RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 NEXMIFQ5QGS0 1516 aa24.37■■□□□ 1.49
EPHB4-204ENST00000477446 LTKP29376 864 aa24.36■■□□□ 1.49
EPHB4-204ENST00000477446 TXNDC2Q86VQ3 553 aa24.36■■□□□ 1.49
EPHB4-204ENST00000477446 ANKLE2Q86XL3 938 aa24.36■■□□□ 1.49
EPHB4-204ENST00000477446 STRCQ7RTU9 1775 aa24.35■■□□□ 1.49
EPHB4-204ENST00000477446 RPGRIP1LQ68CZ1 1315 aa24.35■■□□□ 1.49
EPHB4-204ENST00000477446 NUTM2DQ5VT03 806 aaPredicted RBP24.35■■□□□ 1.49
EPHB4-204ENST00000477446 PPLO60437 1756 aa24.35■■□□□ 1.49
EPHB4-204ENST00000477446 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
EPHB4-204ENST00000477446 EID1Q9Y6B2 187 aa24.34■■□□□ 1.49
EPHB4-204ENST00000477446 NCKAP5LQ9HCH0 1330 aa24.34■■□□□ 1.49
EPHB4-204ENST00000477446 IFT172Q9UG01 1749 aa24.33■■□□□ 1.49
EPHB4-204ENST00000477446 SCAF11Q99590 1463 aaKnown RBP24.33■■□□□ 1.49
EPHB4-204ENST00000477446 HDGFP51858 240 aaKnown RBP24.33■■□□□ 1.48
EPHB4-204ENST00000477446 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.33■■□□□ 1.48
EPHB4-204ENST00000477446 PPP1R15AO75807 674 aaPredicted RBP24.29■■□□□ 1.48
EPHB4-204ENST00000477446 VGFO15240 615 aaPredicted RBP24.28■■□□□ 1.48
EPHB4-204ENST00000477446 DCAF11Q8TEB1 546 aa24.28■■□□□ 1.48
EPHB4-204ENST00000477446 L3MBTL2Q969R5 705 aa24.27■■□□□ 1.48
EPHB4-204ENST00000477446 MED14O60244 1454 aa24.27■■□□□ 1.48
EPHB4-204ENST00000477446 TONSLQ96HA7 1378 aa24.25■■□□□ 1.47
EPHB4-204ENST00000477446 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
EPHB4-204ENST00000477446 KDM2AQ9Y2K7 1162 aa24.25■■□□□ 1.47
EPHB4-204ENST00000477446 PLEKHG1Q9ULL1 1385 aa24.25■■□□□ 1.47
EPHB4-204ENST00000477446 NPHP4O75161 1426 aaPredicted RBP24.24■■□□□ 1.47
EPHB4-204ENST00000477446 ADGRF5Q8IZF2 1346 aa24.24■■□□□ 1.47
EPHB4-204ENST00000477446 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
EPHB4-204ENST00000477446 MYOM2P54296 1465 aa24.23■■□□□ 1.47
EPHB4-204ENST00000477446 STAC3Q96MF2 364 aa24.21■■□□□ 1.47
EPHB4-204ENST00000477446 BCANQ96GW7 911 aa24.2■■□□□ 1.47
EPHB4-204ENST00000477446 NRXN1Q9ULB1 1477 aa24.19■■□□□ 1.46
EPHB4-204ENST00000477446 NRXN3Q9Y4C0 1643 aa24.19■■□□□ 1.46
EPHB4-204ENST00000477446 SETBP1Q9Y6X0 1596 aa24.18■■□□□ 1.46
EPHB4-204ENST00000477446 DMRT2Q9Y5R5 561 aa24.18■■□□□ 1.46
EPHB4-204ENST00000477446 PIK3C2GO75747 1445 aa24.17■■□□□ 1.46
EPHB4-204ENST00000477446 SLC26A8Q96RN1 970 aa24.16■■□□□ 1.46
EPHB4-204ENST00000477446 TIMELESSQ9UNS1 1208 aa24.16■■□□□ 1.46
EPHB4-204ENST00000477446 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
EPHB4-204ENST00000477446 PRAG1Q86YV5 1406 aa24.13■■□□□ 1.45
EPHB4-204ENST00000477446 ALKQ9UM73 1620 aa24.12■■□□□ 1.45
EPHB4-204ENST00000477446 DIP2AQ14689 1571 aa24.12■■□□□ 1.45
EPHB4-204ENST00000477446 TBX22Q9Y458 520 aa24.12■■□□□ 1.45
EPHB4-204ENST00000477446 SETD1AO15047 1707 aaKnown RBP24.11■■□□□ 1.45
EPHB4-204ENST00000477446 CFAP70Q5T0N1 1121 aa24.09■■□□□ 1.45
EPHB4-204ENST00000477446 C14orf93Q9H972 538 aaKnown RBP24.09■■□□□ 1.45
EPHB4-204ENST00000477446 NBPF8Q3BBV2 869 aa24.08■■□□□ 1.44
EPHB4-204ENST00000477446 LAMC1P11047 1609 aa24.07■■□□□ 1.44
EPHB4-204ENST00000477446 METP08581 1390 aa24.07■■□□□ 1.44
EPHB4-204ENST00000477446 KIAA1210Q9ULL0 1709 aa24.05■■□□□ 1.44
EPHB4-204ENST00000477446 TRPM1Q7Z4N2 1603 aa24.03■■□□□ 1.44
EPHB4-204ENST00000477446 CHD2O14647 1828 aaKnown RBP24.02■■□□□ 1.44
EPHB4-204ENST00000477446 ASXL1Q8IXJ9 1541 aa24.02■■□□□ 1.44
EPHB4-204ENST00000477446 ZNF316A6NFI3 1004 aaPredicted RBP24.02■■□□□ 1.44
EPHB4-204ENST00000477446 TMEM132EQ6IEE7 984 aa24.02■■□□□ 1.44
EPHB4-204ENST00000477446 PIK3R4Q99570 1358 aa24.01■■□□□ 1.43
EPHB4-204ENST00000477446 ZNF335Q9H4Z2 1342 aaPredicted RBP24.01■■□□□ 1.43
EPHB4-204ENST00000477446 PTPRUQ92729 1446 aa24■■□□□ 1.43
EPHB4-204ENST00000477446 STRCP1A6NGW2 1772 aa24■■□□□ 1.43
EPHB4-204ENST00000477446 NBPF1Q3BBV0 1214 aa23.99■■□□□ 1.43
EPHB4-204ENST00000477446 ADGRB1O14514 1584 aa23.99■■□□□ 1.43
EPHB4-204ENST00000477446 KCNA6P17658 529 aa23.98■■□□□ 1.43
EPHB4-204ENST00000477446 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
EPHB4-204ENST00000477446 NWD1Q149M9 1564 aa23.97■■□□□ 1.43
EPHB4-204ENST00000477446 XRN1Q8IZH2 1706 aaKnown RBP23.95■■□□□ 1.42
EPHB4-204ENST00000477446 RALGAPBQ86X10 1494 aa23.95■■□□□ 1.42
EPHB4-204ENST00000477446 YTHDC2Q9H6S0 1430 aaKnown RBP23.95■■□□□ 1.42
EPHB4-204ENST00000477446 ROCK2O75116 1388 aaKnown RBP23.94■■□□□ 1.42
EPHB4-204ENST00000477446 STK26Q9P289 416 aa23.94■■□□□ 1.42
EPHB4-204ENST00000477446 LRPPRCP42704 1394 aaKnown RBP23.93■■□□□ 1.42
EPHB4-204ENST00000477446 ILDR1Q86SU0 546 aaPredicted RBP23.93■■□□□ 1.42
EPHB4-204ENST00000477446 LTBP4Q8N2S1 1624 aa23.91■■□□□ 1.42
EPHB4-204ENST00000477446 ABCC11Q96J66 1382 aa23.9■■□□□ 1.42
EPHB4-204ENST00000477446 KNDC1Q76NI1 1749 aa23.9■■□□□ 1.42
EPHB4-204ENST00000477446 GPRASP1Q5JY77 1395 aa23.89■■□□□ 1.42
EPHB4-204ENST00000477446 NKTRP30414 1462 aaKnown RBP23.89■■□□□ 1.41
EPHB4-204ENST00000477446 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.41
EPHB4-204ENST00000477446 TRAK1Q9UPV9 953 aa23.88■■□□□ 1.41
EPHB4-204ENST00000477446 TECPR2O15040 1411 aa23.88■■□□□ 1.41
EPHB4-204ENST00000477446 CPS1P31327 1500 aa23.88■■□□□ 1.41
EPHB4-204ENST00000477446 CARD11Q9BXL7 1154 aa23.86■■□□□ 1.41
EPHB4-204ENST00000477446 ROBO2Q9HCK4 1378 aa23.86■■□□□ 1.41
EPHB4-204ENST00000477446 PTCH1Q13635 1447 aa23.86■■□□□ 1.41
EPHB4-204ENST00000477446 PROSER2Q86WR7 435 aaPredicted RBP23.85■■□□□ 1.41
EPHB4-204ENST00000477446 LRRC7Q96NW7 1537 aa23.84■■□□□ 1.41
EPHB4-204ENST00000477446 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
EPHB4-204ENST00000477446 RBM33Q96EV2 1170 aaKnown RBP23.83■■□□□ 1.41
EPHB4-204ENST00000477446 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
EPHB4-204ENST00000477446 SIRT1Q96EB6 747 aa23.82■■□□□ 1.4
EPHB4-204ENST00000477446 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
EPHB4-204ENST00000477446 WAPLQ7Z5K2 1190 aa23.82■■□□□ 1.4
EPHB4-204ENST00000477446 FAM135BQ49AJ0 1406 aa23.81■■□□□ 1.4
EPHB4-204ENST00000477446 TMEM94Q12767 1356 aa23.8■■□□□ 1.4
EPHB4-204ENST00000477446 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
EPHB4-204ENST00000477446 PLEKHH1Q9ULM0 1364 aa23.8■■□□□ 1.4
EPHB4-204ENST00000477446 POGKQ9P215 609 aa23.78■■□□□ 1.4
EPHB4-204ENST00000477446 SAFB2Q14151 953 aaKnown RBP eCLIP23.76■■□□□ 1.39
EPHB4-204ENST00000477446 NCOA3Q9Y6Q9 1424 aa23.75■■□□□ 1.39
EPHB4-204ENST00000477446 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.75■■□□□ 1.39
EPHB4-204ENST00000477446 EIF3AQ14152 1382 aaKnown RBP23.74■■□□□ 1.39
EPHB4-204ENST00000477446 NALCNQ8IZF0 1738 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms