RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DIAPH3Q9NSV4 1193 aa22.81■■□□□ 1.24
VARS2-209ENST00000477288 EVC2Q86UK5 1308 aa22.81■■□□□ 1.24
VARS2-209ENST00000477288 SETQ01105 290 aaPredicted RBP22.81■■□□□ 1.24
VARS2-209ENST00000477288 CGNL1Q0VF96 1302 aa22.8■■□□□ 1.24
VARS2-209ENST00000477288 APPP05067 770 aa22.8■■□□□ 1.24
VARS2-209ENST00000477288 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
VARS2-209ENST00000477288 KIF15Q9NS87 1388 aa22.8■■□□□ 1.24
VARS2-209ENST00000477288 VGFO15240 615 aaPredicted RBP22.79■■□□□ 1.24
VARS2-209ENST00000477288 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
VARS2-209ENST00000477288 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
VARS2-209ENST00000477288 PSME1Q06323 249 aa22.78■■□□□ 1.24
VARS2-209ENST00000477288 LRRFIP1Q32MZ4 808 aaKnown RBP22.78■■□□□ 1.24
VARS2-209ENST00000477288 CNKSR2Q8WXI2 1034 aa22.78■■□□□ 1.24
VARS2-209ENST00000477288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.78■■□□□ 1.24
VARS2-209ENST00000477288 DDX11L8A8MPP1 907 aa22.78■■□□□ 1.24
VARS2-209ENST00000477288 ST20-MTHFSA0A0A6YYL1 179 aa22.77■■□□□ 1.24
VARS2-209ENST00000477288 CWC22Q9HCG8 908 aaKnown RBP22.77■■□□□ 1.24
VARS2-209ENST00000477288 DDX49Q9Y6V7 483 aaKnown RBP22.77■■□□□ 1.24
VARS2-209ENST00000477288 ZNF592Q92610 1267 aa22.77■■□□□ 1.24
VARS2-209ENST00000477288 CHMP4CQ96CF2 233 aa22.77■■□□□ 1.24
VARS2-209ENST00000477288 MYBBP1AQ9BQG0 1328 aaKnown RBP22.76■■□□□ 1.23
VARS2-209ENST00000477288 UACAQ9BZF9 1416 aa22.76■■□□□ 1.23
VARS2-209ENST00000477288 TRIM29Q14134 588 aa22.76■■□□□ 1.23
VARS2-209ENST00000477288 CCDC70Q6NSX1 233 aa22.75■■□□□ 1.23
VARS2-209ENST00000477288 ZKSCAN2Q63HK3 967 aa22.75■■□□□ 1.23
VARS2-209ENST00000477288 SLC4A3P48751 1232 aa22.74■■□□□ 1.23
VARS2-209ENST00000477288 CPLX2Q6PUV4 134 aaKnown RBP22.74■■□□□ 1.23
VARS2-209ENST00000477288 SAMD1Q6SPF0 538 aaPredicted RBP22.73■■□□□ 1.23
VARS2-209ENST00000477288 IGF1RP08069 1367 aa22.73■■□□□ 1.23
VARS2-209ENST00000477288 IFIT2P09913 472 aaKnown RBP22.73■■□□□ 1.23
VARS2-209ENST00000477288 PTPRGP23470 1445 aa22.72■■□□□ 1.23
VARS2-209ENST00000477288 ATP6V1DQ9Y5K8 247 aa22.72■■□□□ 1.23
VARS2-209ENST00000477288 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
VARS2-209ENST00000477288 PLIN1O60240 522 aa22.71■■□□□ 1.23
VARS2-209ENST00000477288 RUFY2Q8WXA3 655 aa22.71■■□□□ 1.23
VARS2-209ENST00000477288 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.23
VARS2-209ENST00000477288 DDX58O95786 925 aaKnown RBP22.69■■□□□ 1.22
VARS2-209ENST00000477288 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
VARS2-209ENST00000477288 E9PSI1 815 aa22.69■■□□□ 1.22
VARS2-209ENST00000477288 CPLX1O14810 134 aa22.69■■□□□ 1.22
VARS2-209ENST00000477288 CCDC47Q96A33 483 aaKnown RBP22.68■■□□□ 1.22
VARS2-209ENST00000477288 NFXL1Q6ZNB6 911 aa22.68■■□□□ 1.22
VARS2-209ENST00000477288 GPS2Q13227 327 aa22.68■■□□□ 1.22
VARS2-209ENST00000477288 DIAPH1O60610 1272 aaKnown RBP22.67■■□□□ 1.22
VARS2-209ENST00000477288 ZKSCAN1P17029 563 aaPredicted RBP22.67■■□□□ 1.22
VARS2-209ENST00000477288 RBM33Q96EV2 1170 aaKnown RBP22.67■■□□□ 1.22
VARS2-209ENST00000477288 IPO7O95373 1038 aaKnown RBP22.67■■□□□ 1.22
VARS2-209ENST00000477288 COG6Q9Y2V7 657 aa22.67■■□□□ 1.22
VARS2-209ENST00000477288 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
VARS2-209ENST00000477288 DHX57Q6P158 1386 aaKnown RBP22.66■■□□□ 1.22
VARS2-209ENST00000477288 TRDNQ13061 729 aa22.66■■□□□ 1.22
VARS2-209ENST00000477288 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
VARS2-209ENST00000477288 CENPQQ7L2Z9 268 aaPredicted RBP22.66■■□□□ 1.22
VARS2-209ENST00000477288 CCDC43Q96MW1 224 aaKnown RBP22.66■■□□□ 1.22
VARS2-209ENST00000477288 G3BP1Q13283 466 aaKnown RBP eCLIP22.66■■□□□ 1.221e-6■■□□□ 13
VARS2-209ENST00000477288 FOSBP53539 338 aa22.65■■□□□ 1.22
VARS2-209ENST00000477288 HSP90AA2PQ14568 343 aaPredicted RBP22.65■■□□□ 1.22
VARS2-209ENST00000477288 TSHZ2Q9NRE2 1034 aa22.65■■□□□ 1.22
VARS2-209ENST00000477288 FKBP5Q13451 457 aaPredicted RBP22.64■■□□□ 1.22
VARS2-209ENST00000477288 ANKRD20A12PQ8NF67 263 aa22.64■■□□□ 1.21
VARS2-209ENST00000477288 ERICH2A1L162 156 aa22.64■■□□□ 1.21
VARS2-209ENST00000477288 RIPK4P57078 832 aa22.63■■□□□ 1.21
VARS2-209ENST00000477288 ATF3P18847 181 aa22.62■■□□□ 1.21
VARS2-209ENST00000477288 FAM161AQ3B820 660 aa22.62■■□□□ 1.21
VARS2-209ENST00000477288 BICD2Q8TD16 824 aa22.62■■□□□ 1.21
VARS2-209ENST00000477288 CRBNQ96SW2 442 aa22.62■■□□□ 1.21
VARS2-209ENST00000477288 APAF1O14727 1248 aa22.61■■□□□ 1.21
VARS2-209ENST00000477288 FYB1O15117 783 aa22.61■■□□□ 1.21
VARS2-209ENST00000477288 SKOR2Q2VWA4 1001 aaPredicted RBP22.61■■□□□ 1.21
VARS2-209ENST00000477288 ZNF771Q7L3S4 317 aaPredicted RBP22.61■■□□□ 1.21
VARS2-209ENST00000477288 HOMER1Q86YM7 354 aa22.61■■□□□ 1.21
VARS2-209ENST00000477288 RAPGEF4Q8WZA2 1011 aa22.61■■□□□ 1.21
VARS2-209ENST00000477288 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
VARS2-209ENST00000477288 REC8O95072 547 aa22.59■■□□□ 1.21
VARS2-209ENST00000477288 NAP1L1P55209 391 aaKnown RBP22.59■■□□□ 1.21
VARS2-209ENST00000477288 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.58■■□□□ 1.212e-6■■■■■ 46.8
VARS2-209ENST00000477288 TSPYL4Q9UJ04 414 aa22.58■■□□□ 1.21
VARS2-209ENST00000477288 AIMP1Q12904 312 aaKnown RBP22.58■■□□□ 1.2
VARS2-209ENST00000477288 RNF20Q5VTR2 975 aa22.58■■□□□ 1.2
VARS2-209ENST00000477288 EXOC6Q8TAG9 804 aa22.58■■□□□ 1.2
VARS2-209ENST00000477288 API5Q9BZZ5 524 aaKnown RBP22.58■■□□□ 1.2
VARS2-209ENST00000477288 PDE4AP27815 886 aa22.57■■□□□ 1.2
VARS2-209ENST00000477288 CCDC27Q2M243 656 aa22.57■■□□□ 1.2
VARS2-209ENST00000477288 NUTM2GQ5VZR2 741 aa22.57■■□□□ 1.2
VARS2-209ENST00000477288 DDX19BQ9UMR2 479 aa22.57■■□□□ 1.2
VARS2-209ENST00000477288 HOOK1Q9UJC3 728 aaKnown RBP22.57■■□□□ 1.2
VARS2-209ENST00000477288 RIC3Q7Z5B4 369 aa22.57■■□□□ 1.2
VARS2-209ENST00000477288 NEUROD6Q96NK8 337 aa22.56■■□□□ 1.2
VARS2-209ENST00000477288 NLRP2Q9NX02 1062 aa22.56■■□□□ 1.2
VARS2-209ENST00000477288 VPS37CA5D8V6 355 aaPredicted RBP22.55■■□□□ 1.2
VARS2-209ENST00000477288 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
VARS2-209ENST00000477288 CT47A1Q5JQC4 288 aaPredicted RBP22.55■■□□□ 1.2
VARS2-209ENST00000477288 RRP1P56182 461 aaKnown RBP22.55■■□□□ 1.2
VARS2-209ENST00000477288 HMOX1P09601 288 aa22.54■■□□□ 1.2
VARS2-209ENST00000477288 OSCARQ8IYS5 282 aa22.54■■□□□ 1.2
VARS2-209ENST00000477288 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
VARS2-209ENST00000477288 USP47Q96K76 1375 aa22.53■■□□□ 1.2
VARS2-209ENST00000477288 ROCK1Q13464 1354 aa22.53■■□□□ 1.2
VARS2-209ENST00000477288 RRP12Q5JTH9 1297 aaKnown RBP22.53■■□□□ 1.2
VARS2-209ENST00000477288 MTMR7Q9Y216 660 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms