RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 E9PCH4 1651 aa21.29■■□□□ 1
PDE6D-204ENST00000477748 ALKQ9UM73 1620 aa21.29■■□□□ 1
PDE6D-204ENST00000477748 HFM1A2PYH4 1435 aa21.27■■□□□ 1
PDE6D-204ENST00000477748 ZFYVE9O95405 1425 aa21.27■■□□□ 1
PDE6D-204ENST00000477748 HDGFP51858 240 aaKnown RBP21.25■□□□□ 0.99
PDE6D-204ENST00000477748 KCNA6P17658 529 aa21.24■□□□□ 0.99
PDE6D-204ENST00000477748 TMEM131LA2VDJ0 1609 aa21.24■□□□□ 0.99
PDE6D-204ENST00000477748 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
PDE6D-204ENST00000477748 RIMS2Q9UQ26 1411 aa21.23■□□□□ 0.99
PDE6D-204ENST00000477748 NKTRP30414 1462 aaKnown RBP21.22■□□□□ 0.99
PDE6D-204ENST00000477748 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
PDE6D-204ENST00000477748 SLC26A8Q96RN1 970 aa21.22■□□□□ 0.99
PDE6D-204ENST00000477748 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.21■□□□□ 0.99
PDE6D-204ENST00000477748 TRIM52Q96A61 297 aa21.21■□□□□ 0.99
PDE6D-204ENST00000477748 NWD1Q149M9 1564 aa21.21■□□□□ 0.99
PDE6D-204ENST00000477748 BCANQ96GW7 911 aa21.2■□□□□ 0.98
PDE6D-204ENST00000477748 TMEM94Q12767 1356 aa21.2■□□□□ 0.98
PDE6D-204ENST00000477748 MYO5BQ9ULV0 1848 aa21.18■□□□□ 0.98
PDE6D-204ENST00000477748 CHGAP10645 457 aaKnown RBP21.18■□□□□ 0.98
PDE6D-204ENST00000477748 XIRP1Q702N8 1843 aaKnown RBP21.17■□□□□ 0.98
PDE6D-204ENST00000477748 SPHKAPQ2M3C7 1700 aa21.15■□□□□ 0.98
PDE6D-204ENST00000477748 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.97
PDE6D-204ENST00000477748 DIP2AQ14689 1571 aa21.14■□□□□ 0.97
PDE6D-204ENST00000477748 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
PDE6D-204ENST00000477748 FAM135BQ49AJ0 1406 aa21.12■□□□□ 0.97
PDE6D-204ENST00000477748 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
PDE6D-204ENST00000477748 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
PDE6D-204ENST00000477748 ADAMTS13Q76LX8 1427 aa21.1■□□□□ 0.97
PDE6D-204ENST00000477748 MSH6P52701 1360 aa21.1■□□□□ 0.97
PDE6D-204ENST00000477748 CHD2O14647 1828 aaKnown RBP21.08■□□□□ 0.96
PDE6D-204ENST00000477748 NCOA3Q9Y6Q9 1424 aa21.07■□□□□ 0.96
PDE6D-204ENST00000477748 TRPM2O94759 1503 aa21.07■□□□□ 0.96
PDE6D-204ENST00000477748 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
PDE6D-204ENST00000477748 NUTM2DQ5VT03 806 aaPredicted RBP21.06■□□□□ 0.96
PDE6D-204ENST00000477748 CLTCL1P53675 1640 aa21.04■□□□□ 0.96
PDE6D-204ENST00000477748 RBM33Q96EV2 1170 aaKnown RBP21.04■□□□□ 0.96
PDE6D-204ENST00000477748 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
PDE6D-204ENST00000477748 SETBP1Q9Y6X0 1596 aa21.02■□□□□ 0.96
PDE6D-204ENST00000477748 KIF1BO60333 1816 aa21.02■□□□□ 0.96
PDE6D-204ENST00000477748 ZNF326Q5BKZ1 582 aaKnown RBP21.01■□□□□ 0.95
PDE6D-204ENST00000477748 MPHOSPH9Q99550 1183 aa21.01■□□□□ 0.95
PDE6D-204ENST00000477748 ROBO1Q9Y6N7 1651 aa21■□□□□ 0.95
PDE6D-204ENST00000477748 FOXD1Q16676 465 aa20.99■□□□□ 0.95
PDE6D-204ENST00000477748 RGS17Q9UGC6 210 aaPredicted RBP20.99■□□□□ 0.95
PDE6D-204ENST00000477748 RAB3GAP2Q9H2M9 1393 aa20.98■□□□□ 0.95
PDE6D-204ENST00000477748 SLAIN2Q9P270 581 aa20.98■□□□□ 0.95
PDE6D-204ENST00000477748 NRXN3Q9Y4C0 1643 aa20.97■□□□□ 0.95
PDE6D-204ENST00000477748 C14orf37Q86TY3 774 aa20.97■□□□□ 0.95
PDE6D-204ENST00000477748 NEXMIFQ5QGS0 1516 aa20.97■□□□□ 0.95
PDE6D-204ENST00000477748 AMOTL2Q9Y2J4 779 aa20.96■□□□□ 0.95
PDE6D-204ENST00000477748 PTPRUQ92729 1446 aa20.95■□□□□ 0.95
PDE6D-204ENST00000477748 CADPS2Q86UW7 1296 aa20.94■□□□□ 0.94
PDE6D-204ENST00000477748 C19orf44Q9H6X5 657 aa20.94■□□□□ 0.94
PDE6D-204ENST00000477748 XRN1Q8IZH2 1706 aaKnown RBP20.93■□□□□ 0.94
PDE6D-204ENST00000477748 DCCP43146 1447 aa20.93■□□□□ 0.94
PDE6D-204ENST00000477748 ATF3P18847 181 aa20.92■□□□□ 0.94
PDE6D-204ENST00000477748 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
PDE6D-204ENST00000477748 METP08581 1390 aa20.9■□□□□ 0.94
PDE6D-204ENST00000477748 RPGRIP1LQ68CZ1 1315 aa20.9■□□□□ 0.94
PDE6D-204ENST00000477748 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.9■□□□□ 0.94
PDE6D-204ENST00000477748 VGFO15240 615 aaPredicted RBP20.88■□□□□ 0.93
PDE6D-204ENST00000477748 PHLPP1O60346 1717 aa20.87■□□□□ 0.93
PDE6D-204ENST00000477748 JCADQ9P266 1359 aa20.86■□□□□ 0.93
PDE6D-204ENST00000477748 HRCP23327 699 aa20.86■□□□□ 0.93
PDE6D-204ENST00000477748 POTEAQ6S8J7 498 aa20.84■□□□□ 0.93
PDE6D-204ENST00000477748 COL16A1Q07092 1604 aaPredicted RBP20.84■□□□□ 0.93
PDE6D-204ENST00000477748 AHDC1Q5TGY3 1603 aaPredicted RBP20.84■□□□□ 0.93
PDE6D-204ENST00000477748 PPLO60437 1756 aa20.83■□□□□ 0.93
PDE6D-204ENST00000477748 PTCH1Q13635 1447 aa20.83■□□□□ 0.93
PDE6D-204ENST00000477748 ADGRL3Q9HAR2 1447 aa20.83■□□□□ 0.93
PDE6D-204ENST00000477748 PRAG1Q86YV5 1406 aa20.82■□□□□ 0.92
PDE6D-204ENST00000477748 RGL3Q3MIN7 710 aa20.82■□□□□ 0.92
PDE6D-204ENST00000477748 MST1RQ04912 1400 aa20.79■□□□□ 0.92
PDE6D-204ENST00000477748 SPATA31E1Q6ZUB1 1445 aa20.79■□□□□ 0.92
PDE6D-204ENST00000477748 BRINP3Q76B58 766 aa20.79■□□□□ 0.92
PDE6D-204ENST00000477748 SETD1AO15047 1707 aaKnown RBP20.78■□□□□ 0.92
PDE6D-204ENST00000477748 ASXL1Q8IXJ9 1541 aa20.78■□□□□ 0.92
PDE6D-204ENST00000477748 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
PDE6D-204ENST00000477748 ANKRD30BQ9BXX2 1392 aa20.76■□□□□ 0.91
PDE6D-204ENST00000477748 IFT172Q9UG01 1749 aa20.75■□□□□ 0.91
PDE6D-204ENST00000477748 NALCNQ8IZF0 1738 aa20.75■□□□□ 0.91
PDE6D-204ENST00000477748 ROBO2Q9HCK4 1378 aa20.74■□□□□ 0.91
PDE6D-204ENST00000477748 SHPRHQ149N8 1683 aa20.73■□□□□ 0.91
PDE6D-204ENST00000477748 ADGRF5Q8IZF2 1346 aa20.73■□□□□ 0.91
PDE6D-204ENST00000477748 NHSL1Q5SYE7 1610 aa20.7■□□□□ 0.9
PDE6D-204ENST00000477748 LRP6O75581 1613 aa20.69■□□□□ 0.9
PDE6D-204ENST00000477748 C1orf167Q5SNV9 1468 aa20.69■□□□□ 0.9
PDE6D-204ENST00000477748 TECPR2O15040 1411 aa20.68■□□□□ 0.9
PDE6D-204ENST00000477748 MEX3CQ5U5Q3 659 aaKnown RBP20.67■□□□□ 0.9
PDE6D-204ENST00000477748 PIK3C2GO75747 1445 aa20.67■□□□□ 0.9
PDE6D-204ENST00000477748 LRRC59Q96AG4 307 aaKnown RBP20.65■□□□□ 0.9
PDE6D-204ENST00000477748 LRPPRCP42704 1394 aaKnown RBP20.64■□□□□ 0.89
PDE6D-204ENST00000477748 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
PDE6D-204ENST00000477748 ZNF772Q68DY9 489 aaPredicted RBP20.63■□□□□ 0.89
PDE6D-204ENST00000477748 MYOM2P54296 1465 aa20.62■□□□□ 0.89
PDE6D-204ENST00000477748 ABCC11Q96J66 1382 aa20.62■□□□□ 0.89
PDE6D-204ENST00000477748 LAMC1P11047 1609 aa20.62■□□□□ 0.89
PDE6D-204ENST00000477748 NRXN1Q9ULB1 1477 aa20.61■□□□□ 0.89
PDE6D-204ENST00000477748 KNDC1Q76NI1 1749 aa20.6■□□□□ 0.89
PDE6D-204ENST00000477748 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms