□□ 0.14
SCUBE1-206ENST00000477991 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.94■□□□□ 0.14
SCUBE1-206ENST00000477991 NUP155O75694 1391 aa15.94■□□□□ 0.14
SCUBE1-206ENST00000477991 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
SCUBE1-206ENST00000477991 NCOA3Q9Y6Q9 1424 aa15.93■□□□□ 0.14
SCUBE1-206ENST00000477991 DIP2AQ14689 1571 aa15.92■□□□□ 0.14
SCUBE1-206ENST00000477991 RBM33Q96EV2 1170 aaKnown RBP15.92■□□□□ 0.14
SCUBE1-206ENST00000477991 PIK3R4Q99570 1358 aa15.91■□□□□ 0.14
SCUBE1-206ENST00000477991 PPP1R15AO75807 674 aaPredicted RBP15.91■□□□□ 0.14
SCUBE1-206ENST00000477991 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
SCUBE1-206ENST00000477991 MSH6P52701 1360 aa15.9■□□□□ 0.14
SCUBE1-206ENST00000477991 BCANQ96GW7 911 aa15.9■□□□□ 0.14
SCUBE1-206ENST00000477991 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
SCUBE1-206ENST00000477991 SPHKAPQ2M3C7 1700 aa15.9■□□□□ 0.14
SCUBE1-206ENST00000477991 ITGAEP38570 1179 aa15.89■□□□□ 0.13
SCUBE1-206ENST00000477991 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
SCUBE1-206ENST00000477991 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
SCUBE1-206ENST00000477991 CHGAP10645 457 aaKnown RBP15.88■□□□□ 0.13
SCUBE1-206ENST00000477991 PPARGC1BQ86YN6 1023 aaKnown RBP15.88■□□□□ 0.13
SCUBE1-206ENST00000477991 SLAIN2Q9P270 581 aa15.87■□□□□ 0.13
SCUBE1-206ENST00000477991 NRXN3Q9Y4C0 1643 aa15.86■□□□□ 0.13
SCUBE1-206ENST00000477991 TRPM2O94759 1503 aa15.85■□□□□ 0.13
SCUBE1-206ENST00000477991 SETBP1Q9Y6X0 1596 aa15.85■□□□□ 0.13
SCUBE1-206ENST00000477991 NUTM2DQ5VT03 806 aaPredicted RBP15.85■□□□□ 0.13
SCUBE1-206ENST00000477991 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
SCUBE1-206ENST00000477991 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
SCUBE1-206ENST00000477991 PHLPP1O60346 1717 aa15.84■□□□□ 0.13
SCUBE1-206ENST00000477991 NAIPQ13075 1403 aa15.84■□□□□ 0.13
SCUBE1-206ENST00000477991 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
SCUBE1-206ENST00000477991 C19orf44Q9H6X5 657 aa15.82■□□□□ 0.12
SCUBE1-206ENST00000477991 CLTCL1P53675 1640 aa15.82■□□□□ 0.12
SCUBE1-206ENST00000477991 COL16A1Q07092 1604 aaPredicted RBP15.82■□□□□ 0.12
SCUBE1-206ENST00000477991 AMOTL2Q9Y2J4 779 aa15.81■□□□□ 0.12
SCUBE1-206ENST00000477991 CADPS2Q86UW7 1296 aa15.8■□□□□ 0.12
SCUBE1-206ENST00000477991 NEXMIFQ5QGS0 1516 aa15.79■□□□□ 0.12
SCUBE1-206ENST00000477991 JCADQ9P266 1359 aa15.79■□□□□ 0.12
SCUBE1-206ENST00000477991 KIF1BO60333 1816 aa15.79■□□□□ 0.12
SCUBE1-206ENST00000477991 AHDC1Q5TGY3 1603 aaPredicted RBP15.79■□□□□ 0.12
SCUBE1-206ENST00000477991 DCCP43146 1447 aa15.78■□□□□ 0.12
SCUBE1-206ENST00000477991 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
SCUBE1-206ENST00000477991 METP08581 1390 aa15.76■□□□□ 0.11
SCUBE1-206ENST00000477991 POTEAQ6S8J7 498 aa15.76■□□□□ 0.11
SCUBE1-206ENST00000477991 ATF3P18847 181 aa15.75■□□□□ 0.11
SCUBE1-206ENST00000477991 ZNF326Q5BKZ1 582 aaKnown RBP15.75■□□□□ 0.11
SCUBE1-206ENST00000477991 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
SCUBE1-206ENST00000477991 SHPRHQ149N8 1683 aa15.74■□□□□ 0.11
SCUBE1-206ENST00000477991 SETD1AO15047 1707 aaKnown RBP15.74■□□□□ 0.11
SCUBE1-206ENST00000477991 SPATA31A6Q5VVP1 1343 aa15.72■□□□□ 0.11
SCUBE1-206ENST00000477991 MST1RQ04912 1400 aa15.72■□□□□ 0.11
SCUBE1-206ENST00000477991 BRINP3Q76B58 766 aa15.72■□□□□ 0.11
SCUBE1-206ENST00000477991 LRP6O75581 1613 aa15.71■□□□□ 0.11
SCUBE1-206ENST00000477991 NHSL1Q5SYE7 1610 aa15.71■□□□□ 0.11
SCUBE1-206ENST00000477991 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
SCUBE1-206ENST00000477991 NALCNQ8IZF0 1738 aa15.7■□□□□ 0.1
SCUBE1-206ENST00000477991 PPLO60437 1756 aa15.7■□□□□ 0.1
SCUBE1-206ENST00000477991 PRAG1Q86YV5 1406 aa15.69■□□□□ 0.1
SCUBE1-206ENST00000477991 ASXL1Q8IXJ9 1541 aa15.69■□□□□ 0.1
SCUBE1-206ENST00000477991 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
SCUBE1-206ENST00000477991 VGFO15240 615 aaPredicted RBP15.68■□□□□ 0.1
SCUBE1-206ENST00000477991 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
SCUBE1-206ENST00000477991 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
SCUBE1-206ENST00000477991 TRIM52Q96A61 297 aa15.67■□□□□ 0.1
SCUBE1-206ENST00000477991 SLC4A1APQ9BWU0 796 aaKnown RBP15.67■□□□□ 0.1
SCUBE1-206ENST00000477991 LAMC1P11047 1609 aa15.65■□□□□ 0.1
SCUBE1-206ENST00000477991 ROBO2Q9HCK4 1378 aa15.62■□□□□ 0.09
SCUBE1-206ENST00000477991 C1orf167Q5SNV9 1468 aa15.62■□□□□ 0.09
SCUBE1-206ENST00000477991 ZNF772Q68DY9 489 aaPredicted RBP15.61■□□□□ 0.09
SCUBE1-206ENST00000477991 LRRC59Q96AG4 307 aaKnown RBP15.61■□□□□ 0.09
SCUBE1-206ENST00000477991 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
SCUBE1-206ENST00000477991 IFT172Q9UG01 1749 aa15.6■□□□□ 0.09
SCUBE1-206ENST00000477991 PNPLA6Q8IY17 1366 aa15.59■□□□□ 0.09
SCUBE1-206ENST00000477991 FOXD1Q16676 465 aa15.58■□□□□ 0.08
SCUBE1-206ENST00000477991 MEX3CQ5U5Q3 659 aaKnown RBP15.58■□□□□ 0.08
SCUBE1-206ENST00000477991 DDX17Q92841 729 aaKnown RBP15.57■□□□□ 0.08
SCUBE1-206ENST00000477991 MPHOSPH9Q99550 1183 aa15.57■□□□□ 0.08
SCUBE1-206ENST00000477991 CCDC144AA2RUR9 1427 aa15.57■□□□□ 0.08
SCUBE1-206ENST00000477991 SOS2Q07890 1332 aaPredicted RBP15.56■□□□□ 0.08
SCUBE1-206ENST00000477991 ADGRF5Q8IZF2 1346 aa15.56■□□□□ 0.08
SCUBE1-206ENST00000477991 TECPR2O15040 1411 aa15.56■□□□□ 0.08
SCUBE1-206ENST00000477991 CDC42BPGQ6DT37 1551 aa15.55■□□□□ 0.08
SCUBE1-206ENST00000477991 CDK12Q9NYV4 1490 aaPredicted RBP15.55■□□□□ 0.08
SCUBE1-206ENST00000477991 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
SCUBE1-206ENST00000477991 NUTM2BA6NNL0 878 aaPredicted RBP15.55■□□□□ 0.08
SCUBE1-206ENST00000477991 NUTM2EB1AL46 878 aaPredicted RBP15.55■□□□□ 0.08
SCUBE1-206ENST00000477991 NUTM2AQ8IVF1 878 aaPredicted RBP15.55■□□□□ 0.08
SCUBE1-206ENST00000477991 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
SCUBE1-206ENST00000477991 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
SCUBE1-206ENST00000477991 KNDC1Q76NI1 1749 aa15.54■□□□□ 0.08
SCUBE1-206ENST00000477991 AFF2P51816 1311 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms