RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 KCNA6P17658 529 aa23.74■■□□□ 1.39
CLDN11-204ENST00000477531 RIMS2Q9UQ26 1411 aa23.74■■□□□ 1.39
CLDN11-204ENST00000477531 HSPA1LP34931 641 aa23.72■■□□□ 1.39
CLDN11-204ENST00000477531 TMEM131LA2VDJ0 1609 aa23.71■■□□□ 1.39
CLDN11-204ENST00000477531 ZFYVE9O95405 1425 aa23.7■■□□□ 1.38
CLDN11-204ENST00000477531 PLEKHG1Q9ULL1 1385 aa23.7■■□□□ 1.38
CLDN11-204ENST00000477531 PROSER2Q86WR7 435 aaPredicted RBP23.7■■□□□ 1.38
CLDN11-204ENST00000477531 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
CLDN11-204ENST00000477531 NAIPQ13075 1403 aa23.68■■□□□ 1.38
CLDN11-204ENST00000477531 MYO5BQ9ULV0 1848 aa23.68■■□□□ 1.38
CLDN11-204ENST00000477531 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
CLDN11-204ENST00000477531 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
CLDN11-204ENST00000477531 NUTM2DQ5VT03 806 aaPredicted RBP23.65■■□□□ 1.38
CLDN11-204ENST00000477531 TBX22Q9Y458 520 aa23.64■■□□□ 1.37
CLDN11-204ENST00000477531 ZNF326Q5BKZ1 582 aaKnown RBP23.62■■□□□ 1.37
CLDN11-204ENST00000477531 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
CLDN11-204ENST00000477531 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
CLDN11-204ENST00000477531 HFM1A2PYH4 1435 aa23.61■■□□□ 1.37
CLDN11-204ENST00000477531 SPHKAPQ2M3C7 1700 aa23.59■■□□□ 1.37
CLDN11-204ENST00000477531 RBM33Q96EV2 1170 aaKnown RBP23.58■■□□□ 1.37
CLDN11-204ENST00000477531 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
CLDN11-204ENST00000477531 SLC4A1APQ9BWU0 796 aaKnown RBP23.57■■□□□ 1.36
CLDN11-204ENST00000477531 XIRP1Q702N8 1843 aaKnown RBP23.56■■□□□ 1.36
CLDN11-204ENST00000477531 MSH6P52701 1360 aa23.56■■□□□ 1.36
CLDN11-204ENST00000477531 PIK3R4Q99570 1358 aa23.54■■□□□ 1.36
CLDN11-204ENST00000477531 DIP2AQ14689 1571 aa23.54■■□□□ 1.36
CLDN11-204ENST00000477531 ILDR2Q71H61 639 aa23.54■■□□□ 1.36
CLDN11-204ENST00000477531 ADAMTS13Q76LX8 1427 aa23.53■■□□□ 1.36
CLDN11-204ENST00000477531 C14orf37Q86TY3 774 aa23.53■■□□□ 1.36
CLDN11-204ENST00000477531 CHD2O14647 1828 aaKnown RBP23.53■■□□□ 1.36
CLDN11-204ENST00000477531 FAM135BQ49AJ0 1406 aa23.52■■□□□ 1.36
CLDN11-204ENST00000477531 TRPM2O94759 1503 aa23.52■■□□□ 1.36
CLDN11-204ENST00000477531 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
CLDN11-204ENST00000477531 AMOTL2Q9Y2J4 779 aa23.48■■□□□ 1.35
CLDN11-204ENST00000477531 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
CLDN11-204ENST00000477531 MED1Q15648 1581 aaPredicted RBP23.46■■□□□ 1.35
CLDN11-204ENST00000477531 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
CLDN11-204ENST00000477531 SLAIN2Q9P270 581 aa23.46■■□□□ 1.35
CLDN11-204ENST00000477531 KIF1BO60333 1816 aa23.45■■□□□ 1.34
CLDN11-204ENST00000477531 ACIN1Q9UKV3 1341 aaKnown RBP23.44■■□□□ 1.34
CLDN11-204ENST00000477531 VGFO15240 615 aaPredicted RBP23.43■■□□□ 1.34
CLDN11-204ENST00000477531 ATF3P18847 181 aa23.43■■□□□ 1.34
CLDN11-204ENST00000477531 CADPS2Q86UW7 1296 aa23.43■■□□□ 1.34
CLDN11-204ENST00000477531 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
CLDN11-204ENST00000477531 SETBP1Q9Y6X0 1596 aa23.43■■□□□ 1.34
CLDN11-204ENST00000477531 SOCS7O14512 581 aa23.42■■□□□ 1.34
CLDN11-204ENST00000477531 RPGRIP1LQ68CZ1 1315 aa23.41■■□□□ 1.34
CLDN11-204ENST00000477531 ROBO1Q9Y6N7 1651 aa23.4■■□□□ 1.34
CLDN11-204ENST00000477531 PTPRUQ92729 1446 aa23.4■■□□□ 1.34
CLDN11-204ENST00000477531 NEXMIFQ5QGS0 1516 aa23.39■■□□□ 1.34
CLDN11-204ENST00000477531 MPHOSPH9Q99550 1183 aa23.39■■□□□ 1.33
CLDN11-204ENST00000477531 FOXD1Q16676 465 aa23.38■■□□□ 1.33
CLDN11-204ENST00000477531 NRXN3Q9Y4C0 1643 aa23.37■■□□□ 1.33
CLDN11-204ENST00000477531 METP08581 1390 aa23.36■■□□□ 1.33
CLDN11-204ENST00000477531 CCDC144AA2RUR9 1427 aa23.34■■□□□ 1.33
CLDN11-204ENST00000477531 SETD5Q9C0A6 1442 aa23.33■■□□□ 1.33
CLDN11-204ENST00000477531 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.31■■□□□ 1.32
CLDN11-204ENST00000477531 RGL3Q3MIN7 710 aa23.3■■□□□ 1.32
CLDN11-204ENST00000477531 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
CLDN11-204ENST00000477531 DCCP43146 1447 aa23.29■■□□□ 1.32
CLDN11-204ENST00000477531 PHLPP1O60346 1717 aa23.27■■□□□ 1.32
CLDN11-204ENST00000477531 JCADQ9P266 1359 aa23.27■■□□□ 1.31
CLDN11-204ENST00000477531 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
CLDN11-204ENST00000477531 ANKRD30BQ9BXX2 1392 aa23.23■■□□□ 1.31
CLDN11-204ENST00000477531 RAB3GAP2Q9H2M9 1393 aa23.23■■□□□ 1.31
CLDN11-204ENST00000477531 ADGRL3Q9HAR2 1447 aa23.23■■□□□ 1.31
CLDN11-204ENST00000477531 PPLO60437 1756 aa23.22■■□□□ 1.31
CLDN11-204ENST00000477531 PTCH1Q13635 1447 aa23.21■■□□□ 1.31
CLDN11-204ENST00000477531 SPATA31E1Q6ZUB1 1445 aa23.2■■□□□ 1.3
CLDN11-204ENST00000477531 ADGRF5Q8IZF2 1346 aa23.2■■□□□ 1.3
CLDN11-204ENST00000477531 MST1RQ04912 1400 aa23.18■■□□□ 1.3
CLDN11-204ENST00000477531 AHDC1Q5TGY3 1603 aaPredicted RBP23.18■■□□□ 1.3
CLDN11-204ENST00000477531 ROBO2Q9HCK4 1378 aa23.17■■□□□ 1.3
CLDN11-204ENST00000477531 COL16A1Q07092 1604 aaPredicted RBP23.17■■□□□ 1.3
CLDN11-204ENST00000477531 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
CLDN11-204ENST00000477531 RGS17Q9UGC6 210 aaPredicted RBP23.16■■□□□ 1.3
CLDN11-204ENST00000477531 SETD1AO15047 1707 aaKnown RBP23.16■■□□□ 1.3
CLDN11-204ENST00000477531 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
CLDN11-204ENST00000477531 STK26Q9P289 416 aa23.14■■□□□ 1.29
CLDN11-204ENST00000477531 PRAG1Q86YV5 1406 aa23.14■■□□□ 1.29
CLDN11-204ENST00000477531 ASXL1Q8IXJ9 1541 aa23.13■■□□□ 1.29
CLDN11-204ENST00000477531 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
CLDN11-204ENST00000477531 HRCP23327 699 aa23.11■■□□□ 1.29
CLDN11-204ENST00000477531 LRRC59Q96AG4 307 aaKnown RBP23.11■■□□□ 1.29
CLDN11-204ENST00000477531 TMEM132EQ6IEE7 984 aa23.09■■□□□ 1.29
CLDN11-204ENST00000477531 C1orf167Q5SNV9 1468 aa23.09■■□□□ 1.29
CLDN11-204ENST00000477531 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
CLDN11-204ENST00000477531 IFT172Q9UG01 1749 aa23.08■■□□□ 1.29
CLDN11-204ENST00000477531 LRPPRCP42704 1394 aaKnown RBP23.08■■□□□ 1.29
CLDN11-204ENST00000477531 POTEAQ6S8J7 498 aa23.07■■□□□ 1.28
CLDN11-204ENST00000477531 ABCC11Q96J66 1382 aa23.06■■□□□ 1.28
CLDN11-204ENST00000477531 NUTM2BA6NNL0 878 aaPredicted RBP23.06■■□□□ 1.28
CLDN11-204ENST00000477531 NUTM2EB1AL46 878 aaPredicted RBP23.06■■□□□ 1.28
CLDN11-204ENST00000477531 NUTM2AQ8IVF1 878 aaPredicted RBP23.06■■□□□ 1.28
CLDN11-204ENST00000477531 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
CLDN11-204ENST00000477531 SHPRHQ149N8 1683 aa23.06■■□□□ 1.28
CLDN11-204ENST00000477531 WAPLQ7Z5K2 1190 aa23.05■■□□□ 1.28
CLDN11-204ENST00000477531 DDX17Q92841 729 aaKnown RBP23.05■■□□□ 1.28
CLDN11-204ENST00000477531 ORAI2Q96SN7 254 aa23.04■■□□□ 1.28
CLDN11-204ENST00000477531 TECPR2O15040 1411 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms