RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 MED14O60244 1454 aa18.6■□□□□ 0.57
APTX-220ENST00000476858 SCAF11Q99590 1463 aaKnown RBP18.6■□□□□ 0.57
APTX-220ENST00000476858 CHGAP10645 457 aaKnown RBP18.6■□□□□ 0.57
APTX-220ENST00000476858 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
APTX-220ENST00000476858 MPHOSPH9Q99550 1183 aa18.6■□□□□ 0.57
APTX-220ENST00000476858 TRPM2O94759 1503 aa18.59■□□□□ 0.57
APTX-220ENST00000476858 NUTM2DQ5VT03 806 aaPredicted RBP18.59■□□□□ 0.57
APTX-220ENST00000476858 ZFYVE9O95405 1425 aa18.58■□□□□ 0.57
APTX-220ENST00000476858 IQGAP1P46940 1657 aa18.58■□□□□ 0.57
APTX-220ENST00000476858 RIMS2Q9UQ26 1411 aa18.56■□□□□ 0.56
APTX-220ENST00000476858 STRCP1A6NGW2 1772 aa18.54■□□□□ 0.56
APTX-220ENST00000476858 CERKQ8TCT0 537 aa18.52■□□□□ 0.56
APTX-220ENST00000476858 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
APTX-220ENST00000476858 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
APTX-220ENST00000476858 EID1Q9Y6B2 187 aa18.5■□□□□ 0.55
APTX-220ENST00000476858 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
APTX-220ENST00000476858 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
APTX-220ENST00000476858 KIF1BO60333 1816 aa18.46■□□□□ 0.55
APTX-220ENST00000476858 PLEKHG1Q9ULL1 1385 aa18.45■□□□□ 0.54
APTX-220ENST00000476858 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
APTX-220ENST00000476858 ADAMTS13Q76LX8 1427 aa18.45■□□□□ 0.54
APTX-220ENST00000476858 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
APTX-220ENST00000476858 HRCP23327 699 aa18.44■□□□□ 0.54
APTX-220ENST00000476858 SPATA31E1Q6ZUB1 1445 aa18.43■□□□□ 0.54
APTX-220ENST00000476858 PPP1R15AO75807 674 aaPredicted RBP18.43■□□□□ 0.54
APTX-220ENST00000476858 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
APTX-220ENST00000476858 CCDC144AA2RUR9 1427 aa18.42■□□□□ 0.54
APTX-220ENST00000476858 BCANQ96GW7 911 aa18.42■□□□□ 0.54
APTX-220ENST00000476858 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
APTX-220ENST00000476858 RGL3Q3MIN7 710 aa18.41■□□□□ 0.54
APTX-220ENST00000476858 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
APTX-220ENST00000476858 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
APTX-220ENST00000476858 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
APTX-220ENST00000476858 LRRC7Q96NW7 1537 aa18.39■□□□□ 0.54
APTX-220ENST00000476858 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
APTX-220ENST00000476858 PPLO60437 1756 aa18.38■□□□□ 0.53
APTX-220ENST00000476858 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
APTX-220ENST00000476858 FBXO41Q8TF61 875 aa18.37■□□□□ 0.53
APTX-220ENST00000476858 CPS1P31327 1500 aa18.37■□□□□ 0.53
APTX-220ENST00000476858 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
APTX-220ENST00000476858 SETBP1Q9Y6X0 1596 aa18.36■□□□□ 0.53
APTX-220ENST00000476858 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
APTX-220ENST00000476858 ALKQ9UM73 1620 aa18.35■□□□□ 0.53
APTX-220ENST00000476858 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
APTX-220ENST00000476858 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
APTX-220ENST00000476858 METP08581 1390 aa18.34■□□□□ 0.53
APTX-220ENST00000476858 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
APTX-220ENST00000476858 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
APTX-220ENST00000476858 TBX22Q9Y458 520 aa18.34■□□□□ 0.53
APTX-220ENST00000476858 CHD2O14647 1828 aaKnown RBP18.33■□□□□ 0.53
APTX-220ENST00000476858 SETD1AO15047 1707 aaKnown RBP18.33■□□□□ 0.52
APTX-220ENST00000476858 KCNA6P17658 529 aa18.33■□□□□ 0.52
APTX-220ENST00000476858 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
APTX-220ENST00000476858 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
APTX-220ENST00000476858 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
APTX-220ENST00000476858 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
APTX-220ENST00000476858 DHX57Q6P158 1386 aaKnown RBP18.29■□□□□ 0.52
APTX-220ENST00000476858 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
APTX-220ENST00000476858 XRN1Q8IZH2 1706 aaKnown RBP18.27■□□□□ 0.52
APTX-220ENST00000476858 VGFO15240 615 aaPredicted RBP18.27■□□□□ 0.52
APTX-220ENST00000476858 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.52
APTX-220ENST00000476858 ASXL1Q8IXJ9 1541 aa18.27■□□□□ 0.51
APTX-220ENST00000476858 SIN3AQ96ST3 1273 aa18.26■□□□□ 0.51
APTX-220ENST00000476858 AMOTL2Q9Y2J4 779 aa18.26■□□□□ 0.51
APTX-220ENST00000476858 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
APTX-220ENST00000476858 PIK3C2GO75747 1445 aa18.23■□□□□ 0.51
APTX-220ENST00000476858 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
APTX-220ENST00000476858 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
APTX-220ENST00000476858 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
APTX-220ENST00000476858 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
APTX-220ENST00000476858 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
APTX-220ENST00000476858 MYOM2P54296 1465 aa18.21■□□□□ 0.51
APTX-220ENST00000476858 PIP4K2BP78356 416 aa18.21■□□□□ 0.51
APTX-220ENST00000476858 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
APTX-220ENST00000476858 DCAF11Q8TEB1 546 aa18.2■□□□□ 0.5
APTX-220ENST00000476858 ROBO2Q9HCK4 1378 aa18.19■□□□□ 0.5
APTX-220ENST00000476858 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
APTX-220ENST00000476858 STK26Q9P289 416 aa18.16■□□□□ 0.5
APTX-220ENST00000476858 C14orf93Q9H972 538 aaKnown RBP18.15■□□□□ 0.5
APTX-220ENST00000476858 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
APTX-220ENST00000476858 TOM1O60784 492 aa18.14■□□□□ 0.49
APTX-220ENST00000476858 NALCNQ8IZF0 1738 aa18.14■□□□□ 0.49
APTX-220ENST00000476858 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
APTX-220ENST00000476858 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
APTX-220ENST00000476858 WAPLQ7Z5K2 1190 aa18.12■□□□□ 0.49
APTX-220ENST00000476858 L3MBTL2Q969R5 705 aa18.12■□□□□ 0.49
APTX-220ENST00000476858 HSPA1LP34931 641 aa18.11■□□□□ 0.49
APTX-220ENST00000476858 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
APTX-220ENST00000476858 LRPPRCP42704 1394 aaKnown RBP18.11■□□□□ 0.49
APTX-220ENST00000476858 MSH6P52701 1360 aa18.11■□□□□ 0.49
APTX-220ENST00000476858 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
APTX-220ENST00000476858 YTHDC2Q9H6S0 1430 aaKnown RBP18.11■□□□□ 0.49
APTX-220ENST00000476858 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
APTX-220ENST00000476858 TECPR2O15040 1411 aa18.08■□□□□ 0.49
APTX-220ENST00000476858 NCOA3Q9Y6Q9 1424 aa18.08■□□□□ 0.49
APTX-220ENST00000476858 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.48
APTX-220ENST00000476858 LAMC1P11047 1609 aa18.08■□□□□ 0.48
APTX-220ENST00000476858 ADGRL3Q9HAR2 1447 aa18.07■□□□□ 0.48
APTX-220ENST00000476858 KNDC1Q76NI1 1749 aa18.07■□□□□ 0.48
APTX-220ENST00000476858 ROBO1Q9Y6N7 1651 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms