RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 TRAK1Q9UPV9 953 aa9.13□□□□□ -0.95
CCDC30-209ENST00000477155 MROH2AA6NES4 1674 aa9.13□□□□□ -0.95
CCDC30-209ENST00000477155 DISP3Q9P2K9 1392 aa9.13□□□□□ -0.95
CCDC30-209ENST00000477155 VGFO15240 615 aaPredicted RBP9.12□□□□□ -0.95
CCDC30-209ENST00000477155 PPP6R1Q9UPN7 881 aa9.12□□□□□ -0.95
CCDC30-209ENST00000477155 DNAJC5Q9H3Z4 198 aa9.12□□□□□ -0.95
CCDC30-209ENST00000477155 SYNMO15061 1565 aa9.12□□□□□ -0.95
CCDC30-209ENST00000477155 RPGRIP1LQ68CZ1 1315 aa9.11□□□□□ -0.95
CCDC30-209ENST00000477155 ADGRB3O60242 1522 aa9.11□□□□□ -0.95
CCDC30-209ENST00000477155 SCAF1Q9H7N4 1312 aaKnown RBP9.11□□□□□ -0.95
CCDC30-209ENST00000477155 AGLP35573 1532 aa9.11□□□□□ -0.95
CCDC30-209ENST00000477155 C14orf93Q9H972 538 aaKnown RBP9.1□□□□□ -0.95
CCDC30-209ENST00000477155 ZMYM3Q14202 1370 aa9.1□□□□□ -0.95
CCDC30-209ENST00000477155 CEBPAP49715 358 aaPredicted RBP9.1□□□□□ -0.95
CCDC30-209ENST00000477155 MRS2Q9HD23 443 aa9.1□□□□□ -0.95
CCDC30-209ENST00000477155 SCAF11Q99590 1463 aaKnown RBP9.1□□□□□ -0.95
CCDC30-209ENST00000477155 FAM9BQ8IZU0 186 aa9.1□□□□□ -0.95
CCDC30-209ENST00000477155 ARHGEF40Q8TER5 1519 aa9.1□□□□□ -0.95
CCDC30-209ENST00000477155 PANK3Q9H999 370 aa9.09□□□□□ -0.95
CCDC30-209ENST00000477155 STK26Q9P289 416 aa9.09□□□□□ -0.95
CCDC30-209ENST00000477155 GTF3C3Q9Y5Q9 886 aa9.09□□□□□ -0.95
CCDC30-209ENST00000477155 MYOM2P54296 1465 aa9.09□□□□□ -0.95
CCDC30-209ENST00000477155 CLTCQ00610 1675 aaKnown RBP9.09□□□□□ -0.95
CCDC30-209ENST00000477155 ZC3H13Q5T200 1668 aaKnown RBP9.09□□□□□ -0.95
CCDC30-209ENST00000477155 POLR1AO95602 1720 aaPredicted RBP9.09□□□□□ -0.95
CCDC30-209ENST00000477155 REREQ9P2R6 1566 aa9.09□□□□□ -0.95
CCDC30-209ENST00000477155 ERVK-7P63135 1459 aa9.08□□□□□ -0.96
CCDC30-209ENST00000477155 SAFB2Q14151 953 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC30-209ENST00000477155 NEURL4Q96JN8 1562 aa9.08□□□□□ -0.96
CCDC30-209ENST00000477155 PREX1Q8TCU6 1659 aa9.08□□□□□ -0.96
CCDC30-209ENST00000477155 EIF3AQ14152 1382 aaKnown RBP9.07□□□□□ -0.96
CCDC30-209ENST00000477155 PIK3C2GO75747 1445 aa9.07□□□□□ -0.96
CCDC30-209ENST00000477155 LAMC1P11047 1609 aa9.07□□□□□ -0.96
CCDC30-209ENST00000477155 CC2D1BQ5T0F9 858 aaKnown RBP9.07□□□□□ -0.96
CCDC30-209ENST00000477155 PIK3C2BO00750 1634 aa9.06□□□□□ -0.96
CCDC30-209ENST00000477155 NRXN1Q9ULB1 1477 aa9.06□□□□□ -0.96
CCDC30-209ENST00000477155 PER1O15534 1290 aaPredicted RBP9.06□□□□□ -0.96
CCDC30-209ENST00000477155 HNRNPUQ00839 825 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC30-209ENST00000477155 CENPJQ9HC77 1338 aaPredicted RBP9.06□□□□□ -0.96
CCDC30-209ENST00000477155 IFT172Q9UG01 1749 aa9.06□□□□□ -0.96
CCDC30-209ENST00000477155 PPLO60437 1756 aa9.06□□□□□ -0.96
CCDC30-209ENST00000477155 CDCA8Q53HL2 280 aa9.06□□□□□ -0.96
CCDC30-209ENST00000477155 MYO5BQ9ULV0 1848 aa9.05□□□□□ -0.96
CCDC30-209ENST00000477155 BCANQ96GW7 911 aa9.05□□□□□ -0.96
CCDC30-209ENST00000477155 NEXMIFQ5QGS0 1516 aa9.05□□□□□ -0.96
CCDC30-209ENST00000477155 IQGAP1P46940 1657 aa9.05□□□□□ -0.96
CCDC30-209ENST00000477155 SENP3-EIF4A1A0A087X0R7 540 aa9.04□□□□□ -0.96
CCDC30-209ENST00000477155 TMC1Q8TDI8 760 aa9.04□□□□□ -0.96
CCDC30-209ENST00000477155 TMEM131LA2VDJ0 1609 aa9.04□□□□□ -0.96
CCDC30-209ENST00000477155 KIAA1210Q9ULL0 1709 aa9.03□□□□□ -0.96
CCDC30-209ENST00000477155 KNSTRNQ9Y448 316 aa9.03□□□□□ -0.96
CCDC30-209ENST00000477155 TNRQ92752 1358 aa9.02□□□□□ -0.96
CCDC30-209ENST00000477155 A2ML1A8K2U0 1454 aa9.02□□□□□ -0.97
CCDC30-209ENST00000477155 KTN1Q86UP2 1357 aaKnown RBP9.01□□□□□ -0.97
CCDC30-209ENST00000477155 RALBP1Q15311 655 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 POGKQ9P215 609 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 SPATA31D1Q6ZQQ2 1576 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 RIMS2Q9UQ26 1411 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 SLC24A1O60721 1099 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 ADGRB1O14514 1584 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 PRAM1Q96QH2 718 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 SLC12A5Q9H2X9 1139 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 ZFYVE9O95405 1425 aa9.01□□□□□ -0.97
CCDC30-209ENST00000477155 MINK1Q8N4C8 1332 aaPredicted RBP9□□□□□ -0.97
CCDC30-209ENST00000477155 MYBBP1AQ9BQG0 1328 aaKnown RBP9□□□□□ -0.97
CCDC30-209ENST00000477155 CABP2Q9NPB3 220 aa9□□□□□ -0.97
CCDC30-209ENST00000477155 SETBP1Q9Y6X0 1596 aa9□□□□□ -0.97
CCDC30-209ENST00000477155 WAPLQ7Z5K2 1190 aa8.99□□□□□ -0.97
CCDC30-209ENST00000477155 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
CCDC30-209ENST00000477155 SRPK2P78362 688 aaKnown RBP8.99□□□□□ -0.97
CCDC30-209ENST00000477155 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.99□□□□□ -0.97
CCDC30-209ENST00000477155 PNISRQ8TF01 805 aaKnown RBP8.98□□□□□ -0.97
CCDC30-209ENST00000477155 CARD14Q9BXL6 1004 aa8.98□□□□□ -0.97
CCDC30-209ENST00000477155 EVC2Q86UK5 1308 aa8.98□□□□□ -0.97
CCDC30-209ENST00000477155 LTKP29376 864 aa8.98□□□□□ -0.97
CCDC30-209ENST00000477155 AMER1Q5JTC6 1135 aaPredicted RBP8.98□□□□□ -0.97
CCDC30-209ENST00000477155 TXNDC2Q86VQ3 553 aa8.98□□□□□ -0.97
CCDC30-209ENST00000477155 YTHDC2Q9H6S0 1430 aaKnown RBP8.97□□□□□ -0.97
CCDC30-209ENST00000477155 NLRP13Q86W25 1043 aa8.97□□□□□ -0.97
CCDC30-209ENST00000477155 PARD3Q8TEW0 1356 aa8.97□□□□□ -0.97
CCDC30-209ENST00000477155 SBNO2Q9Y2G9 1366 aa8.97□□□□□ -0.97
CCDC30-209ENST00000477155 SLC26A8Q96RN1 970 aa8.96□□□□□ -0.97
CCDC30-209ENST00000477155 ALKQ9UM73 1620 aa8.96□□□□□ -0.97
CCDC30-209ENST00000477155 ASXL1Q8IXJ9 1541 aa8.96□□□□□ -0.98
CCDC30-209ENST00000477155 TMEM2Q9UHN6 1383 aa8.96□□□□□ -0.98
CCDC30-209ENST00000477155 SALL2Q9Y467 1007 aaPredicted RBP8.95□□□□□ -0.98
CCDC30-209ENST00000477155 METP08581 1390 aa8.95□□□□□ -0.98
CCDC30-209ENST00000477155 TNNT2P45379 298 aaPredicted RBP8.95□□□□□ -0.98
CCDC30-209ENST00000477155 KDM5AP29375 1690 aaKnown RBP8.95□□□□□ -0.98
CCDC30-209ENST00000477155 BRD4O60885 1362 aaPredicted RBP8.95□□□□□ -0.98
CCDC30-209ENST00000477155 EID1Q9Y6B2 187 aa8.95□□□□□ -0.98
CCDC30-209ENST00000477155 QRICH2Q9H0J4 1663 aa8.95□□□□□ -0.98
CCDC30-209ENST00000477155 CDK19Q9BWU1 502 aa8.94□□□□□ -0.98
CCDC30-209ENST00000477155 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
CCDC30-209ENST00000477155 PLEKHH1Q9ULM0 1364 aa8.94□□□□□ -0.98
CCDC30-209ENST00000477155 PTPRMP28827 1452 aa8.93□□□□□ -0.98
CCDC30-209ENST00000477155 THEMISQ8N1K5 641 aaPredicted RBP8.93□□□□□ -0.98
CCDC30-209ENST00000477155 MYO3AQ8NEV4 1616 aa8.93□□□□□ -0.98
CCDC30-209ENST00000477155 ARHGEF28Q8N1W1 1705 aaKnown RBP8.93□□□□□ -0.98
CCDC30-209ENST00000477155 FER1L4A9Z1Z3 1794 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms