RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 ONECUT3O60422 494 aaPredicted RBP9.55□□□□□ -0.88
VPS45-207ENST00000477558 PACS2Q86VP3 889 aa9.55□□□□□ -0.88
VPS45-207ENST00000477558 TATDN2Q93075 761 aa9.55□□□□□ -0.88
VPS45-207ENST00000477558 LAMC3Q9Y6N6 1575 aa9.55□□□□□ -0.88
VPS45-207ENST00000477558 NLRP7Q8WX94 980 aa9.54□□□□□ -0.88
VPS45-207ENST00000477558 EYA1Q99502 592 aa9.54□□□□□ -0.88
VPS45-207ENST00000477558 PNMA3Q9UL41 463 aa9.54□□□□□ -0.88
VPS45-207ENST00000477558 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
VPS45-207ENST00000477558 PXYLP1Q8TE99 480 aa9.53□□□□□ -0.88
VPS45-207ENST00000477558 OATP04181 439 aa9.52□□□□□ -0.89
VPS45-207ENST00000477558 RABGEF1Q9UJ41 708 aa9.52□□□□□ -0.89
VPS45-207ENST00000477558 PDE4DQ08499 809 aa9.51□□□□□ -0.89
VPS45-207ENST00000477558 SEPT9Q9UHD8 586 aaPredicted RBP9.51□□□□□ -0.89
VPS45-207ENST00000477558 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
VPS45-207ENST00000477558 BHMG1C9JSJ3 638 aaPredicted RBP9.5□□□□□ -0.89
VPS45-207ENST00000477558 BRPF1P55201 1214 aaPredicted RBP9.5□□□□□ -0.89
VPS45-207ENST00000477558 RBM46Q8TBY0 533 aaKnown RBP9.5□□□□□ -0.89
VPS45-207ENST00000477558 NESP48681 1621 aa9.5□□□□□ -0.89
VPS45-207ENST00000477558 REPIN1Q9BWE0 567 aaKnown RBP9.48□□□□□ -0.89
VPS45-207ENST00000477558 GPBP1L1Q9HC44 474 aaPredicted RBP9.48□□□□□ -0.89
VPS45-207ENST00000477558 RCCD1A6NED2 376 aa9.48□□□□□ -0.89
VPS45-207ENST00000477558 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
VPS45-207ENST00000477558 AMHR2Q16671 573 aa9.48□□□□□ -0.89
VPS45-207ENST00000477558 CFTRP13569 1480 aa9.47□□□□□ -0.89
VPS45-207ENST00000477558 PRDM2Q13029 1718 aa9.47□□□□□ -0.89
VPS45-207ENST00000477558 CADPSQ9ULU8 1353 aa9.47□□□□□ -0.89
VPS45-207ENST00000477558 PTPN5P54829 565 aa9.47□□□□□ -0.89
VPS45-207ENST00000477558 MDM2Q00987 491 aaPredicted RBP9.47□□□□□ -0.89
VPS45-207ENST00000477558 CCDC88BA6NC98 1476 aa9.46□□□□□ -0.9
VPS45-207ENST00000477558 PARP9Q8IXQ6 854 aa9.45□□□□□ -0.9
VPS45-207ENST00000477558 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
VPS45-207ENST00000477558 KIF21AQ7Z4S6 1674 aa9.44□□□□□ -0.9
VPS45-207ENST00000477558 TTLL12Q14166 644 aaPredicted RBP9.44□□□□□ -0.9
VPS45-207ENST00000477558 IFFO2Q5TF58 517 aa9.44□□□□□ -0.9
VPS45-207ENST00000477558 TMUB1Q9BVT8 246 aa9.44□□□□□ -0.9
VPS45-207ENST00000477558 THOC2Q8NI27 1593 aaKnown RBP9.44□□□□□ -0.9
VPS45-207ENST00000477558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.43□□□□□ -0.9
VPS45-207ENST00000477558 RGS20O76081 388 aa9.43□□□□□ -0.9
VPS45-207ENST00000477558 DNAJB2P25686 324 aa9.43□□□□□ -0.9
VPS45-207ENST00000477558 MRPL50Q8N5N7 158 aaKnown RBP9.43□□□□□ -0.9
VPS45-207ENST00000477558 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
VPS45-207ENST00000477558 KDM4CQ9H3R0 1056 aa9.42□□□□□ -0.9
VPS45-207ENST00000477558 CLCN1P35523 988 aa9.41□□□□□ -0.9
VPS45-207ENST00000477558 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
VPS45-207ENST00000477558 THSD4Q6ZMP0 1018 aa9.41□□□□□ -0.9
VPS45-207ENST00000477558 TMEM134Q9H6X4 195 aa9.41□□□□□ -0.9
VPS45-207ENST00000477558 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
VPS45-207ENST00000477558 PDS5BQ9NTI5 1447 aa9.41□□□□□ -0.9
VPS45-207ENST00000477558 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
VPS45-207ENST00000477558 LAPTM4BQ86VI4 370 aa9.4□□□□□ -0.9
VPS45-207ENST00000477558 ZFRQ96KR1 1074 aaKnown RBP9.4□□□□□ -0.9
VPS45-207ENST00000477558 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
VPS45-207ENST00000477558 DAXXQ9UER7 740 aaPredicted RBP9.39□□□□□ -0.91
VPS45-207ENST00000477558 ERCC6Q03468 1493 aa9.39□□□□□ -0.91
VPS45-207ENST00000477558 MS4A1P11836 297 aa9.39□□□□□ -0.91
VPS45-207ENST00000477558 SAMD7Q7Z3H4 446 aa9.39□□□□□ -0.91
VPS45-207ENST00000477558 WNT2BQ93097 391 aa9.39□□□□□ -0.91
VPS45-207ENST00000477558 SSTR3P32745 418 aaPredicted RBP9.38□□□□□ -0.91
VPS45-207ENST00000477558 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
VPS45-207ENST00000477558 CUX2O14529 1486 aa9.37□□□□□ -0.91
VPS45-207ENST00000477558 FANCD2Q9BXW9 1451 aa9.37□□□□□ -0.91
VPS45-207ENST00000477558 WDR62O43379 1518 aa9.37□□□□□ -0.91
VPS45-207ENST00000477558 A0A0G2JS52 829 aa9.36□□□□□ -0.91
VPS45-207ENST00000477558 FAM117AQ9C073 453 aa9.36□□□□□ -0.91
VPS45-207ENST00000477558 CEP164Q9UPV0 1460 aa9.35□□□□□ -0.91
VPS45-207ENST00000477558 DDX11L8A8MPP1 907 aa9.35□□□□□ -0.91
VPS45-207ENST00000477558 HDGFP51858 240 aaKnown RBP9.35□□□□□ -0.91
VPS45-207ENST00000477558 IL27Q8NEV9 243 aa9.35□□□□□ -0.91
VPS45-207ENST00000477558 MRC2Q9UBG0 1479 aa9.34□□□□□ -0.91
VPS45-207ENST00000477558 SLC10A3P09131 477 aa9.32□□□□□ -0.92
VPS45-207ENST00000477558 ANKK1Q8NFD2 765 aa9.32□□□□□ -0.92
VPS45-207ENST00000477558 IRX2Q9BZI1 471 aaPredicted RBP9.32□□□□□ -0.92
VPS45-207ENST00000477558 BCAMP50895 628 aa9.31□□□□□ -0.92
VPS45-207ENST00000477558 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.31□□□□□ -0.92
VPS45-207ENST00000477558 PLEKHG3A1L390 1219 aa9.31□□□□□ -0.92
VPS45-207ENST00000477558 RNF40O75150 1001 aa9.31□□□□□ -0.92
VPS45-207ENST00000477558 CD46P15529 392 aa9.31□□□□□ -0.92
VPS45-207ENST00000477558 RDH13Q8NBN7 331 aa9.31□□□□□ -0.92
VPS45-207ENST00000477558 LRCH3Q96II8 777 aa9.31□□□□□ -0.92
VPS45-207ENST00000477558 BEGAINQ9BUH8 593 aa9.31□□□□□ -0.92
VPS45-207ENST00000477558 URB2Q14146 1524 aaKnown RBP9.3□□□□□ -0.92
VPS45-207ENST00000477558 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
VPS45-207ENST00000477558 SULF1Q8IWU6 871 aa9.3□□□□□ -0.92
VPS45-207ENST00000477558 SLF2Q8IX21 1173 aa9.3□□□□□ -0.92
VPS45-207ENST00000477558 SUPT5HO00267 1087 aaKnown RBP9.29□□□□□ -0.92
VPS45-207ENST00000477558 DDRGK1Q96HY6 314 aa9.27□□□□□ -0.93
VPS45-207ENST00000477558 HPS5Q9UPZ3 1129 aa9.27□□□□□ -0.93
VPS45-207ENST00000477558 DNMBPQ6XZF7 1577 aa9.26□□□□□ -0.93
VPS45-207ENST00000477558 GCGRP47871 477 aa9.25□□□□□ -0.93
VPS45-207ENST00000477558 SLC4A3P48751 1232 aa9.25□□□□□ -0.93
VPS45-207ENST00000477558 PPP4CP60510 307 aa9.25□□□□□ -0.93
VPS45-207ENST00000477558 RSPH4AQ5TD94 716 aa9.25□□□□□ -0.93
VPS45-207ENST00000477558 TOPBP1Q92547 1522 aa9.25□□□□□ -0.93
VPS45-207ENST00000477558 ITGBL1O95965 494 aaPredicted RBP9.24□□□□□ -0.93
VPS45-207ENST00000477558 WBP1LQ9NX94 342 aa9.24□□□□□ -0.93
VPS45-207ENST00000477558 TSR3Q9UJK0 312 aaKnown RBP9.24□□□□□ -0.93
VPS45-207ENST00000477558 ABCC8Q09428 1581 aa9.24□□□□□ -0.93
VPS45-207ENST00000477558 CFHP08603 1231 aa9.23□□□□□ -0.93
VPS45-207ENST00000477558 TMEM132AQ24JP5 1023 aa9.23□□□□□ -0.93
VPS45-207ENST00000477558 SPIRE2Q8WWL2 714 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms