RNA–Protein interactions for RNA: ENST00000477607.6

P4HB-211, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 1 (best)

Gene P4HB, Length 1,110 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-211ENST00000477607 LOC105371045A0A1W2PR82 267 aa24.19■■□□□ 1.46
P4HB-211ENST00000477607 ANKRD30AQ9BXX3 1397 aa24.17■■□□□ 1.46
P4HB-211ENST00000477607 MSH6P52701 1360 aa24.16■■□□□ 1.46
P4HB-211ENST00000477607 COL16A1Q07092 1604 aaPredicted RBP24.15■■□□□ 1.46
P4HB-211ENST00000477607 CHIC2Q9UKJ5 165 aa24.15■■□□□ 1.46
P4HB-211ENST00000477607 ZFYVE9O95405 1425 aa24.12■■□□□ 1.45
P4HB-211ENST00000477607 TMEM131LA2VDJ0 1609 aa24.12■■□□□ 1.45
P4HB-211ENST00000477607 ADGRL2O95490 1459 aa24.11■■□□□ 1.45
P4HB-211ENST00000477607 RPRD2Q5VT52 1461 aaKnown RBP24.11■■□□□ 1.45
P4HB-211ENST00000477607 BCANQ96GW7 911 aa24.1■■□□□ 1.45
P4HB-211ENST00000477607 JCADQ9P266 1359 aa24.09■■□□□ 1.45
P4HB-211ENST00000477607 PLEKHG1Q9ULL1 1385 aa24.08■■□□□ 1.45
P4HB-211ENST00000477607 SLC52A1Q9NWF4 448 aa24.08■■□□□ 1.45
P4HB-211ENST00000477607 APLP2Q06481 763 aa24.06■■□□□ 1.44
P4HB-211ENST00000477607 SLAIN2Q9P270 581 aa24.06■■□□□ 1.44
P4HB-211ENST00000477607 RIMS2Q9UQ26 1411 aa24.06■■□□□ 1.44
P4HB-211ENST00000477607 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.06■■□□□ 1.44
P4HB-211ENST00000477607 LRP6O75581 1613 aa24.05■■□□□ 1.44
P4HB-211ENST00000477607 SHPRHQ149N8 1683 aa24.05■■□□□ 1.44
P4HB-211ENST00000477607 UNC13BO14795 1591 aa24.03■■□□□ 1.44
P4HB-211ENST00000477607 E9PCH4 1651 aa24.03■■□□□ 1.44
P4HB-211ENST00000477607 PPP1R15AO75807 674 aaPredicted RBP24.02■■□□□ 1.44
P4HB-211ENST00000477607 DIP2AQ14689 1571 aa24.02■■□□□ 1.44
P4HB-211ENST00000477607 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
P4HB-211ENST00000477607 ANKRD50Q9ULJ7 1429 aa24.01■■□□□ 1.43
P4HB-211ENST00000477607 NCOA3Q9Y6Q9 1424 aa23.97■■□□□ 1.43
P4HB-211ENST00000477607 ADAMTS13Q76LX8 1427 aa23.96■■□□□ 1.43
P4HB-211ENST00000477607 C14orf37Q86TY3 774 aa23.95■■□□□ 1.42
P4HB-211ENST00000477607 SPATA31A6Q5VVP1 1343 aa23.94■■□□□ 1.42
P4HB-211ENST00000477607 IQGAP3Q86VI3 1631 aa23.93■■□□□ 1.42
P4HB-211ENST00000477607 HDGFP51858 240 aaKnown RBP23.93■■□□□ 1.42
P4HB-211ENST00000477607 TBX22Q9Y458 520 aa23.93■■□□□ 1.42
P4HB-211ENST00000477607 TRPM2O94759 1503 aa23.93■■□□□ 1.42
P4HB-211ENST00000477607 FAM50AQ14320 339 aaKnown RBP23.92■■□□□ 1.42
P4HB-211ENST00000477607 MEX3CQ5U5Q3 659 aaKnown RBP23.92■■□□□ 1.42
P4HB-211ENST00000477607 CHGAP10645 457 aaKnown RBP23.91■■□□□ 1.42
P4HB-211ENST00000477607 NUTM2DQ5VT03 806 aaPredicted RBP23.9■■□□□ 1.42
P4HB-211ENST00000477607 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.89■■□□□ 1.41
P4HB-211ENST00000477607 XRN1Q8IZH2 1706 aaKnown RBP23.89■■□□□ 1.41
P4HB-211ENST00000477607 PIK3R4Q99570 1358 aa23.89■■□□□ 1.41
P4HB-211ENST00000477607 ZNF772Q68DY9 489 aaPredicted RBP23.88■■□□□ 1.41
P4HB-211ENST00000477607 CADPS2Q86UW7 1296 aa23.88■■□□□ 1.41
P4HB-211ENST00000477607 TRIM52Q96A61 297 aa23.88■■□□□ 1.41
P4HB-211ENST00000477607 NHSL1Q5SYE7 1610 aa23.88■■□□□ 1.41
P4HB-211ENST00000477607 NRXN3Q9Y4C0 1643 aa23.88■■□□□ 1.41
P4HB-211ENST00000477607 ATF3P18847 181 aa23.87■■□□□ 1.41
P4HB-211ENST00000477607 C19orf44Q9H6X5 657 aa23.86■■□□□ 1.41
P4HB-211ENST00000477607 PTPRUQ92729 1446 aa23.85■■□□□ 1.41
P4HB-211ENST00000477607 UPF1Q92900 1129 aaKnown RBP eCLIP23.85■■□□□ 1.41
P4HB-211ENST00000477607 ASXL1Q8IXJ9 1541 aa23.84■■□□□ 1.41
P4HB-211ENST00000477607 SPHKAPQ2M3C7 1700 aa23.83■■□□□ 1.41
P4HB-211ENST00000477607 DCCP43146 1447 aa23.82■■□□□ 1.4
P4HB-211ENST00000477607 BRINP3Q76B58 766 aa23.81■■□□□ 1.4
P4HB-211ENST00000477607 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
P4HB-211ENST00000477607 CDK12Q9NYV4 1490 aaPredicted RBP23.8■■□□□ 1.4
P4HB-211ENST00000477607 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
P4HB-211ENST00000477607 AMOTL2Q9Y2J4 779 aa23.79■■□□□ 1.4
P4HB-211ENST00000477607 NUTM2BA6NNL0 878 aaPredicted RBP23.78■■□□□ 1.4
P4HB-211ENST00000477607 NUTM2EB1AL46 878 aaPredicted RBP23.78■■□□□ 1.4
P4HB-211ENST00000477607 NUTM2AQ8IVF1 878 aaPredicted RBP23.78■■□□□ 1.4
P4HB-211ENST00000477607 MST1RQ04912 1400 aa23.77■■□□□ 1.4
P4HB-211ENST00000477607 RXRBP28702 533 aa23.76■■□□□ 1.39
P4HB-211ENST00000477607 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
P4HB-211ENST00000477607 ROCK1Q13464 1354 aa23.75■■□□□ 1.39
P4HB-211ENST00000477607 AFF2P51816 1311 aa23.74■■□□□ 1.39
P4HB-211ENST00000477607 NUP155O75694 1391 aa23.72■■□□□ 1.39
P4HB-211ENST00000477607 RGS12O14924 1447 aa23.7■■□□□ 1.38
P4HB-211ENST00000477607 ADGRL3Q9HAR2 1447 aa23.69■■□□□ 1.38
P4HB-211ENST00000477607 METP08581 1390 aa23.67■■□□□ 1.38
P4HB-211ENST00000477607 CLTCL1P53675 1640 aa23.67■■□□□ 1.38
P4HB-211ENST00000477607 KIF1BO60333 1816 aa23.67■■□□□ 1.38
P4HB-211ENST00000477607 NEXMIFQ5QGS0 1516 aa23.67■■□□□ 1.38
P4HB-211ENST00000477607 PNPLA6Q8IY17 1366 aa23.66■■□□□ 1.38
P4HB-211ENST00000477607 LAMC1P11047 1609 aa23.66■■□□□ 1.38
P4HB-211ENST00000477607 C8orf37Q96NL8 207 aa23.65■■□□□ 1.38
P4HB-211ENST00000477607 DDX17Q92841 729 aaKnown RBP23.64■■□□□ 1.37
P4HB-211ENST00000477607 LRRC59Q96AG4 307 aaKnown RBP23.64■■□□□ 1.37
P4HB-211ENST00000477607 ZNF326Q5BKZ1 582 aaKnown RBP23.62■■□□□ 1.37
P4HB-211ENST00000477607 ITGAEP38570 1179 aa23.59■■□□□ 1.37
P4HB-211ENST00000477607 RBM6P78332 1123 aaKnown RBP23.59■■□□□ 1.37
P4HB-211ENST00000477607 C1orf167Q5SNV9 1468 aa23.58■■□□□ 1.37
P4HB-211ENST00000477607 QTRT2Q9H974 415 aaKnown RBP23.58■■□□□ 1.37
P4HB-211ENST00000477607 MARF1Q9Y4F3 1742 aaKnown RBP23.54■■□□□ 1.36
P4HB-211ENST00000477607 PTCH1Q13635 1447 aa23.54■■□□□ 1.36
P4HB-211ENST00000477607 ADAMTS2O95450 1211 aa23.54■■□□□ 1.36
P4HB-211ENST00000477607 COL22A1Q8NFW1 1626 aaPredicted RBP23.54■■□□□ 1.36
P4HB-211ENST00000477607 NGLY1Q96IV0 654 aa23.52■■□□□ 1.36
P4HB-211ENST00000477607 PPLO60437 1756 aa23.5■■□□□ 1.35
P4HB-211ENST00000477607 ATAD2Q6PL18 1390 aa23.5■■□□□ 1.35
P4HB-211ENST00000477607 ROBO2Q9HCK4 1378 aa23.49■■□□□ 1.35
P4HB-211ENST00000477607 SOS2Q07890 1332 aaPredicted RBP23.48■■□□□ 1.35
P4HB-211ENST00000477607 PRAG1Q86YV5 1406 aa23.46■■□□□ 1.35
P4HB-211ENST00000477607 ORAI2Q96SN7 254 aa23.46■■□□□ 1.35
P4HB-211ENST00000477607 USP21Q9UK80 565 aa23.46■■□□□ 1.35
P4HB-211ENST00000477607 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
P4HB-211ENST00000477607 ATRNO75882 1429 aa23.43■■□□□ 1.34
P4HB-211ENST00000477607 TRPC5Q9UL62 973 aaPredicted RBP23.43■■□□□ 1.34
P4HB-211ENST00000477607 MYOM2P54296 1465 aa23.42■■□□□ 1.34
P4HB-211ENST00000477607 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.4■■□□□ 1.34
P4HB-211ENST00000477607 HFM1A2PYH4 1435 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms