RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 NRXN1Q9ULB1 1477 aa26.62■■□□□ 1.85
SMIM4-203ENST00000477703 SYNMO15061 1565 aa26.61■■□□□ 1.85
SMIM4-203ENST00000477703 DISP3Q9P2K9 1392 aa26.59■■□□□ 1.85
SMIM4-203ENST00000477703 PPLO60437 1756 aa26.59■■□□□ 1.85
SMIM4-203ENST00000477703 SCAF11Q99590 1463 aaKnown RBP26.58■■□□□ 1.85
SMIM4-203ENST00000477703 AGLP35573 1532 aa26.58■■□□□ 1.85
SMIM4-203ENST00000477703 CFAP70Q5T0N1 1121 aa26.56■■□□□ 1.84
SMIM4-203ENST00000477703 CHGAP10645 457 aaKnown RBP26.55■■□□□ 1.84
SMIM4-203ENST00000477703 RPGRIP1LQ68CZ1 1315 aa26.53■■□□□ 1.84
SMIM4-203ENST00000477703 TMF1P82094 1093 aa26.52■■□□□ 1.84
SMIM4-203ENST00000477703 PREX1Q8TCU6 1659 aa26.52■■□□□ 1.84
SMIM4-203ENST00000477703 PPP6R1Q9UPN7 881 aa26.5■■□□□ 1.83
SMIM4-203ENST00000477703 IDI1Q13907 227 aa26.49■■□□□ 1.83
SMIM4-203ENST00000477703 PIK3C2GO75747 1445 aa26.47■■□□□ 1.83
SMIM4-203ENST00000477703 PER1O15534 1290 aaPredicted RBP26.47■■□□□ 1.83
SMIM4-203ENST00000477703 MRS2Q9HD23 443 aa26.47■■□□□ 1.83
SMIM4-203ENST00000477703 SLC52A1Q9NWF4 448 aa26.47■■□□□ 1.83
SMIM4-203ENST00000477703 ARHGEF40Q8TER5 1519 aa26.47■■□□□ 1.83
SMIM4-203ENST00000477703 SETBP1Q9Y6X0 1596 aa26.45■■□□□ 1.83
SMIM4-203ENST00000477703 C14orf93Q9H972 538 aaKnown RBP26.45■■□□□ 1.82
SMIM4-203ENST00000477703 NEXMIFQ5QGS0 1516 aa26.44■■□□□ 1.82
SMIM4-203ENST00000477703 EIF3AQ14152 1382 aaKnown RBP26.43■■□□□ 1.82
SMIM4-203ENST00000477703 MYO5BQ9ULV0 1848 aa26.43■■□□□ 1.82
SMIM4-203ENST00000477703 FBXO31Q5XUX0 539 aaPredicted RBP26.42■■□□□ 1.82
SMIM4-203ENST00000477703 CLTCQ00610 1675 aaKnown RBP26.41■■□□□ 1.82
SMIM4-203ENST00000477703 CNGB1Q14028 1251 aaPredicted RBP26.41■■□□□ 1.82
SMIM4-203ENST00000477703 TMEM131LA2VDJ0 1609 aa26.4■■□□□ 1.82
SMIM4-203ENST00000477703 KTN1Q86UP2 1357 aaKnown RBP26.4■■□□□ 1.82
SMIM4-203ENST00000477703 ERVK-7P63135 1459 aa26.4■■□□□ 1.82
SMIM4-203ENST00000477703 ADGRB1O14514 1584 aa26.39■■□□□ 1.81
SMIM4-203ENST00000477703 PANK3Q9H999 370 aa26.38■■□□□ 1.81
SMIM4-203ENST00000477703 MYO3AQ8NEV4 1616 aa26.38■■□□□ 1.81
SMIM4-203ENST00000477703 RALBP1Q15311 655 aa26.38■■□□□ 1.81
SMIM4-203ENST00000477703 VGFO15240 615 aaPredicted RBP26.37■■□□□ 1.81
SMIM4-203ENST00000477703 HNRNPUQ00839 825 aaKnown RBP eCLIP26.37■■□□□ 1.81
SMIM4-203ENST00000477703 FAM9BQ8IZU0 186 aa26.36■■□□□ 1.81
SMIM4-203ENST00000477703 ZFYVE9O95405 1425 aa26.36■■□□□ 1.81
SMIM4-203ENST00000477703 CDCA8Q53HL2 280 aa26.35■■□□□ 1.81
SMIM4-203ENST00000477703 NUTM2DQ5VT03 806 aaPredicted RBP26.33■■□□□ 1.81
SMIM4-203ENST00000477703 PARD3Q8TEW0 1356 aa26.33■■□□□ 1.81
SMIM4-203ENST00000477703 MLECQ14165 292 aa26.33■■□□□ 1.8
SMIM4-203ENST00000477703 SLC24A1O60721 1099 aa26.32■■□□□ 1.8
SMIM4-203ENST00000477703 SPATA31D1Q6ZQQ2 1576 aa26.32■■□□□ 1.8
SMIM4-203ENST00000477703 MYBBP1AQ9BQG0 1328 aaKnown RBP26.31■■□□□ 1.8
SMIM4-203ENST00000477703 MYOM1P52179 1685 aa26.31■■□□□ 1.8
SMIM4-203ENST00000477703 TMEM132EQ6IEE7 984 aa26.3■■□□□ 1.8
SMIM4-203ENST00000477703 SBNO2Q9Y2G9 1366 aa26.3■■□□□ 1.8
SMIM4-203ENST00000477703 KDM5AP29375 1690 aaKnown RBP26.29■■□□□ 1.8
SMIM4-203ENST00000477703 BRD4O60885 1362 aaPredicted RBP26.28■■□□□ 1.8
SMIM4-203ENST00000477703 PNISRQ8TF01 805 aaKnown RBP26.28■■□□□ 1.8
SMIM4-203ENST00000477703 TRAK1Q9UPV9 953 aa26.28■■□□□ 1.8
SMIM4-203ENST00000477703 CENPJQ9HC77 1338 aaPredicted RBP26.26■■□□□ 1.79
SMIM4-203ENST00000477703 TMC1Q8TDI8 760 aa26.24■■□□□ 1.79
SMIM4-203ENST00000477703 ZMYM3Q14202 1370 aa26.23■■□□□ 1.79
SMIM4-203ENST00000477703 QRICH2Q9H0J4 1663 aa26.23■■□□□ 1.79
SMIM4-203ENST00000477703 CC2D1BQ5T0F9 858 aaKnown RBP26.22■■□□□ 1.79
SMIM4-203ENST00000477703 ARHGEF28Q8N1W1 1705 aaKnown RBP26.2■■□□□ 1.78
SMIM4-203ENST00000477703 NLRP13Q86W25 1043 aa26.2■■□□□ 1.78
SMIM4-203ENST00000477703 A2ML1A8K2U0 1454 aa26.2■■□□□ 1.78
SMIM4-203ENST00000477703 ASXL1Q8IXJ9 1541 aa26.19■■□□□ 1.78
SMIM4-203ENST00000477703 ZBED9Q6R2W3 1325 aa26.19■■□□□ 1.78
SMIM4-203ENST00000477703 LRPPRCP42704 1394 aaKnown RBP26.18■■□□□ 1.78
SMIM4-203ENST00000477703 AMER1Q5JTC6 1135 aaPredicted RBP26.18■■□□□ 1.78
SMIM4-203ENST00000477703 KNSTRNQ9Y448 316 aa26.17■■□□□ 1.78
SMIM4-203ENST00000477703 STAG3Q9UJ98 1225 aa26.15■■□□□ 1.78
SMIM4-203ENST00000477703 SUPT16HQ9Y5B9 1047 aaKnown RBP26.15■■□□□ 1.78
SMIM4-203ENST00000477703 ESF1Q9H501 851 aaKnown RBP26.15■■□□□ 1.78
SMIM4-203ENST00000477703 NPC1L1Q9UHC9 1359 aa26.12■■□□□ 1.77
SMIM4-203ENST00000477703 ALKQ9UM73 1620 aa26.12■■□□□ 1.77
SMIM4-203ENST00000477703 CARD14Q9BXL6 1004 aa26.1■■□□□ 1.77
SMIM4-203ENST00000477703 RIMS2Q9UQ26 1411 aa26.09■■□□□ 1.77
SMIM4-203ENST00000477703 SENP3Q9H4L4 574 aaPredicted RBP26.09■■□□□ 1.77
SMIM4-203ENST00000477703 PUS7Q96PZ0 661 aaKnown RBP26.07■■□□□ 1.76
SMIM4-203ENST00000477703 TULP4Q9NRJ4 1543 aa26.06■■□□□ 1.76
SMIM4-203ENST00000477703 YTHDC2Q9H6S0 1430 aaKnown RBP26.06■■□□□ 1.76
SMIM4-203ENST00000477703 PTPRMP28827 1452 aa26.06■■□□□ 1.76
SMIM4-203ENST00000477703 TRHP20396 242 aaPredicted RBP26.05■■□□□ 1.76
SMIM4-203ENST00000477703 STK26Q9P289 416 aa26.05■■□□□ 1.76
SMIM4-203ENST00000477703 TNRQ92752 1358 aa26.04■■□□□ 1.76
SMIM4-203ENST00000477703 SETD1AO15047 1707 aaKnown RBP26.04■■□□□ 1.76
SMIM4-203ENST00000477703 PPP2R1AP30153 589 aa26.03■■□□□ 1.76
SMIM4-203ENST00000477703 EVC2Q86UK5 1308 aa26.02■■□□□ 1.76
SMIM4-203ENST00000477703 SLC12A5Q9H2X9 1139 aa26.02■■□□□ 1.76
SMIM4-203ENST00000477703 FKBP8Q14318 412 aa26■■□□□ 1.75
SMIM4-203ENST00000477703 NRXN3Q9Y4C0 1643 aa25.99■■□□□ 1.75
SMIM4-203ENST00000477703 UBR1Q8IWV7 1749 aa25.98■■□□□ 1.75
SMIM4-203ENST00000477703 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.98■■□□□ 1.75
SMIM4-203ENST00000477703 INSRP06213 1382 aa25.98■■□□□ 1.75
SMIM4-203ENST00000477703 SAFB2Q14151 953 aaKnown RBP eCLIP25.97■■□□□ 1.75
SMIM4-203ENST00000477703 PRAM1Q96QH2 718 aa25.97■■□□□ 1.75
SMIM4-203ENST00000477703 CABP2Q9NPB3 220 aa25.95■■□□□ 1.74
SMIM4-203ENST00000477703 DLC1Q96QB1 1528 aa25.94■■□□□ 1.74
SMIM4-203ENST00000477703 CEBPAP49715 358 aaPredicted RBP25.93■■□□□ 1.74
SMIM4-203ENST00000477703 C3P01024 1663 aa25.93■■□□□ 1.74
SMIM4-203ENST00000477703 NSD3Q9BZ95 1437 aa25.93■■□□□ 1.74
SMIM4-203ENST00000477703 SENP3-EIF4A1A0A087X0R7 540 aa25.92■■□□□ 1.74
SMIM4-203ENST00000477703 SMG6Q86US8 1419 aaKnown RBP25.92■■□□□ 1.74
SMIM4-203ENST00000477703 TMEM2Q9UHN6 1383 aa25.92■■□□□ 1.74
SMIM4-203ENST00000477703 NEFLP07196 543 aa25.92■■□□□ 1.74
SMIM4-203ENST00000477703 POGKQ9P215 609 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms